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The map label for this gene is ynhG [C]

Identifier: 138896847

GI number: 138896847

Start: 3318063

End: 3318560

Strand: Direct

Name: ynhG [C]

Synonym: GTNG_3210

Alternate gene names: 138896847

Gene position: 3318063-3318560 (Clockwise)

Preceding gene: 138896846

Following gene: 138896850

Centisome position: 93.46

GC content: 53.21

Gene sequence:

>498_bases
ATGTACAAACATATTGTCAAACGCGGGGAAACGATCTCTTCCATCGCCAGAGACTACCGCACATCAGTGGAGGCGCTGCT
TCGCGCCAACGGTCTCACCGCCTCATCCATCATCTTCCCTGGACAAGAGATCATCATCCCTCACCTTCCGGCAAAAGGAT
CGATTCCGTACACAATCCATATATCTATCAGCCGCCGACAACTCATATTGAAAGATAGAGGAAGAACGATCCGCACCTAC
CCCGTTGGTGTCGGCAAAATGGTTACCGCCACGCCTGTCGGTGATTTTGTCATCGTCAACCGCCAACCCAACCCGGGCGG
TCCGTTCGGCGCGATGTGGCTCAGCTTATCTAAAATCCATTATGGCATTCACGGTACGAACGACCCGTCCTCCATCGGTA
AATACGTATCGAGAGGGTGCATCCGCATGCACAACAAAGACGTGCTCGAACTCGCTTCCATCGTCCCAAACGGAACGGAA
GTGTTCATCCGGCCGTGA

Upstream 100 bases:

>100_bases
TCCTCATTCGTTTGGCAACCTTTCTAGGATTTTCTCATACATTAATGTATCATGCACCCGAACGGGTTTCTCCGTCGAGC
GAACAAAGGAGTGACAGCCC

Downstream 100 bases:

>100_bases
GGACAACCGAAAGCACCTAATCGCCTACGCGGGAAGTCTTCTTTTAACGAAGTTTCAATATTCATAAGGCCACCATTCGT
CCCTAGCGAACGGACACCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Spore protein YkuD homolog [H]

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MYKHIVKRGETISSIARDYRTSVEALLRANGLTASSIIFPGQEIIIPHLPAKGSIPYTIHISISRRQLILKDRGRTIRTY
PVGVGKMVTATPVGDFVIVNRQPNPGGPFGAMWLSLSKIHYGIHGTNDPSSIGKYVSRGCIRMHNKDVLELASIVPNGTE
VFIRP

Sequences:

>Translated_165_residues
MYKHIVKRGETISSIARDYRTSVEALLRANGLTASSIIFPGQEIIIPHLPAKGSIPYTIHISISRRQLILKDRGRTIRTY
PVGVGKMVTATPVGDFVIVNRQPNPGGPFGAMWLSLSKIHYGIHGTNDPSSIGKYVSRGCIRMHNKDVLELASIVPNGTE
VFIRP
>Mature_165_residues
MYKHIVKRGETISSIARDYRTSVEALLRANGLTASSIIFPGQEIIIPHLPAKGSIPYTIHISISRRQLILKDRGRTIRTY
PVGVGKMVTATPVGDFVIVNRQPNPGGPFGAMWLSLSKIHYGIHGTNDPSSIGKYVSRGCIRMHNKDVLELASIVPNGTE
VFIRP

Specific function: Probable enzyme that may play an important role in cell wall biology [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Spore wall. Note=Probably localized either on the surface of the outer spore membrane and/or in the inner spore coat (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=197, Percent_Identity=28.4263959390863, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 18143; Mature: 18143

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKHIVKRGETISSIARDYRTSVEALLRANGLTASSIIFPGQEIIIPHLPAKGSIPYTIH
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCEEEE
ISISRRQLILKDRGRTIRTYPVGVGKMVTATPVGDFVIVNRQPNPGGPFGAMWLSLSKIH
EEECCEEEEEECCCCEEEEEECCCCCEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHE
YGIHGTNDPSSIGKYVSRGCIRMHNKDVLELASIVPNGTEVFIRP
EECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEC
>Mature Secondary Structure
MYKHIVKRGETISSIARDYRTSVEALLRANGLTASSIIFPGQEIIIPHLPAKGSIPYTIH
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCEEEE
ISISRRQLILKDRGRTIRTYPVGVGKMVTATPVGDFVIVNRQPNPGGPFGAMWLSLSKIH
EEECCEEEEEECCCCEEEEEECCCCCEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHE
YGIHGTNDPSSIGKYVSRGCIRMHNKDVLELASIVPNGTEVFIRP
EECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA