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The map label for this gene is yfdH [C]

Identifier: 138896719

GI number: 138896719

Start: 3179548

End: 3180234

Strand: Direct

Name: yfdH [C]

Synonym: GTNG_3082

Alternate gene names: 138896719

Gene position: 3179548-3180234 (Clockwise)

Preceding gene: 138896715

Following gene: 138896720

Centisome position: 89.56

GC content: 46.0

Gene sequence:

>687_bases
TTGAAAATATTAGTGATCATCCCGGCGTATAACGAGGAAGCCACCATCCAAAATACGGTGCTCAACTTGCAGCGCATATG
TCCGTACGATTATATCGTCATTAACGATGGTTCGACGGATCGAACGGGCGATATTCTCGACCAGTCCGGGTTTCATCACC
TTGATTTGCCTGTTAATTTAGGCATCGGTGGAGCAATGCAAACTGGGTATCGCTATGCGCTCGAACACGGTTATGACTAC
GCCATTCAGCTTGATGCCGACGGCCAACACGATCCGAACGATTTAGAAACGCTTGTTAGGGAAATGATCACATCTGGCTA
TGACATGGTCATTGGTTCACGCTTTGTCGAAAAAACAAATTATAAAGGAAGCCGATGTCGCCGCCTTGGTATTCTTTACT
TCTGTTACTTGCTTTACCTCGCGTGCGGCGTGAAAATTACCGATCCGACATCAGGCTATCGCATTGTCAATCGCCGTGTC
ATTCGTGAGTTTGCCCGCGAGTATCCGATTGATTATCCCGAAGTGGAAGTCATCGCCCGCCTTGCCAAAAAAGGATATAA
AATTAAAGAAGTGAAAGTGGAAATGAATGCGCGCCAAGGGGGACGGTCATCGATTACCCCATTTAAATCGCTGTACTATA
TGACGAAAGTCACTTTCACCTCATTAATTCGTGCGATCTTTTCGTAA

Upstream 100 bases:

>100_bases
CTACCGTATCTCTAGGACACATGACACCCTCCTATGAACATGATATAATAATTAGTTAGTTGAACGGGGTTATCTATATT
CAGGAAAAGGAGGTAAAATA

Downstream 100 bases:

>100_bases
AAGAGGTGAAAGATCATGAGTAGCGTTCAATGGATTACAGTAGCATTGGCTTTTTTATTCTTAATTCAAGTCATTTCCTA
TTCGGTTCGCAACCAATTGC

Product: cell wall biosynthesis glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKILVIIPAYNEEATIQNTVLNLQRICPYDYIVINDGSTDRTGDILDQSGFHHLDLPVNLGIGGAMQTGYRYALEHGYDY
AIQLDADGQHDPNDLETLVREMITSGYDMVIGSRFVEKTNYKGSRCRRLGILYFCYLLYLACGVKITDPTSGYRIVNRRV
IREFAREYPIDYPEVEVIARLAKKGYKIKEVKVEMNARQGGRSSITPFKSLYYMTKVTFTSLIRAIFS

Sequences:

>Translated_228_residues
MKILVIIPAYNEEATIQNTVLNLQRICPYDYIVINDGSTDRTGDILDQSGFHHLDLPVNLGIGGAMQTGYRYALEHGYDY
AIQLDADGQHDPNDLETLVREMITSGYDMVIGSRFVEKTNYKGSRCRRLGILYFCYLLYLACGVKITDPTSGYRIVNRRV
IREFAREYPIDYPEVEVIARLAKKGYKIKEVKVEMNARQGGRSSITPFKSLYYMTKVTFTSLIRAIFS
>Mature_228_residues
MKILVIIPAYNEEATIQNTVLNLQRICPYDYIVINDGSTDRTGDILDQSGFHHLDLPVNLGIGGAMQTGYRYALEHGYDY
AIQLDADGQHDPNDLETLVREMITSGYDMVIGSRFVEKTNYKGSRCRRLGILYFCYLLYLACGVKITDPTSGYRIVNRRV
IREFAREYPIDYPEVEVIARLAKKGYKIKEVKVEMNARQGGRSSITPFKSLYYMTKVTFTSLIRAIFS

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 26040; Mature: 26040

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVIIPAYNEEATIQNTVLNLQRICPYDYIVINDGSTDRTGDILDQSGFHHLDLPVNL
CEEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHCCCCCEEECCEEEC
GIGGAMQTGYRYALEHGYDYAIQLDADGQHDPNDLETLVREMITSGYDMVIGSRFVEKTN
CCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCC
YKGSRCRRLGILYFCYLLYLACGVKITDPTSGYRIVNRRVIREFAREYPIDYPEVEVIAR
CCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LAKKGYKIKEVKVEMNARQGGRSSITPFKSLYYMTKVTFTSLIRAIFS
HHHCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKILVIIPAYNEEATIQNTVLNLQRICPYDYIVINDGSTDRTGDILDQSGFHHLDLPVNL
CEEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHCCCCCEEECCEEEC
GIGGAMQTGYRYALEHGYDYAIQLDADGQHDPNDLETLVREMITSGYDMVIGSRFVEKTN
CCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCC
YKGSRCRRLGILYFCYLLYLACGVKITDPTSGYRIVNRRVIREFAREYPIDYPEVEVIAR
CCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LAKKGYKIKEVKVEMNARQGGRSSITPFKSLYYMTKVTFTSLIRAIFS
HHHCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]