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The map label for this gene is nbaD

Identifier: 138896793

GI number: 138896793

Start: 3257580

End: 3258590

Strand: Reverse

Name: nbaD

Synonym: GTNG_3156

Alternate gene names: NA

Gene position: 3258590-3257580 (Counterclockwise)

Preceding gene: 138896794

Following gene: 138896792

Centisome position: 91.78

GC content: 55.19

Gene sequence:

>1011_bases
ATGCGAGTAGACTTCCACACCCATATTATTCCGGAAGACCTGCCCGACTTTACCCAGCGGTATCAGGGTGACCGTTGGCC
AGTGCTTAAGCGCACCTGTGCCTGCGGAGCCAACATCATGGTGGCGGGCAAGGTATTCCGCGAAGTGACCGATCAAGTGT
GGAGTCCACAGAAGCGCATCCAGGACATGGAGAGGGAAAAGGTGGATATGCAGGTGATCTCACCGATTCCCGTAACTTTT
TCCTATTGGGCGCCGGTGGAGGAAGCGCTGGCCATGGCCCGCATCCAGAATGATTTTATCGCCGAGGTGGTGAAGCAGTA
CCCAGACCGGTTTATCGGGCTGGGTACGGTGCCGCTGCAGGACGTGGAGATCGCGATACGAGAAATGGATCGTTGCGTGC
ACGAATTAGGGCTCAAGGGGCTGGAGATCGGTACCAACGTTAACGGAGCCAACTTAGATGACCCGGCGCTCTTGCCGTTC
TTTGAAATGTGTGAGCAGTGGAATGTGCCACTGTTTGTCCATCCGTGGGAGACACTGGGACGGGAGCGGATGCCCCTCCA
CAACTTGATGTACACCGTCGGCATGCCGAGCGAGACAGCGCTGGCCGCCGCCAGCCTGATCCTTGGAGGCGTGATGGCGA
AATTCCCCCGCCTGAAAATTTGCTTTGCCCATGGCGGCGGGTCCTTTCCGTACATTCTTGCCCGACTAGATCAGGGATGG
CGGGTATGGCCGCACCTGCGGTTGTTGGATCAACCCCCTAGCTACTATGCCAAAAATTTCTATTTTGACTCGTTGGTGTA
CGAACCAGTCAACATTCAGTACCTGATCGAACGATTTGGTCACGAACGGATTATGATGGGCTCCGACTACCCCTTCCTGC
TTCGGGAGATCCCACCTGGGGAAGCGGTGGATCGGACACTCGAGCTTACGGAAGAACAACATAGGGCGATTTTTGGTGAA
AACGCGTTGCGTTTCCTCAATATGAGTCCGGTAAAGGTGAGTGAAAAATGA

Upstream 100 bases:

>100_bases
TGCAGGTAAAACAGGCGATCGAAGAGTTCAACAGTAGCCTAGAGCTACGCACTTGCAAGAACTGCGGATACGTCATGCCG
CCGGAAGCGAGTGAATGGAA

Downstream 100 bases:

>100_bases
CAGTGCAACGAGTAACACCTGAACAGCGTCTGGAGGAGCTGGGACTCGAGTTGCCCGCTCCCCGTAAGGCCGCTGGCAAC
TATGTCAGTTGCGTGCGGAC

Product: 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase

Products: NA

Alternate protein names: Amidohydrolase; 4-Oxalomesaconate Hydratase; Amidohydrolase Family Protein; Amidohydrolase/Decarboxylase; Metal-Dependent Hydrolase; 2-Amino-3-Carboxymuconate-6-Semialdehyde Decarboxylase; Hydrolase; 2-Amino-3-Carboxylmuconate-6-Semialdehyde Decarboxylase; Amidohydrolase Family; O-Pyrocatechuate Decarboxylase; 2-Amino-3-Carboxymuconate 6-Semialdehyde Decarboxylase; 2-Amino-3-Carboxymuconate-6- Semialdehyde Decarboxylase; Tryptophan 2 3-Dioxygenase; 2 3-Dihydroxybenzoic Acid Decarboxylase; Decarboxylase; Amidase; 5-Carboxyvanillate Decarboxylase; FLDW Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Metal Dependent Hydrolase; Barh Protein; TIM-Barrel Fold Metal-Dependent Hydrolase; Amidohydrolase 2 Family Protein; 5-Carboxy-2-Hydroxymuconate-6-Semialdehyde Decarboxylase

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MRVDFHTHIIPEDLPDFTQRYQGDRWPVLKRTCACGANIMVAGKVFREVTDQVWSPQKRIQDMEREKVDMQVISPIPVTF
SYWAPVEEALAMARIQNDFIAEVVKQYPDRFIGLGTVPLQDVEIAIREMDRCVHELGLKGLEIGTNVNGANLDDPALLPF
FEMCEQWNVPLFVHPWETLGRERMPLHNLMYTVGMPSETALAAASLILGGVMAKFPRLKICFAHGGGSFPYILARLDQGW
RVWPHLRLLDQPPSYYAKNFYFDSLVYEPVNIQYLIERFGHERIMMGSDYPFLLREIPPGEAVDRTLELTEEQHRAIFGE
NALRFLNMSPVKVSEK

Sequences:

>Translated_336_residues
MRVDFHTHIIPEDLPDFTQRYQGDRWPVLKRTCACGANIMVAGKVFREVTDQVWSPQKRIQDMEREKVDMQVISPIPVTF
SYWAPVEEALAMARIQNDFIAEVVKQYPDRFIGLGTVPLQDVEIAIREMDRCVHELGLKGLEIGTNVNGANLDDPALLPF
FEMCEQWNVPLFVHPWETLGRERMPLHNLMYTVGMPSETALAAASLILGGVMAKFPRLKICFAHGGGSFPYILARLDQGW
RVWPHLRLLDQPPSYYAKNFYFDSLVYEPVNIQYLIERFGHERIMMGSDYPFLLREIPPGEAVDRTLELTEEQHRAIFGE
NALRFLNMSPVKVSEK
>Mature_336_residues
MRVDFHTHIIPEDLPDFTQRYQGDRWPVLKRTCACGANIMVAGKVFREVTDQVWSPQKRIQDMEREKVDMQVISPIPVTF
SYWAPVEEALAMARIQNDFIAEVVKQYPDRFIGLGTVPLQDVEIAIREMDRCVHELGLKGLEIGTNVNGANLDDPALLPF
FEMCEQWNVPLFVHPWETLGRERMPLHNLMYTVGMPSETALAAASLILGGVMAKFPRLKICFAHGGGSFPYILARLDQGW
RVWPHLRLLDQPPSYYAKNFYFDSLVYEPVNIQYLIERFGHERIMMGSDYPFLLREIPPGEAVDRTLELTEEQHRAIFGE
NALRFLNMSPVKVSEK

Specific function: Unknown

COG id: COG2159

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI109715856, Length=330, Percent_Identity=41.2121212121212, Blast_Score=293, Evalue=1e-79,
Organism=Caenorhabditis elegans, GI71995651, Length=331, Percent_Identity=35.6495468277946, Blast_Score=237, Evalue=7e-63,
Organism=Caenorhabditis elegans, GI71995655, Length=380, Percent_Identity=31.8421052631579, Blast_Score=211, Evalue=3e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38655; Mature: 38655

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVDFHTHIIPEDLPDFTQRYQGDRWPVLKRTCACGANIMVAGKVFREVTDQVWSPQKRI
CCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHCCHHHHH
QDMEREKVDMQVISPIPVTFSYWAPVEEALAMARIQNDFIAEVVKQYPDRFIGLGTVPLQ
HHHHHHHCCCEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCHH
DVEIAIREMDRCVHELGLKGLEIGTNVNGANLDDPALLPFFEMCEQWNVPLFVHPWETLG
HHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECHHHCC
RERMPLHNLMYTVGMPSETALAAASLILGGVMAKFPRLKICFAHGGGSFPYILARLDQGW
CCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCC
RVWPHLRLLDQPPSYYAKNFYFDSLVYEPVNIQYLIERFGHERIMMGSDYPFLLREIPPG
EECCCCEEECCCCHHHHHHHHHHHHEECCCHHHHHHHHHCCCEEEECCCCCHHEEECCCC
EAVDRTLELTEEQHRAIFGENALRFLNMSPVKVSEK
HHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEECCCC
>Mature Secondary Structure
MRVDFHTHIIPEDLPDFTQRYQGDRWPVLKRTCACGANIMVAGKVFREVTDQVWSPQKRI
CCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHCCHHHHH
QDMEREKVDMQVISPIPVTFSYWAPVEEALAMARIQNDFIAEVVKQYPDRFIGLGTVPLQ
HHHHHHHCCCEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCHH
DVEIAIREMDRCVHELGLKGLEIGTNVNGANLDDPALLPFFEMCEQWNVPLFVHPWETLG
HHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECHHHCC
RERMPLHNLMYTVGMPSETALAAASLILGGVMAKFPRLKICFAHGGGSFPYILARLDQGW
CCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCC
RVWPHLRLLDQPPSYYAKNFYFDSLVYEPVNIQYLIERFGHERIMMGSDYPFLLREIPPG
EECCCCEEECCCCHHHHHHHHHHHHEECCCHHHHHHHHHCCCEEEECCCCCHHEEECCCC
EAVDRTLELTEEQHRAIFGENALRFLNMSPVKVSEK
HHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA