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The map label for this gene is yraO [H]

Identifier: 145294129

GI number: 145294129

Start: 97373

End: 98953

Strand: Reverse

Name: yraO [H]

Synonym: cgR_0087

Alternate gene names: 145294129

Gene position: 98953-97373 (Counterclockwise)

Preceding gene: 145294132

Following gene: 145294128

Centisome position: 2.99

GC content: 59.46

Gene sequence:

>1581_bases
ATGAGCAGCTCAACACTTCTCCTGGCTTCAGGACAAGTCACGGCCTTAGCCGCTGACTACTCCCTGAGCCACACCCCATC
AGATGGCATCCTGGTAGTCCTCGGCTTCGCCATGATCCTCACCTTCATGACACTGATCATGCTGGGTCGCATGACCCCAA
TGGTGGCCATGCTGTTGGTCCCCACCATCTTCGGCCTTATCGCAGGCGCAGGACTCGGCCTTGGTGACATGGCACTTGAT
GCCATCAAGGACATGGCACCCACCGCGGCACTCCTGATGTTCGCGATTATGTTCTTCGGAATCATGATTGACGTCGGACT
TTTCGACCCTCTAATCCGCGGCATCACCAGAGTCCTCCACGACGACCCCGCAAAAGTCGTACTCGGCACCGCAATCTTGG
CCGGTGTAGTCTCCCTCGACGGCGACGGTTCCACCACCTTCATCATCACCACCTCCGCAATGCTGCCCATCTACCTGCGC
CTAGGCATGAGCCCCGTGGTTCTCACCTGCACCGCTGGCCTGATCAACGGCACCATGAACATCCTTCCTTGGGGTGGCCC
AACCGTTCGCGCCGCAGCAGCACTTGGCCTTGAACCAGCCGATGTTTTCGTACCAATGGTTCCATCGCTTATCGCCGGCG
TTGTTATCTGTCTGCTGTTCGCATGGTTCCTCGGTCTCTCCGAGCGCAAGCGCCTGGGCAAGATCGATTCCTCCCGCTTC
GGTGGCCCAGGACTCGACGCCCCAGAAACAGGAACGGGCTCAGGCTCCAGCCCCAACAAGAAGGGCTTCCCAGGCCTCGG
CGGACTGGGCAAGGCAAAGAACGCTCCAAAGCCAGGACCTACTGGTGGCGTGCTTGTTGAAGATCGCGAAGTTGAAACCG
AGCAGCACATCAACCTCGACGACTCCACCCTCACCGAGAACATGACCGACACTCTGCTCGATCCACACCGCGCAACACTT
CGACCGAAGCTGTTCTGGTTCAACGCAGCCCTAACCCTGGTCGTCATGGTTCTCCTGGTTGCCGATATCTTCCCACTGGC
CTTCGTCTTCATGGCTGGCGCCGGACTGGCACTTGCAGTGAACTTCCCTAAGGTCAAGGACCAAGCAACCGAAATGCTGG
CGCACTCTTCCAGCATCGTCGGCGTTGTCTCCATGGTTCTCGCCGCAGGCGTCCTAGTCGGCGTCCTCAGCGGCACCGGC
ATGGTCGACGCGATGGCTACCTGGATCACCACCGTCATTCCGAACGCAATGGGCCCTCACCTGGCAGTTATCACCGGCCT
GCTATCCATCCCGATGACGTTCTTCATGTCCAACGACGCCTTCTACTTCGGCATCCTCCCAGTCCTTGCAGAAAGTGCTT
CCCACTTCGGCATTGAGCCCGTGGAAATGGCCCGCGCATCCATCACTGGCCAGCCCGTTCACATGCAGAGCCCGCTGGTC
CCAGCGATCCTCCTGCTGGTTTCCCTCGCCAACGTCAACCTTGGCGACCACCACAAGAAGGTTCTGTGGCGCGCCTGCAT
CGTGTCCATCGCGATGCTCGCCGTAGCCCTCTTCATCGGCGTCGTGCCACTCAGCGCATAA

Upstream 100 bases:

>100_bases
ACCAAACACTTCAGTGCGTGACACACGCCACCTTATACTCCCACAAGCAACACAGAACACTCGGAATCTCAAAGTTTCGA
GAAACACAGAAAGGGCAGCA

Downstream 100 bases:

>100_bases
AATAGCTTTTCGACGCCAAACCCCTCCTCCCCGTGTTGTTCTGTGCACGGGGAAGAGGGGTTTTCTAATATGATCACCCA
CTATGAGCAATCGTGAGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MSSSTLLLASGQVTALAADYSLSHTPSDGILVVLGFAMILTFMTLIMLGRMTPMVAMLLVPTIFGLIAGAGLGLGDMALD
AIKDMAPTAALLMFAIMFFGIMIDVGLFDPLIRGITRVLHDDPAKVVLGTAILAGVVSLDGDGSTTFIITTSAMLPIYLR
LGMSPVVLTCTAGLINGTMNILPWGGPTVRAAAALGLEPADVFVPMVPSLIAGVVICLLFAWFLGLSERKRLGKIDSSRF
GGPGLDAPETGTGSGSSPNKKGFPGLGGLGKAKNAPKPGPTGGVLVEDREVETEQHINLDDSTLTENMTDTLLDPHRATL
RPKLFWFNAALTLVVMVLLVADIFPLAFVFMAGAGLALAVNFPKVKDQATEMLAHSSSIVGVVSMVLAAGVLVGVLSGTG
MVDAMATWITTVIPNAMGPHLAVITGLLSIPMTFFMSNDAFYFGILPVLAESASHFGIEPVEMARASITGQPVHMQSPLV
PAILLLVSLANVNLGDHHKKVLWRACIVSIAMLAVALFIGVVPLSA

Sequences:

>Translated_526_residues
MSSSTLLLASGQVTALAADYSLSHTPSDGILVVLGFAMILTFMTLIMLGRMTPMVAMLLVPTIFGLIAGAGLGLGDMALD
AIKDMAPTAALLMFAIMFFGIMIDVGLFDPLIRGITRVLHDDPAKVVLGTAILAGVVSLDGDGSTTFIITTSAMLPIYLR
LGMSPVVLTCTAGLINGTMNILPWGGPTVRAAAALGLEPADVFVPMVPSLIAGVVICLLFAWFLGLSERKRLGKIDSSRF
GGPGLDAPETGTGSGSSPNKKGFPGLGGLGKAKNAPKPGPTGGVLVEDREVETEQHINLDDSTLTENMTDTLLDPHRATL
RPKLFWFNAALTLVVMVLLVADIFPLAFVFMAGAGLALAVNFPKVKDQATEMLAHSSSIVGVVSMVLAAGVLVGVLSGTG
MVDAMATWITTVIPNAMGPHLAVITGLLSIPMTFFMSNDAFYFGILPVLAESASHFGIEPVEMARASITGQPVHMQSPLV
PAILLLVSLANVNLGDHHKKVLWRACIVSIAMLAVALFIGVVPLSA
>Mature_525_residues
SSSTLLLASGQVTALAADYSLSHTPSDGILVVLGFAMILTFMTLIMLGRMTPMVAMLLVPTIFGLIAGAGLGLGDMALDA
IKDMAPTAALLMFAIMFFGIMIDVGLFDPLIRGITRVLHDDPAKVVLGTAILAGVVSLDGDGSTTFIITTSAMLPIYLRL
GMSPVVLTCTAGLINGTMNILPWGGPTVRAAAALGLEPADVFVPMVPSLIAGVVICLLFAWFLGLSERKRLGKIDSSRFG
GPGLDAPETGTGSGSSPNKKGFPGLGGLGKAKNAPKPGPTGGVLVEDREVETEQHINLDDSTLTENMTDTLLDPHRATLR
PKLFWFNAALTLVVMVLLVADIFPLAFVFMAGAGLALAVNFPKVKDQATEMLAHSSSIVGVVSMVLAAGVLVGVLSGTGM
VDAMATWITTVIPNAMGPHLAVITGLLSIPMTFFMSNDAFYFGILPVLAESASHFGIEPVEMARASITGQPVHMQSPLVP
AILLLVSLANVNLGDHHKKVLWRACIVSIAMLAVALFIGVVPLSA

Specific function: Transports the free citrate anion [H]

COG id: COG2851

COG function: function code C; H+/citrate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014738
- InterPro:   IPR004680 [H]

Pfam domain/function: PF03600 CitMHS [H]

EC number: NA

Molecular weight: Translated: 54793; Mature: 54662

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSTLLLASGQVTALAADYSLSHTPSDGILVVLGFAMILTFMTLIMLGRMTPMVAMLLV
CCCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PTIFGLIAGAGLGLGDMALDAIKDMAPTAALLMFAIMFFGIMIDVGLFDPLIRGITRVLH
HHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DDPAKVVLGTAILAGVVSLDGDGSTTFIITTSAMLPIYLRLGMSPVVLTCTAGLINGTMN
CCCHHHHHHHHHHHHHHEECCCCCEEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHCCCCE
ILPWGGPTVRAAAALGLEPADVFVPMVPSLIAGVVICLLFAWFLGLSERKRLGKIDSSRF
EECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC
GGPGLDAPETGTGSGSSPNKKGFPGLGGLGKAKNAPKPGPTGGVLVEDREVETEQHINLD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCCC
DSTLTENMTDTLLDPHRATLRPKLFWFNAALTLVVMVLLVADIFPLAFVFMAGAGLALAV
HHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
NFPKVKDQATEMLAHSSSIVGVVSMVLAAGVLVGVLSGTGMVDAMATWITTVIPNAMGPH
ECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCH
LAVITGLLSIPMTFFMSNDAFYFGILPVLAESASHFGIEPVEMARASITGQPVHMQSPLV
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHH
PAILLLVSLANVNLGDHHKKVLWRACIVSIAMLAVALFIGVVPLSA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSSTLLLASGQVTALAADYSLSHTPSDGILVVLGFAMILTFMTLIMLGRMTPMVAMLLV
CCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PTIFGLIAGAGLGLGDMALDAIKDMAPTAALLMFAIMFFGIMIDVGLFDPLIRGITRVLH
HHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DDPAKVVLGTAILAGVVSLDGDGSTTFIITTSAMLPIYLRLGMSPVVLTCTAGLINGTMN
CCCHHHHHHHHHHHHHHEECCCCCEEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHCCCCE
ILPWGGPTVRAAAALGLEPADVFVPMVPSLIAGVVICLLFAWFLGLSERKRLGKIDSSRF
EECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC
GGPGLDAPETGTGSGSSPNKKGFPGLGGLGKAKNAPKPGPTGGVLVEDREVETEQHINLD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCCC
DSTLTENMTDTLLDPHRATLRPKLFWFNAALTLVVMVLLVADIFPLAFVFMAGAGLALAV
HHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
NFPKVKDQATEMLAHSSSIVGVVSMVLAAGVLVGVLSGTGMVDAMATWITTVIPNAMGPH
ECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCH
LAVITGLLSIPMTFFMSNDAFYFGILPVLAESASHFGIEPVEMARASITGQPVHMQSPLV
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHH
PAILLLVSLANVNLGDHHKKVLWRACIVSIAMLAVALFIGVVPLSA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377; 9141695 [H]