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The map label for this gene is jag [H]

Identifier: 138897068

GI number: 138897068

Start: 3547982

End: 3548638

Strand: Reverse

Name: jag [H]

Synonym: GTNG_3441

Alternate gene names: 138897068

Gene position: 3548638-3547982 (Counterclockwise)

Preceding gene: 138897069

Following gene: 138897067

Centisome position: 99.95

GC content: 54.19

Gene sequence:

>657_bases
GTGAAAGAAGTAACCGCGACTGCCGCAACAGTCGAAGAAGCGGTGGAGTTGGCGCTCGCACAGCTCGGTGTGCCTCGGGA
GCGCGCGAATATCGTCGTAATCGATGAAGGAAAAAAAGGTTGGTTCGGCCTGTTTGGTGGTCGGCCGGCGGTTGTGAAAG
CAGTGCTGAAAATCGATCCGGTTGAGGAGACGGTACGTTTTTTGCAGCAGGTTATCACGCAAATGGGAGCGGAAGGGGCA
AACATTGAAGTCGCCCGCCGCGGCAAGCAAGTGACGCTCCACATTCAAGGAGGGCCGGTCGGTTTGCTGATTGGCAAACA
CGGGCAAACGTTAAACGCGCTTCAGTTTTTGACGCAGCTCGTCGCCAACCGCCATGCCGACGAATACGTGTCGATTGCCG
TCGATGTAGAAAATTACCGCGAACGAAGGAAACAGGCGCTTGTCGAATTAGCACATAAGCTAGCGGCCAGGGTGGTCAAG
ACGGGGAAAGAAGTCAAGCTTGAGCCGATGCCGGCGCATGAGCGGAAAATCATTCATTTGGCACTGGCCGGTAATAAACA
TGTCTCCACCTATTCGATCGGGGTTGACCCACATCGTTCGATCGTCGTTTCGCCAGCAGCAGGCAAAAAATCGTCAAGGA
AAGAGGCACCTCTTTAA

Upstream 100 bases:

>100_bases
CCTTGTCGCTTTACTGGGTTGTCGGAAATATTTTCTCCATTGTGCAAACGTATCTCATTAAAGGGCCCGCTGTTTCTGCC
CATTCAGGAGGAGCGAAAAA

Downstream 100 bases:

>100_bases
ACAACATAGAGGAAGCCTCTCTTTTTTTGGCTTCTATTTCTAGGGCGAAGCGAATGTCTAACATGTTTATGTCTAATACC
ATGTCTTATTTTACGAATGT

Product: Jag protein

Products: NA

Alternate protein names: SpoIIIJ-associated protein [H]

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MKEVTATAATVEEAVELALAQLGVPRERANIVVIDEGKKGWFGLFGGRPAVVKAVLKIDPVEETVRFLQQVITQMGAEGA
NIEVARRGKQVTLHIQGGPVGLLIGKHGQTLNALQFLTQLVANRHADEYVSIAVDVENYRERRKQALVELAHKLAARVVK
TGKEVKLEPMPAHERKIIHLALAGNKHVSTYSIGVDPHRSIVVSPAAGKKSSRKEAPL

Sequences:

>Translated_218_residues
MKEVTATAATVEEAVELALAQLGVPRERANIVVIDEGKKGWFGLFGGRPAVVKAVLKIDPVEETVRFLQQVITQMGAEGA
NIEVARRGKQVTLHIQGGPVGLLIGKHGQTLNALQFLTQLVANRHADEYVSIAVDVENYRERRKQALVELAHKLAARVVK
TGKEVKLEPMPAHERKIIHLALAGNKHVSTYSIGVDPHRSIVVSPAAGKKSSRKEAPL
>Mature_218_residues
MKEVTATAATVEEAVELALAQLGVPRERANIVVIDEGKKGWFGLFGGRPAVVKAVLKIDPVEETVRFLQQVITQMGAEGA
NIEVARRGKQVTLHIQGGPVGLLIGKHGQTLNALQFLTQLVANRHADEYVSIAVDVENYRERRKQALVELAHKLAARVVK
TGKEVKLEPMPAHERKIIHLALAGNKHVSTYSIGVDPHRSIVVSPAAGKKSSRKEAPL

Specific function: Unknown

COG id: COG1847

COG function: function code R; Predicted RNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 R3H domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004087
- InterPro:   IPR015946
- InterPro:   IPR001374 [H]

Pfam domain/function: PF01424 R3H [H]

EC number: NA

Molecular weight: Translated: 23672; Mature: 23672

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: PS51061 R3H

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEVTATAATVEEAVELALAQLGVPRERANIVVIDEGKKGWFGLFGGRPAVVKAVLKIDP
CCCCHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCEEEECCCCHHHHHHHHHCCC
VEETVRFLQQVITQMGAEGANIEVARRGKQVTLHIQGGPVGLLIGKHGQTLNALQFLTQL
HHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHH
VANRHADEYVSIAVDVENYRERRKQALVELAHKLAARVVKTGKEVKLEPMPAHERKIIHL
HHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEE
ALAGNKHVSTYSIGVDPHRSIVVSPAAGKKSSRKEAPL
EEECCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKEVTATAATVEEAVELALAQLGVPRERANIVVIDEGKKGWFGLFGGRPAVVKAVLKIDP
CCCCHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCEEEECCCCHHHHHHHHHCCC
VEETVRFLQQVITQMGAEGANIEVARRGKQVTLHIQGGPVGLLIGKHGQTLNALQFLTQL
HHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHH
VANRHADEYVSIAVDVENYRERRKQALVELAHKLAARVVKTGKEVKLEPMPAHERKIIHL
HHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEE
ALAGNKHVSTYSIGVDPHRSIVVSPAAGKKSSRKEAPL
EEECCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1487728; 1552862; 7584024; 9384377 [H]