| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is bfmBB [H]
Identifier: 162330296
GI number: 162330296
Start: 2426461
End: 2427786
Strand: Reverse
Name: bfmBB [H]
Synonym: GTNG_2305
Alternate gene names: 162330296
Gene position: 2427786-2426461 (Counterclockwise)
Preceding gene: 138895947
Following gene: 138895945
Centisome position: 68.38
GC content: 55.81
Gene sequence:
>1326_bases GTGGCCATCGAACAATTGACGATGCCTCAGCTCGGGGAAAGTGTTACGGAAGGCACAATCAGTAAATGGCTCGTTTCCCC GGGCGACAAAGTGAACAAATACGATCCGGTTGCCGAAGTGATGACTGATAAAGTGAGCGCGGAAATTCCGTCGTCATTTG CCGGCGTCATCCGCGAGTTGATCGCCAAAGAAGGAGAAACGTTGCCGGTCGGCGCCCCGATTTGCACAATCGAAGTCGAA GGCGCTGCACCAGCTCCGGAAGCGAAGCCGACGGAAGAGACAGCAGGAACGAAAACGGAAAATGAAAACAAAGCTCCCGC GGCCAAACAGGCTGGCAAGGCCAACAACGGCCGTTACTCCCCGGCTGTGCTCCGTTTGGCCCAAGAACATGGAATTGACC TTGAACAAGTCAAAGGCACTGGTCTTGGCGGGCGAGTGACGCGCAAAGATTTGCTTAAGTTGATCGAGTCCGGCCAAATT CCGAAAGCGGAAGCGGCAGAACAGGCGGCACCAAAGGTCGAGACGACAGCTCCGGACGTCGCTCCATCTCAGCCGGCTGC TGCCGCACAAACCGCGCCGGTGACGACGTCGACGAAGCCAGCGGTGCCAACGATCGAAGTAGGAGCGGGCGATATCGAAA TTCCGGTCACCCCGGTGCGCAAAGCGATCGCCGCGAACATGCTCCGAAGCAAGCACGAAGCGCCGCACGCATGGACGATG GTCGAAGTCGACGTGACGAACCTTGTCGCTTATCGCGATGCCATCAAAGACGAATTCAAGCGGCGTGAAGGCTTCAACTT GACGTACTTTGCCTTTTTCGTCAAAGCGGTCGCTCAAGCGTTGAAAGAATTCCCGCAGCTGAATTCGGTGTGGGCCGGCG ATAAAATCATCCAGCGCAAGGACATCAACATCTCGATTGCCGTCGCGACCGATGATGCGTTGTTCGTTCCGGTCATCAAG CACGCCGATGAGAAAACGATCAAGGGGATTGCCCGCGAAATCGCCGAACTGGCAGCGAAAACGCGCGCCGGCAAACTCCG TCCGGAAGATATGCAAGGCGGCACGTTCACCGTCAACAACACTGGCGCGTTTGGCTCAGTGCAGTCAATGGGTATTATCA ACTACCCGCAAGCTGCCATTTTGCAAGTGGAAACAATCGTCAAACGCCCGGTCGTGAAAGACGGCATGATTGCCATCCGC GACATGGTCAACTTGTGCCTGTCGCTTGACCACCGCGTCCTAGACGGTCTCGTTTGCGGCCGCTTCCTCGCCCGTGTCAA AGCGATTTTGGAAAACATGAACAAAGACAATACACCGGTTTATTAA
Upstream 100 bases:
>100_bases AGGAGTCCCATCCCGTGAAGAGGTTCCCCCCCTGCCCAAAGCGGATGTGGCGGGGGATGTCACGGCAAAGACATTGCAAC AGAGATAGGAGGGTATCGAT
Downstream 100 bases:
>100_bases CGGTCCCCCCATCGCCATCGGTGGCGATGGGGGTTTTTGCATGGTACGATTTCAAACTTCTTTCACAAATGTCATGTATA ATGGAAACAGAAGTCCATGT
Product: branched-chain alpha-keto acid dehydrogenase subunit E2
Products: NA
Alternate protein names: Branched-chain alpha-keto acid dehydrogenase complex component E2; BCKAD-E2; BCKADE2; Dihydrolipoamide acetyltransferase component of branched-chain alpha-keto acid dehydrogenase complex; Dihydrolipoamide branched chain transacylase; Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase [H]
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MAIEQLTMPQLGESVTEGTISKWLVSPGDKVNKYDPVAEVMTDKVSAEIPSSFAGVIRELIAKEGETLPVGAPICTIEVE GAAPAPEAKPTEETAGTKTENENKAPAAKQAGKANNGRYSPAVLRLAQEHGIDLEQVKGTGLGGRVTRKDLLKLIESGQI PKAEAAEQAAPKVETTAPDVAPSQPAAAAQTAPVTTSTKPAVPTIEVGAGDIEIPVTPVRKAIAANMLRSKHEAPHAWTM VEVDVTNLVAYRDAIKDEFKRREGFNLTYFAFFVKAVAQALKEFPQLNSVWAGDKIIQRKDINISIAVATDDALFVPVIK HADEKTIKGIAREIAELAAKTRAGKLRPEDMQGGTFTVNNTGAFGSVQSMGIINYPQAAILQVETIVKRPVVKDGMIAIR DMVNLCLSLDHRVLDGLVCGRFLARVKAILENMNKDNTPVY
Sequences:
>Translated_441_residues MAIEQLTMPQLGESVTEGTISKWLVSPGDKVNKYDPVAEVMTDKVSAEIPSSFAGVIRELIAKEGETLPVGAPICTIEVE GAAPAPEAKPTEETAGTKTENENKAPAAKQAGKANNGRYSPAVLRLAQEHGIDLEQVKGTGLGGRVTRKDLLKLIESGQI PKAEAAEQAAPKVETTAPDVAPSQPAAAAQTAPVTTSTKPAVPTIEVGAGDIEIPVTPVRKAIAANMLRSKHEAPHAWTM VEVDVTNLVAYRDAIKDEFKRREGFNLTYFAFFVKAVAQALKEFPQLNSVWAGDKIIQRKDINISIAVATDDALFVPVIK HADEKTIKGIAREIAELAAKTRAGKLRPEDMQGGTFTVNNTGAFGSVQSMGIINYPQAAILQVETIVKRPVVKDGMIAIR DMVNLCLSLDHRVLDGLVCGRFLARVKAILENMNKDNTPVY >Mature_440_residues AIEQLTMPQLGESVTEGTISKWLVSPGDKVNKYDPVAEVMTDKVSAEIPSSFAGVIRELIAKEGETLPVGAPICTIEVEG AAPAPEAKPTEETAGTKTENENKAPAAKQAGKANNGRYSPAVLRLAQEHGIDLEQVKGTGLGGRVTRKDLLKLIESGQIP KAEAAEQAAPKVETTAPDVAPSQPAAAAQTAPVTTSTKPAVPTIEVGAGDIEIPVTPVRKAIAANMLRSKHEAPHAWTMV EVDVTNLVAYRDAIKDEFKRREGFNLTYFAFFVKAVAQALKEFPQLNSVWAGDKIIQRKDINISIAVATDDALFVPVIKH ADEKTIKGIAREIAELAAKTRAGKLRPEDMQGGTFTVNNTGAFGSVQSMGIINYPQAAILQVETIVKRPVVKDGMIAIRD MVNLCLSLDHRVLDGLVCGRFLARVKAILENMNKDNTPVY
Specific function: The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components:branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltran
COG id: COG0508
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 lipoyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI203098816, Length=457, Percent_Identity=31.9474835886214, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI203098753, Length=455, Percent_Identity=31.8681318681319, Blast_Score=188, Evalue=8e-48, Organism=Homo sapiens, GI31711992, Length=453, Percent_Identity=31.3465783664459, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI110671329, Length=432, Percent_Identity=32.1759259259259, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI19923748, Length=246, Percent_Identity=36.5853658536585, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI260898739, Length=157, Percent_Identity=40.7643312101911, Blast_Score=108, Evalue=1e-23, Organism=Escherichia coli, GI1786946, Length=435, Percent_Identity=32.4137931034483, Blast_Score=226, Evalue=3e-60, Organism=Escherichia coli, GI1786305, Length=446, Percent_Identity=32.9596412556054, Blast_Score=181, Evalue=8e-47, Organism=Caenorhabditis elegans, GI17537937, Length=439, Percent_Identity=30.9794988610478, Blast_Score=191, Evalue=6e-49, Organism=Caenorhabditis elegans, GI25146366, Length=428, Percent_Identity=31.5420560747664, Blast_Score=174, Evalue=9e-44, Organism=Caenorhabditis elegans, GI17560088, Length=462, Percent_Identity=29.004329004329, Blast_Score=162, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17538894, Length=320, Percent_Identity=28.125, Blast_Score=126, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6320352, Length=433, Percent_Identity=30.715935334873, Blast_Score=193, Evalue=5e-50, Organism=Saccharomyces cerevisiae, GI6324258, Length=460, Percent_Identity=28.2608695652174, Blast_Score=136, Evalue=6e-33, Organism=Drosophila melanogaster, GI18859875, Length=438, Percent_Identity=30.1369863013699, Blast_Score=169, Evalue=2e-42, Organism=Drosophila melanogaster, GI20129315, Length=223, Percent_Identity=36.322869955157, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI24582497, Length=223, Percent_Identity=36.322869955157, Blast_Score=152, Evalue=6e-37, Organism=Drosophila melanogaster, GI24645909, Length=220, Percent_Identity=36.8181818181818, Blast_Score=145, Evalue=6e-35,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3096 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003016 - InterPro: IPR001078 - InterPro: IPR000089 - InterPro: IPR023213 - InterPro: IPR004167 - InterPro: IPR011053 [H]
Pfam domain/function: PF00198 2-oxoacid_dh; PF00364 Biotin_lipoyl; PF02817 E3_binding [H]
EC number: =2.3.1.168 [H]
Molecular weight: Translated: 47270; Mature: 47139
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS50968 BIOTINYL_LIPOYL ; PS00189 LIPOYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIEQLTMPQLGESVTEGTISKWLVSPGDKVNKYDPVAEVMTDKVSAEIPSSFAGVIREL CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH IAKEGETLPVGAPICTIEVEGAAPAPEAKPTEETAGTKTENENKAPAAKQAGKANNGRYS HHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHCCCCCCCCCC PAVLRLAQEHGIDLEQVKGTGLGGRVTRKDLLKLIESGQIPKAEAAEQAAPKVETTAPDV HHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC APSQPAAAAQTAPVTTSTKPAVPTIEVGAGDIEIPVTPVRKAIAANMLRSKHEAPHAWTM CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEECCHHHHHHHHHHHHHHHHCCCCCEEEE VEVDVTNLVAYRDAIKDEFKRREGFNLTYFAFFVKAVAQALKEFPQLNSVWAGDKIIQRK EEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHEEEE DINISIAVATDDALFVPVIKHADEKTIKGIAREIAELAAKTRAGKLRPEDMQGGTFTVNN CCEEEEEEECCCCEEHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECC TGAFGSVQSMGIINYPQAAILQVETIVKRPVVKDGMIAIRDMVNLCLSLDHRVLDGLVCG CCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHH RFLARVKAILENMNKDNTPVY HHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AIEQLTMPQLGESVTEGTISKWLVSPGDKVNKYDPVAEVMTDKVSAEIPSSFAGVIREL CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH IAKEGETLPVGAPICTIEVEGAAPAPEAKPTEETAGTKTENENKAPAAKQAGKANNGRYS HHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHCCCCCCCCCC PAVLRLAQEHGIDLEQVKGTGLGGRVTRKDLLKLIESGQIPKAEAAEQAAPKVETTAPDV HHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC APSQPAAAAQTAPVTTSTKPAVPTIEVGAGDIEIPVTPVRKAIAANMLRSKHEAPHAWTM CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEECCHHHHHHHHHHHHHHHHCCCCCEEEE VEVDVTNLVAYRDAIKDEFKRREGFNLTYFAFFVKAVAQALKEFPQLNSVWAGDKIIQRK EEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHEEEE DINISIAVATDDALFVPVIKHADEKTIKGIAREIAELAAKTRAGKLRPEDMQGGTFTVNN CCEEEEEEECCCCEEHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECC TGAFGSVQSMGIINYPQAAILQVETIVKRPVVKDGMIAIRDMVNLCLSLDHRVLDGLVCG CCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHH RFLARVKAILENMNKDNTPVY HHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8504804; 8969508; 9384377; 7961792 [H]