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The map label for this gene is ywqB [H]

Identifier: 138896830

GI number: 138896830

Start: 3298167

End: 3299771

Strand: Direct

Name: ywqB [H]

Synonym: GTNG_3193

Alternate gene names: 138896830

Gene position: 3298167-3299771 (Clockwise)

Preceding gene: 138896829

Following gene: 138896831

Centisome position: 92.9

GC content: 51.96

Gene sequence:

>1605_bases
ATGTTGCAAACAGCCATCTCGAAACCTCTCTTGCAAAAGGCAGCAGCTGATTTGCAAAACGACCTACCGTTTTCCGTTTA
TAAACCCCTCATTCAAAAAGGGCGCGATTTATCACGGCGGGGATTTGTCTATAACGTCATCGTCATCGACAGCGAACGAA
TCAAAGGAAAAGTAGCTGACGTAACCATTCACGATGTCACGCTCGATCTCGCCGACGTCATCGGCCACCATGACTGCCCA
TGCGAGACAGAAGGCCCTTGTTCGCACGTGCTGGCCTTGTTTTTTTACGTCTACGGAAACGTCCTTGACAACGGTGAATT
GCTTCGCCAATGGAAGCAAGCAGAAAAGAAACCACCGCAAACCGTTTCCCCTGCCCCCAAAACATCAACGGTCGCACCAG
CCGAATCGGTCGACGAATGGTGGGAGCAGTTTGCGAAGGCGCTTGATGAGTTTGCCGCCCGCCATCGCCGCCGCGACGAT
TGGCCGTATCGACTCGCCCATCAGCTGTTTCCGGCGCTAGTCAAAGGCGGCCCGAAACATCACGCCGCCCGGGGGTTGTA
TCGGTTTCATGCCGCCTTGTTTTTGTTCCATCATCTCATCGAGTACGGAAAAGAACGCGGTTGGCACCAACGTTTGTTTG
GCTCATACGGGCAATTTTCCTGGCAGCAAGATGTCGAATATATCGCCGATGAACTGTTCGAGACGTTGGAGCGGTTCTCA
TCCAATCCGTCGGCATCAGCGCCTGACCCGCTGATTAAACAAACCGTCCCCTATGTGCGGGACTTATTGCAGATAGCGGA
CTTCTTCCCTTCGCTTATCTACGATCTTTATACGGCGGCTTGGGAGCTGCTGTTCACAACAGAGGCACAACGTTGGCAGG
AAAAAGAGCACTTGCTCCGACTCGCCAAAGAAAAGCGAATTCCACTTGCCTTTTTGGCAGCCGCCCATTTAGCCTTTTTG
CTGAAAGAGGATGAGGAAGCGTTTGCGTTATACCGGGTCTTTCCGGAGAGTGCCGCACCATGTTTTATCGAGTGGACGAA
GCGGCTGATCACCTCCGGTCCGCCCGACCGGTTTGCATCGTTTTGGGCGAAAGGGAAACAAGAGCTTCCTTACTACTTAG
CCGCCCTTCCGGAACCGGAACGAACAAAGTTTGTCAACGAGATCGGCCAGCTGTACGAATCATACGCCCAACAGAACAAC
CGATGGGATGAGTACGAAGCGCTCTTAAACCACTGTTTTCCATACAGCGCCAACCGCTATGTTCAATTTTTGCACCGCCA
AGGACGCTACCAGCACATGATCGACTTGTACTTATGGGCGAATATGACCGCCCATGAAATGGATCCGCAGTTTTTAAAAA
TGCTCGAGAAGCAAGACCCTGCGCTCGTCTTACCGCTTTACCACCGGGCGGTCATACGGTTTGTCGAAGCAAAAAATCGA
CCAAGCTATCGCACAGCTGTTCGCTATTTAAAAAAGCTGCGCACGTGCTATCGGGCGCTGAAACAGACGAACGAGTGGAA
CGCCTATCTCGAACAGTTATGCACCAAGACCGCACGCATGCGTGCGTTTCATGAAGAACTACGGAAAGGAAAATTGCTTC
CATGA

Upstream 100 bases:

>100_bases
AAATGCTCCTTCTTCCCATGGCGAAACGAGCATAGCAACCGTTCGGTCCCCCATGATATAATAAATGGATATTAAGAATG
GACGGAAGGGATGAACCGCT

Downstream 100 bases:

>100_bases
TGGAACAAGCGTTACAGACGATCACCCTTTCGTGTGAGTGGAGTGAGGAACGACAATGCTTTTGGCTCAGCAGTTCATCT
CCCGCGACAAGCTGGGCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MLQTAISKPLLQKAAADLQNDLPFSVYKPLIQKGRDLSRRGFVYNVIVIDSERIKGKVADVTIHDVTLDLADVIGHHDCP
CETEGPCSHVLALFFYVYGNVLDNGELLRQWKQAEKKPPQTVSPAPKTSTVAPAESVDEWWEQFAKALDEFAARHRRRDD
WPYRLAHQLFPALVKGGPKHHAARGLYRFHAALFLFHHLIEYGKERGWHQRLFGSYGQFSWQQDVEYIADELFETLERFS
SNPSASAPDPLIKQTVPYVRDLLQIADFFPSLIYDLYTAAWELLFTTEAQRWQEKEHLLRLAKEKRIPLAFLAAAHLAFL
LKEDEEAFALYRVFPESAAPCFIEWTKRLITSGPPDRFASFWAKGKQELPYYLAALPEPERTKFVNEIGQLYESYAQQNN
RWDEYEALLNHCFPYSANRYVQFLHRQGRYQHMIDLYLWANMTAHEMDPQFLKMLEKQDPALVLPLYHRAVIRFVEAKNR
PSYRTAVRYLKKLRTCYRALKQTNEWNAYLEQLCTKTARMRAFHEELRKGKLLP

Sequences:

>Translated_534_residues
MLQTAISKPLLQKAAADLQNDLPFSVYKPLIQKGRDLSRRGFVYNVIVIDSERIKGKVADVTIHDVTLDLADVIGHHDCP
CETEGPCSHVLALFFYVYGNVLDNGELLRQWKQAEKKPPQTVSPAPKTSTVAPAESVDEWWEQFAKALDEFAARHRRRDD
WPYRLAHQLFPALVKGGPKHHAARGLYRFHAALFLFHHLIEYGKERGWHQRLFGSYGQFSWQQDVEYIADELFETLERFS
SNPSASAPDPLIKQTVPYVRDLLQIADFFPSLIYDLYTAAWELLFTTEAQRWQEKEHLLRLAKEKRIPLAFLAAAHLAFL
LKEDEEAFALYRVFPESAAPCFIEWTKRLITSGPPDRFASFWAKGKQELPYYLAALPEPERTKFVNEIGQLYESYAQQNN
RWDEYEALLNHCFPYSANRYVQFLHRQGRYQHMIDLYLWANMTAHEMDPQFLKMLEKQDPALVLPLYHRAVIRFVEAKNR
PSYRTAVRYLKKLRTCYRALKQTNEWNAYLEQLCTKTARMRAFHEELRKGKLLP
>Mature_534_residues
MLQTAISKPLLQKAAADLQNDLPFSVYKPLIQKGRDLSRRGFVYNVIVIDSERIKGKVADVTIHDVTLDLADVIGHHDCP
CETEGPCSHVLALFFYVYGNVLDNGELLRQWKQAEKKPPQTVSPAPKTSTVAPAESVDEWWEQFAKALDEFAARHRRRDD
WPYRLAHQLFPALVKGGPKHHAARGLYRFHAALFLFHHLIEYGKERGWHQRLFGSYGQFSWQQDVEYIADELFETLERFS
SNPSASAPDPLIKQTVPYVRDLLQIADFFPSLIYDLYTAAWELLFTTEAQRWQEKEHLLRLAKEKRIPLAFLAAAHLAFL
LKEDEEAFALYRVFPESAAPCFIEWTKRLITSGPPDRFASFWAKGKQELPYYLAALPEPERTKFVNEIGQLYESYAQQNN
RWDEYEALLNHCFPYSANRYVQFLHRQGRYQHMIDLYLWANMTAHEMDPQFLKMLEKQDPALVLPLYHRAVIRFVEAKNR
PSYRTAVRYLKKLRTCYRALKQTNEWNAYLEQLCTKTARMRAFHEELRKGKLLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SWIM-type zinc finger [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007527 [H]

Pfam domain/function: PF04434 SWIM [H]

EC number: NA

Molecular weight: Translated: 62416; Mature: 62416

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQTAISKPLLQKAAADLQNDLPFSVYKPLIQKGRDLSRRGFVYNVIVIDSERIKGKVAD
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEECHHHCCEEHE
VTIHDVTLDLADVIGHHDCPCETEGPCSHVLALFFYVYGNVLDNGELLRQWKQAEKKPPQ
EEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
TVSPAPKTSTVAPAESVDEWWEQFAKALDEFAARHRRRDDWPYRLAHQLFPALVKGGPKH
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH
HAARGLYRFHAALFLFHHLIEYGKERGWHQRLFGSYGQFSWQQDVEYIADELFETLERFS
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
SNPSASAPDPLIKQTVPYVRDLLQIADFFPSLIYDLYTAAWELLFTTEAQRWQEKEHLLR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAKEKRIPLAFLAAAHLAFLLKEDEEAFALYRVFPESAAPCFIEWTKRLITSGPPDRFAS
HHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHH
FWAKGKQELPYYLAALPEPERTKFVNEIGQLYESYAQQNNRWDEYEALLNHCFPYSANRY
HHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHH
VQFLHRQGRYQHMIDLYLWANMTAHEMDPQFLKMLEKQDPALVLPLYHRAVIRFVEAKNR
HHHHHHCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCC
PSYRTAVRYLKKLRTCYRALKQTNEWNAYLEQLCTKTARMRAFHEELRKGKLLP
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLQTAISKPLLQKAAADLQNDLPFSVYKPLIQKGRDLSRRGFVYNVIVIDSERIKGKVAD
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEECHHHCCEEHE
VTIHDVTLDLADVIGHHDCPCETEGPCSHVLALFFYVYGNVLDNGELLRQWKQAEKKPPQ
EEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
TVSPAPKTSTVAPAESVDEWWEQFAKALDEFAARHRRRDDWPYRLAHQLFPALVKGGPKH
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH
HAARGLYRFHAALFLFHHLIEYGKERGWHQRLFGSYGQFSWQQDVEYIADELFETLERFS
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
SNPSASAPDPLIKQTVPYVRDLLQIADFFPSLIYDLYTAAWELLFTTEAQRWQEKEHLLR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAKEKRIPLAFLAAAHLAFLLKEDEEAFALYRVFPESAAPCFIEWTKRLITSGPPDRFAS
HHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHH
FWAKGKQELPYYLAALPEPERTKFVNEIGQLYESYAQQNNRWDEYEALLNHCFPYSANRY
HHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHH
VQFLHRQGRYQHMIDLYLWANMTAHEMDPQFLKMLEKQDPALVLPLYHRAVIRFVEAKNR
HHHHHHCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCC
PSYRTAVRYLKKLRTCYRALKQTNEWNAYLEQLCTKTARMRAFHEELRKGKLLP
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]