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The map label for this gene is tnpC [H]

Identifier: 138897052

GI number: 138897052

Start: 3533209

End: 3533589

Strand: Direct

Name: tnpC [H]

Synonym: GTNG_3423

Alternate gene names: 138897052

Gene position: 3533209-3533589 (Clockwise)

Preceding gene: 138897051

Following gene: 138897053

Centisome position: 99.52

GC content: 39.9

Gene sequence:

>381_bases
ATGGCTAACTATGACCGTAGAGAACAATTGAAAGCCATTCACGCTGCAAGAAAGGCTCTCACCTATCAAAAAGTCGAAAA
AGCCATTAAAAGGCTCATACGAGCCAATGAGAGCATTAATTTTAATAGCGTAGCAAAGGAAGCAGGGGTAGCGAAAGCGA
CACTTTACAACCATCCTGAACTGCGTGAGCGTATTGAAACCTTACGCCAACAACAAGCACAAGCTCCTACTGCGAAACAA
ATAAAGCGAGAAATGAATGAGAGCAACAAAGACGCTCTTATTGAATCGTTGAAACGAAAAATCAAAAAGTTAGAAGACGA
AAACAAGCAATTACGGGAACAGTTAAAAGTAGCTTACGCAGAGGTTTATAAAAAGTTTTAG

Upstream 100 bases:

>100_bases
AAGAATTTAGAACGTTACGAGAAAATTTTGAGCACCATTAAAGAAGGAAATATCATCTTTGGGCGATTAGAACGAATCAA
ACGAAAGCAAGGTGTTTCCA

Downstream 100 bases:

>100_bases
TTTGATGAGAACGGTGTTCTCATCACTTGGTCAACTATCGAGGCAGTATGCTTAACTAAGATAGTTCGTCAAAAAGGAGG
TTTTGATTTTTTTGGAACAT

Product: transposition regulatory protein TnpC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MANYDRREQLKAIHAARKALTYQKVEKAIKRLIRANESINFNSVAKEAGVAKATLYNHPELRERIETLRQQQAQAPTAKQ
IKREMNESNKDALIESLKRKIKKLEDENKQLREQLKVAYAEVYKKF

Sequences:

>Translated_126_residues
MANYDRREQLKAIHAARKALTYQKVEKAIKRLIRANESINFNSVAKEAGVAKATLYNHPELRERIETLRQQQAQAPTAKQ
IKREMNESNKDALIESLKRKIKKLEDENKQLREQLKVAYAEVYKKF
>Mature_125_residues
ANYDRREQLKAIHAARKALTYQKVEKAIKRLIRANESINFNSVAKEAGVAKATLYNHPELRERIETLRQQQAQAPTAKQI
KREMNESNKDALIESLKRKIKKLEDENKQLREQLKVAYAEVYKKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14767; Mature: 14636

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANYDRREQLKAIHAARKALTYQKVEKAIKRLIRANESINFNSVAKEAGVAKATLYNHPE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHH
LRERIETLRQQQAQAPTAKQIKREMNESNKDALIESLKRKIKKLEDENKQLREQLKVAYA
HHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVYKKF
HHHHHC
>Mature Secondary Structure 
ANYDRREQLKAIHAARKALTYQKVEKAIKRLIRANESINFNSVAKEAGVAKATLYNHPE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHH
LRERIETLRQQQAQAPTAKQIKREMNESNKDALIESLKRKIKKLEDENKQLREQLKVAYA
HHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVYKKF
HHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA