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The map label for this gene is yybT [H]

Identifier: 138897048

GI number: 138897048

Start: 3526730

End: 3528706

Strand: Reverse

Name: yybT [H]

Synonym: GTNG_3419

Alternate gene names: 138897048

Gene position: 3528706-3526730 (Counterclockwise)

Preceding gene: 138897049

Following gene: 138897047

Centisome position: 99.39

GC content: 49.57

Gene sequence:

>1977_bases
ATGTCTCATTTTTACGAAAGGAAAACGTACCGTTATCCGTCCTATGCGTTAGCCGCCTTGGCGGTGCTTATGGCTGTTAG
CTTGTTTTATTTTCAATGGATGCTTGGGCTCGTCGGTCTTCTCGGTGTTGGTTTTTTGCTTTATTACGTCATTTGGTCGC
AACGCTCTTTACACAAGGAGCTGCAACAATATATTTCCAACTTGTCATACCGAGTAAAAAAAGTCAGCGAGGAAGCGCTG
ATGCAGATGCCGATCGGTATTCTGCTCCTCGATGAGGAAGACAAAATCGAATGGTCGAACCGGTTTTTAGCAGCTTGTTT
TAAAGAACAGACATTAATTGGGCGTTCGCTCGCTGAACTTTCCGAACCGTTGGCTGCTTTTGTGAAAAAAGGGAAAACCG
ACGAAGAAATCATTGAACTGAATGGAAAACAGCTGAAAGTGATCGTCCACCGCCATGAACGGCTTCTTTACTTTTTCGAT
GTTACTGAGCATATGGAGCTGAGACGGCGTTATGAGATAGAGCGATTGGTGTTGGCGATCATTTTTCTTGATAATTACGA
TGAGATTACCCAAGGAATGGACGATCAAGCGAAGAGCCAAATGAACAGCCTTGTCACGTCCGTATTAAACCGTTGGGCGA
ATGATTACGGCATCTTTTTAAAACGAACGTCCTCCGACCGGTTTATTGCTGTATTAAACGAGCATATATTGACGCAATTG
GAAAAAAGTAAGTTTTCGATTTTGGACGAAGTGCGTGAACAAACGGCAAAACATCAGGCCCAGATTACGTTAAGCATCGG
CATCGGCGCCGGCGTGTCCTCTCTTCCCGAACTTGGGACGCTTGCTCAATCGAGCCTAGACCTAGCGTTAGGACGCGGCG
GCGACCAAGTGGCGATTAAGCAAGGAAACGGAAAAGTCAAGTTTTACGGAGGCAAAACGAATCCGATGGAAAAGCGGACG
CGCGTCCGCGCCCGCGTCATTTCCCATGCGCTTCGCGAACTGATTGCCGAGAGCGATAAAGTGCTCATTATGGGTCACAA
ATACCCGGATATGGACGCGCTTGGAGCCGCCATTGGCATTTTAAAAGTTGTTCAATCGAACCAAAAGGAAGGATTTCTTG
TTGTTGACGCTATGAAAACAGACGCTGGAGCGCAGCGGCTGCTTGAGGAAATGAAAAAACAGGCCGATTTATGGGCAAGA
TGCATCAAGCCAGAACAGGCGCTTGAGCTCATAACGGAAGATACGCTTTTGATCGTTGTTGATACCCATCGGCCGTCGCT
TGTCATTGAGGAACGGCTGTTATATCGTGCCGACCATATCGTCGTCATCGATCACCATCGCCGCGGTGAAGAGTTTATCG
AGGCGCCGATTCTCGTCTATATGGAGCCGTACGCCTCGTCGACGTCTGAGCTTGTCACTGAGTTGTTGGAGTATCAGCCA
AAACGAGTGAAACTTTCGATGCTTGAAGCGACAGCGTTGCTTGCCGGCATTGTCGTTGATACGAAGAGCTTCACGCTCCG
CACCGGTTCACGGACGTTCGATGCGGCTTCATATTTGCGCGCTCAAGGGGCGGATACGGTGCTCGTGCAAAAGCTGCTGC
GGGAAAGCGTGGCCAATTACGTTAAACGGGCAAAATTGATTGAGCGGGCAGCAATCGATGAACATGGCATTGCCATCGCT
AAAGGAGACGAGAACGAAGTGCATGACCAAGTGTTAATCGCGCAAACGGCTGATACGCTTCTCACGTTAAGCGGTGTTGT
CGCTTCGTTCGTCATTTCCAAGCGAGGCGACGGAACAGTCGGCATTAGCGCCCGCTCGCTGGGCGATGTCAATGTGCAAG
TGATTATGGAACGGCTTGGCGGAGGCGGGCACTTAACGAATGCCGCTGCTCAGCTTTCCGATGTGACGGTCGGAGAGGCG
GAGCAGCAGCTGCGTGAAGCGATTCATGACTATTTTGAGGGGGGTAAGCCAGTATGA

Upstream 100 bases:

>100_bases
GTGGCGATATTCGGTATAATTGATTTAGGATTTGATTTGCGCCGCCGCATATAATAATTGGATAAAGTAAGCCATTTTTG
CAGTGTAGGAGCTGACTTGA

Downstream 100 bases:

>100_bases
AGGTCATTTTTTTGAAAGATGTAAAAGGAAAAGGGAAAAAAGGGGAAATCAAAAACGTTGCCGACGGTTATGCGAACAAC
TTTTTGTTCAAACAAGGGTT

Product: DHH subfamily 1 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 658; Mature: 657

Protein sequence:

>658_residues
MSHFYERKTYRYPSYALAALAVLMAVSLFYFQWMLGLVGLLGVGFLLYYVIWSQRSLHKELQQYISNLSYRVKKVSEEAL
MQMPIGILLLDEEDKIEWSNRFLAACFKEQTLIGRSLAELSEPLAAFVKKGKTDEEIIELNGKQLKVIVHRHERLLYFFD
VTEHMELRRRYEIERLVLAIIFLDNYDEITQGMDDQAKSQMNSLVTSVLNRWANDYGIFLKRTSSDRFIAVLNEHILTQL
EKSKFSILDEVREQTAKHQAQITLSIGIGAGVSSLPELGTLAQSSLDLALGRGGDQVAIKQGNGKVKFYGGKTNPMEKRT
RVRARVISHALRELIAESDKVLIMGHKYPDMDALGAAIGILKVVQSNQKEGFLVVDAMKTDAGAQRLLEEMKKQADLWAR
CIKPEQALELITEDTLLIVVDTHRPSLVIEERLLYRADHIVVIDHHRRGEEFIEAPILVYMEPYASSTSELVTELLEYQP
KRVKLSMLEATALLAGIVVDTKSFTLRTGSRTFDAASYLRAQGADTVLVQKLLRESVANYVKRAKLIERAAIDEHGIAIA
KGDENEVHDQVLIAQTADTLLTLSGVVASFVISKRGDGTVGISARSLGDVNVQVIMERLGGGGHLTNAAAQLSDVTVGEA
EQQLREAIHDYFEGGKPV

Sequences:

>Translated_658_residues
MSHFYERKTYRYPSYALAALAVLMAVSLFYFQWMLGLVGLLGVGFLLYYVIWSQRSLHKELQQYISNLSYRVKKVSEEAL
MQMPIGILLLDEEDKIEWSNRFLAACFKEQTLIGRSLAELSEPLAAFVKKGKTDEEIIELNGKQLKVIVHRHERLLYFFD
VTEHMELRRRYEIERLVLAIIFLDNYDEITQGMDDQAKSQMNSLVTSVLNRWANDYGIFLKRTSSDRFIAVLNEHILTQL
EKSKFSILDEVREQTAKHQAQITLSIGIGAGVSSLPELGTLAQSSLDLALGRGGDQVAIKQGNGKVKFYGGKTNPMEKRT
RVRARVISHALRELIAESDKVLIMGHKYPDMDALGAAIGILKVVQSNQKEGFLVVDAMKTDAGAQRLLEEMKKQADLWAR
CIKPEQALELITEDTLLIVVDTHRPSLVIEERLLYRADHIVVIDHHRRGEEFIEAPILVYMEPYASSTSELVTELLEYQP
KRVKLSMLEATALLAGIVVDTKSFTLRTGSRTFDAASYLRAQGADTVLVQKLLRESVANYVKRAKLIERAAIDEHGIAIA
KGDENEVHDQVLIAQTADTLLTLSGVVASFVISKRGDGTVGISARSLGDVNVQVIMERLGGGGHLTNAAAQLSDVTVGEA
EQQLREAIHDYFEGGKPV
>Mature_657_residues
SHFYERKTYRYPSYALAALAVLMAVSLFYFQWMLGLVGLLGVGFLLYYVIWSQRSLHKELQQYISNLSYRVKKVSEEALM
QMPIGILLLDEEDKIEWSNRFLAACFKEQTLIGRSLAELSEPLAAFVKKGKTDEEIIELNGKQLKVIVHRHERLLYFFDV
TEHMELRRRYEIERLVLAIIFLDNYDEITQGMDDQAKSQMNSLVTSVLNRWANDYGIFLKRTSSDRFIAVLNEHILTQLE
KSKFSILDEVREQTAKHQAQITLSIGIGAGVSSLPELGTLAQSSLDLALGRGGDQVAIKQGNGKVKFYGGKTNPMEKRTR
VRARVISHALRELIAESDKVLIMGHKYPDMDALGAAIGILKVVQSNQKEGFLVVDAMKTDAGAQRLLEEMKKQADLWARC
IKPEQALELITEDTLLIVVDTHRPSLVIEERLLYRADHIVVIDHHRRGEEFIEAPILVYMEPYASSTSELVTELLEYQPK
RVKLSMLEATALLAGIVVDTKSFTLRTGSRTFDAASYLRAQGADTVLVQKLLRESVANYVKRAKLIERAAIDEHGIAIAK
GDENEVHDQVLIAQTADTLLTLSGVVASFVISKRGDGTVGISARSLGDVNVQVIMERLGGGGHLTNAAAQLSDVTVGEAE
QQLREAIHDYFEGGKPV

Specific function: Unknown

COG id: COG3887

COG function: function code T; Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000160
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR014528 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: NA

Molecular weight: Translated: 73707; Mature: 73576

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHFYERKTYRYPSYALAALAVLMAVSLFYFQWMLGLVGLLGVGFLLYYVIWSQRSLHKE
CCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LQQYISNLSYRVKKVSEEALMQMPIGILLLDEEDKIEWSNRFLAACFKEQTLIGRSLAEL
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SEPLAAFVKKGKTDEEIIELNGKQLKVIVHRHERLLYFFDVTEHMELRRRYEIERLVLAI
HHHHHHHHHCCCCHHHHHHCCCCEEEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHH
IFLDNYDEITQGMDDQAKSQMNSLVTSVLNRWANDYGIFLKRTSSDRFIAVLNEHILTQL
HHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHH
EKSKFSILDEVREQTAKHQAQITLSIGIGAGVSSLPELGTLAQSSLDLALGRGGDQVAIK
HHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEE
QGNGKVKFYGGKTNPMEKRTRVRARVISHALRELIAESDKVLIMGHKYPDMDALGAAIGI
ECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH
LKVVQSNQKEGFLVVDAMKTDAGAQRLLEEMKKQADLWARCIKPEQALELITEDTLLIVV
HHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEE
DTHRPSLVIEERLLYRADHIVVIDHHRRGEEFIEAPILVYMEPYASSTSELVTELLEYQP
ECCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHCCCEEEEECCCCCCHHHHHHHHHHCCC
KRVKLSMLEATALLAGIVVDTKSFTLRTGSRTFDAASYLRAQGADTVLVQKLLRESVANY
CHHHHHHHHHHHHHHHHHEECCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VKRAKLIERAAIDEHGIAIAKGDENEVHDQVLIAQTADTLLTLSGVVASFVISKRGDGTV
HHHHHHHHHHHCCCCCEEEECCCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHCCCCCEE
GISARSLGDVNVQVIMERLGGGGHLTNAAAQLSDVTVGEAEQQLREAIHDYFEGGKPV
EEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SHFYERKTYRYPSYALAALAVLMAVSLFYFQWMLGLVGLLGVGFLLYYVIWSQRSLHKE
CCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LQQYISNLSYRVKKVSEEALMQMPIGILLLDEEDKIEWSNRFLAACFKEQTLIGRSLAEL
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SEPLAAFVKKGKTDEEIIELNGKQLKVIVHRHERLLYFFDVTEHMELRRRYEIERLVLAI
HHHHHHHHHCCCCHHHHHHCCCCEEEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHH
IFLDNYDEITQGMDDQAKSQMNSLVTSVLNRWANDYGIFLKRTSSDRFIAVLNEHILTQL
HHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHH
EKSKFSILDEVREQTAKHQAQITLSIGIGAGVSSLPELGTLAQSSLDLALGRGGDQVAIK
HHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEE
QGNGKVKFYGGKTNPMEKRTRVRARVISHALRELIAESDKVLIMGHKYPDMDALGAAIGI
ECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH
LKVVQSNQKEGFLVVDAMKTDAGAQRLLEEMKKQADLWARCIKPEQALELITEDTLLIVV
HHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEE
DTHRPSLVIEERLLYRADHIVVIDHHRRGEEFIEAPILVYMEPYASSTSELVTELLEYQP
ECCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHCCCEEEEECCCCCCHHHHHHHHHHCCC
KRVKLSMLEATALLAGIVVDTKSFTLRTGSRTFDAASYLRAQGADTVLVQKLLRESVANY
CHHHHHHHHHHHHHHHHHEECCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VKRAKLIERAAIDEHGIAIAKGDENEVHDQVLIAQTADTLLTLSGVVASFVISKRGDGTV
HHHHHHHHHHHCCCCCEEEECCCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHCCCCCEE
GISARSLGDVNVQVIMERLGGGGHLTNAAAQLSDVTVGEAEQQLREAIHDYFEGGKPV
EEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]