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The map label for this gene is rsfA [H]

Identifier: 138896988

GI number: 138896988

Start: 3467019

End: 3467675

Strand: Direct

Name: rsfA [H]

Synonym: GTNG_3359

Alternate gene names: 138896988

Gene position: 3467019-3467675 (Clockwise)

Preceding gene: 138896984

Following gene: 138896991

Centisome position: 97.65

GC content: 48.55

Gene sequence:

>657_bases
ATGATGAAGCAACGACAAGATGCTTGGACGGAAGAAGACGATTTGTTGTTAGCGGAAACCGTGCTTCGCCATGTACGCGA
AGGAAGCACCCAGCTGAACGCATTTGAAGAAGTTGGTGACAAATTAAACCGGACGTCGGCCGCCTGCGGGTTCCGTTGGA
ACGCGGTCGTCCGCCATCGGTATGAAGAAGCACTCCAGCTAGCGAAAAAGCAACGAAAAGAACGACAGCGTCTGCTTGCC
AAACAAGGCGGTGCTAGAAAGCGCCGTCTGTATGAACCACCGATGCCGTCATTAGAGGAGCTCGGCGACATCATGCAGTT
GCCGGCCGTCATTCCAGCACCGCAGCCTCAATCAGTCACACTTGATCAAGTAATCGCCTTTTTGAAAACGTTCCAATCGC
ACGAACAGAAACGGGAAACACTGATCAAAGAAAATGAACGGCTGCGCCGCGAAATTGAAGAATTAAAGCAAAAAAATAAG
GAACTAGAGGAACAGGTTGCGAAATTAGAAGAAAACTCGTCGACTGTCCAAGAAGATTTTGAGACACTTGTCAAAATCAT
TAATCGAGCACGCAAAATGGTGTTAAAAGAGGAAGAGGAGCGAGGTCTGACCTTCCGCATGGACCCCAATGGAAACTTAG
AGAAAATCGCCGAGTAA

Upstream 100 bases:

>100_bases
CGGCTTTCATTCTTGCAATTTGCCAATCCTGTAAACTTGCAACGTATAAATTTGTTTCTTTTTGCCCATCCTTTTACTAG
AAACGAAAAAGGAGTGGGGA

Downstream 100 bases:

>100_bases
CGAAACAGGATGCCGATGGAGAACTGCGGCATCCTTTTCTTTCGTCGGAAAACGGCGATCTTCTCGATAGCTGGCAAGTC
GGCCTCATTCATCCGAAGCA

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MMKQRQDAWTEEDDLLLAETVLRHVREGSTQLNAFEEVGDKLNRTSAACGFRWNAVVRHRYEEALQLAKKQRKERQRLLA
KQGGARKRRLYEPPMPSLEELGDIMQLPAVIPAPQPQSVTLDQVIAFLKTFQSHEQKRETLIKENERLRREIEELKQKNK
ELEEQVAKLEENSSTVQEDFETLVKIINRARKMVLKEEEERGLTFRMDPNGNLEKIAE

Sequences:

>Translated_218_residues
MMKQRQDAWTEEDDLLLAETVLRHVREGSTQLNAFEEVGDKLNRTSAACGFRWNAVVRHRYEEALQLAKKQRKERQRLLA
KQGGARKRRLYEPPMPSLEELGDIMQLPAVIPAPQPQSVTLDQVIAFLKTFQSHEQKRETLIKENERLRREIEELKQKNK
ELEEQVAKLEENSSTVQEDFETLVKIINRARKMVLKEEEERGLTFRMDPNGNLEKIAE
>Mature_218_residues
MMKQRQDAWTEEDDLLLAETVLRHVREGSTQLNAFEEVGDKLNRTSAACGFRWNAVVRHRYEEALQLAKKQRKERQRLLA
KQGGARKRRLYEPPMPSLEELGDIMQLPAVIPAPQPQSVTLDQVIAFLKTFQSHEQKRETLIKENERLRREIEELKQKNK
ELEEQVAKLEENSSTVQEDFETLVKIINRARKMVLKEEEERGLTFRMDPNGNLEKIAE

Specific function: Seems to improve the efficiency of sporulation by fine- tuning the expression of genes in the sigma F regulon, particularly the timing of their expression. Negatively regulates spoIIR and its own synthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Myb-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014243
- InterPro:   IPR017877 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25534; Mature: 25534

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS50090 MYB_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKQRQDAWTEEDDLLLAETVLRHVREGSTQLNAFEEVGDKLNRTSAACGFRWNAVVRHR
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
YEEALQLAKKQRKERQRLLAKQGGARKRRLYEPPMPSLEELGDIMQLPAVIPAPQPQSVT
HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
LDQVIAFLKTFQSHEQKRETLIKENERLRREIEELKQKNKELEEQVAKLEENSSTVQEDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ETLVKIINRARKMVLKEEEERGLTFRMDPNGNLEKIAE
HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHCC
>Mature Secondary Structure
MMKQRQDAWTEEDDLLLAETVLRHVREGSTQLNAFEEVGDKLNRTSAACGFRWNAVVRHR
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
YEEALQLAKKQRKERQRLLAKQGGARKRRLYEPPMPSLEELGDIMQLPAVIPAPQPQSVT
HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
LDQVIAFLKTFQSHEQKRETLIKENERLRREIEELKQKNKELEEQVAKLEENSSTVQEDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ETLVKIINRARKMVLKEEEERGLTFRMDPNGNLEKIAE
HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377; 10629188 [H]