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The map label for this gene is ssb [H]

Identifier: 138897055

GI number: 138897055

Start: 3534598

End: 3535092

Strand: Reverse

Name: ssb [H]

Synonym: GTNG_3426

Alternate gene names: 138897055

Gene position: 3535092-3534598 (Counterclockwise)

Preceding gene: 138897056

Following gene: 138897054

Centisome position: 99.57

GC content: 52.53

Gene sequence:

>495_bases
ATGATTAACCGCGTCATTTTGGTCGGCAGGTTAACGAGAGATCCGGAGTTGCGCTACACTCCAAGCGGAGTGGCTGTTGC
CACATTTACGCTCGCGGTCAACCGCCCGTTCACAAACCAGCAGGGCGAGCGTGAAGCTGATTTTATCCAATGTGTTGTTT
GGCGTCGCCAGGCAGAAAACGTCGCTAACTTCTTAAAAAAAGGAAGCTTAGCCGGAGTGGACGGCCGGCTGCAAACTCGC
AGCTATGAAAACCAAGAAGGCCGGCGCGTGTATGTGACGGAAGTGGTGGCTGATAACGTCCAATTTCTTGAGCCAAAAGG
AAGCAACGAGCAACGTGGGGCAGCAGCAGGCGGCTACTATGGGGATCCGTTCCCATTCGGACAAGATCAGAACCACCGAT
ACCCGAACGAAAAAGGGATTGGCCGCATTGATGAAGATCCTTTCGCCAATGACGGCCAACCGATCGATATTTCTGACGAC
GATTTGCCGTTTTAA

Upstream 100 bases:

>100_bases
AAGAATTTGATCGCTTAGCGCGCATTAGCGAAGATATCATCCGTCATATCGTCGTAAAAGAAGAAAAATAATTTTTGGTA
TATGTTAAGAGGTGGTTCTG

Downstream 100 bases:

>100_bases
TTGATAAGGAAGACAGGGACAGAAAGGAGGAAACGGACCATGGCAGGACGGAAAGGTGGACGTGGCAAACGCCGCAAAGT
ATGTTATTTCACGGCGAATA

Product: single-strand DNA-binding protein, phage-like protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MINRVILVGRLTRDPELRYTPSGVAVATFTLAVNRPFTNQQGEREADFIQCVVWRRQAENVANFLKKGSLAGVDGRLQTR
SYENQEGRRVYVTEVVADNVQFLEPKGSNEQRGAAAGGYYGDPFPFGQDQNHRYPNEKGIGRIDEDPFANDGQPIDISDD
DLPF

Sequences:

>Translated_164_residues
MINRVILVGRLTRDPELRYTPSGVAVATFTLAVNRPFTNQQGEREADFIQCVVWRRQAENVANFLKKGSLAGVDGRLQTR
SYENQEGRRVYVTEVVADNVQFLEPKGSNEQRGAAAGGYYGDPFPFGQDQNHRYPNEKGIGRIDEDPFANDGQPIDISDD
DLPF
>Mature_164_residues
MINRVILVGRLTRDPELRYTPSGVAVATFTLAVNRPFTNQQGEREADFIQCVVWRRQAENVANFLKKGSLAGVDGRLQTR
SYENQEGRRVYVTEVVADNVQFLEPKGSNEQRGAAAGGYYGDPFPFGQDQNHRYPNEKGIGRIDEDPFANDGQPIDISDD
DLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=118, Percent_Identity=35.5932203389831, Blast_Score=77, Evalue=4e-16,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18395; Mature: 18395

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINRVILVGRLTRDPELRYTPSGVAVATFTLAVNRPFTNQQGEREADFIQCVVWRRQAEN
CCCEEEEEEECCCCCCCEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
VANFLKKGSLAGVDGRLQTRSYENQEGRRVYVTEVVADNVQFLEPKGSNEQRGAAAGGYY
HHHHHHCCCCCCCCCCEECCCCCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCCCC
GDPFPFGQDQNHRYPNEKGIGRIDEDPFANDGQPIDISDDDLPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MINRVILVGRLTRDPELRYTPSGVAVATFTLAVNRPFTNQQGEREADFIQCVVWRRQAEN
CCCEEEEEEECCCCCCCEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
VANFLKKGSLAGVDGRLQTRSYENQEGRRVYVTEVVADNVQFLEPKGSNEQRGAAAGGYY
HHHHHHCCCCCCCCCCEECCCCCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCCCC
GDPFPFGQDQNHRYPNEKGIGRIDEDPFANDGQPIDISDDDLPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]