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The map label for this gene is glvR [H]

Identifier: 138896771

GI number: 138896771

Start: 3234980

End: 3235768

Strand: Direct

Name: glvR [H]

Synonym: GTNG_3134

Alternate gene names: 138896771

Gene position: 3234980-3235768 (Clockwise)

Preceding gene: 138896759

Following gene: 138896777

Centisome position: 91.12

GC content: 50.7

Gene sequence:

>789_bases
ATGTTTACCCCCGAACAAATCGCCCAGTTTTCCGAGTTGGATTATGCCATCTACGATTATGTGGTCAAACATCCTCATGA
AGTCGCTTACATGCGCATTCGCGAGCTTGCCGAGGCTGTCCATGTCTCGCCACCGACTGTGCTCCGTTTTTGCAAGAAGG
TCGGCTGCGATGGGTTCAGCGAGTTCAAAACGAAATGGAAGCTACACTTGCGGGAAAACGAACGAACGTCGATCATCAGC
AGCCAAGAAGCATTAAGAGAATTTTTTGAGCGGACATTAACGGCTGATTACGAGCGAACCATTCTGGATGCCGCCACCGT
GATTGCCCGGGCCGATCACGTCATTTTTGTCGGCTCAGGCAGCTCCGGTATTTTGGCCGAATACGGCTCGCGTTATTTTT
CCGCGTTTCAAAAGTTTTCTGTTTACATTAAAGACCCGTTTTTCCCGATTTACGGCCATTATTTTACCAACTGTGTCGTC
ATCGCCTTGTCGGTGTCCGGCGAAACACAGCACACGCTCGCTCAAGTGCACCGTTTTAAGGAAAAAGGCGGCACGATCAT
CAGCATCACAAATCGAAAACATTGTTCACTCGCTAACATCTCCGACTACAACTTGACATACTACGCCACCGCCGAGCGAA
TGGGACAGACAGACGTGACGACACAGCTACCGGTCGTTTATTTGCTTGAGCGGCTCGCGAAGGAAATGTATCGGTTACTG
CCGACGCAGACTGACCGAGGCCGAACGGTCGGTGACAAAGCTACAACTCGGCACCGTTCGTCGCAATAA

Upstream 100 bases:

>100_bases
AACGGAGTTGCTTAGGGAAACCTTGTCCTCCGCTGTGCCCAGCAAACTGCTGAGCATGGAGGAAGTTTTTCACCACTCTT
TTCGAAAGCGAGGGAGCCCG

Downstream 100 bases:

>100_bases
CCCGTTGATACCAATAAAAGCTTTTCTTTTTGATGCGGCGTAAATCTTTTTCCGATTCATCATCACGGTTGACGTACACA
AATCCGTACCGTTTTTGGTA

Product: transcriptional regulator

Products: NA

Alternate protein names: Glv operon regulatory protein [H]

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MFTPEQIAQFSELDYAIYDYVVKHPHEVAYMRIRELAEAVHVSPPTVLRFCKKVGCDGFSEFKTKWKLHLRENERTSIIS
SQEALREFFERTLTADYERTILDAATVIARADHVIFVGSGSSGILAEYGSRYFSAFQKFSVYIKDPFFPIYGHYFTNCVV
IALSVSGETQHTLAQVHRFKEKGGTIISITNRKHCSLANISDYNLTYYATAERMGQTDVTTQLPVVYLLERLAKEMYRLL
PTQTDRGRTVGDKATTRHRSSQ

Sequences:

>Translated_262_residues
MFTPEQIAQFSELDYAIYDYVVKHPHEVAYMRIRELAEAVHVSPPTVLRFCKKVGCDGFSEFKTKWKLHLRENERTSIIS
SQEALREFFERTLTADYERTILDAATVIARADHVIFVGSGSSGILAEYGSRYFSAFQKFSVYIKDPFFPIYGHYFTNCVV
IALSVSGETQHTLAQVHRFKEKGGTIISITNRKHCSLANISDYNLTYYATAERMGQTDVTTQLPVVYLLERLAKEMYRLL
PTQTDRGRTVGDKATTRHRSSQ
>Mature_262_residues
MFTPEQIAQFSELDYAIYDYVVKHPHEVAYMRIRELAEAVHVSPPTVLRFCKKVGCDGFSEFKTKWKLHLRENERTSIIS
SQEALREFFERTLTADYERTILDAATVIARADHVIFVGSGSSGILAEYGSRYFSAFQKFSVYIKDPFFPIYGHYFTNCVV
IALSVSGETQHTLAQVHRFKEKGGTIISITNRKHCSLANISDYNLTYYATAERMGQTDVTTQLPVVYLLERLAKEMYRLL
PTQTDRGRTVGDKATTRHRSSQ

Specific function: Positive regulator of the glv operon expression, which consists of glvA, glvR and glvC [H]

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 30008; Mature: 30008

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: PS00356 HTH_LACI_1 ; PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTPEQIAQFSELDYAIYDYVVKHPHEVAYMRIRELAEAVHVSPPTVLRFCKKVGCDGFS
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHH
EFKTKWKLHLRENERTSIISSQEALREFFERTLTADYERTILDAATVIARADHVIFVGSG
HHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECC
SSGILAEYGSRYFSAFQKFSVYIKDPFFPIYGHYFTNCVVIALSVSGETQHTLAQVHRFK
CCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHH
EKGGTIISITNRKHCSLANISDYNLTYYATAERMGQTDVTTQLPVVYLLERLAKEMYRLL
HCCCEEEEECCCCCCCCCCCCCCCEEEEEEHHHCCCCCCHHHCCHHHHHHHHHHHHHHHC
PTQTDRGRTVGDKATTRHRSSQ
CCCCCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MFTPEQIAQFSELDYAIYDYVVKHPHEVAYMRIRELAEAVHVSPPTVLRFCKKVGCDGFS
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHH
EFKTKWKLHLRENERTSIISSQEALREFFERTLTADYERTILDAATVIARADHVIFVGSG
HHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECC
SSGILAEYGSRYFSAFQKFSVYIKDPFFPIYGHYFTNCVVIALSVSGETQHTLAQVHRFK
CCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHH
EKGGTIISITNRKHCSLANISDYNLTYYATAERMGQTDVTTQLPVVYLLERLAKEMYRLL
HCCCEEEEECCCCCCCCCCCCCCCEEEEEEHHHCCCCCCHHHCCHHHHHHHHHHHHHHHC
PTQTDRGRTVGDKATTRHRSSQ
CCCCCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8704981; 9384377; 11489864 [H]