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The map label for this gene is yvzB [H]

Identifier: 138896704

GI number: 138896704

Start: 3161130

End: 3161957

Strand: Reverse

Name: yvzB [H]

Synonym: GTNG_3067

Alternate gene names: 138896704

Gene position: 3161957-3161130 (Counterclockwise)

Preceding gene: 138896705

Following gene: 138896703

Centisome position: 89.06

GC content: 48.67

Gene sequence:

>828_bases
ATGCGAATTAACCATAACATCCAAGCGCTGAACGCCTATCGCAACTTAGCGGCCAACCAGTCGAGCATTTCGAAAAACTT
AGAGCGCCTCTCGTCGGGCTTGCGCATCAACCGTGCGGCCGATGACGCAGCGGGACTCGCCATTTCAGAAAAAATGCGCT
CGCAAATCCGCGGTCTGCAAATGGCAGAACGCAACGCGTTGGATGCCATCTCATTGATCCAAACGGCGGAGGGTGCGTTA
AACGAAGTCCATAGTATCTTGCAGCGGATGCGCGAACTGGCCGTGCAAGCGGCGAATGGTACAAACCAAGACACGGACCG
CGAGGCTCTTGACAGTGAGTTTCAACAGTTAATTGAGGAAATTGATCGCATTGGTAAAGAAACCCAATTTAATAAGATGA
ATATACTTGCTGCTAATCAGTCGATCAGTATCCAGCTCGGTGCAAATGATGGGCAAACATTGACCATGTCCTGGAAACAA
CAGTTGAAAACCTCTCTTGGCGAAGACGAGATCGGCATCAGCTCTTTAGATATCACAACAGTTGACAATGCTCAAACGGC
GATCAGCACATTGGACGAGGCCATTATCTCTGTATCCAAATCTCGTTCTAAAATGGGTGCCTATCAAAACCGCCTCGAGC
ACACAATTAACAACTTAACAACTGCAAATGAAAACTTAACTTCTGCCGAATCCCGCATCCGTGATACGGATATGGCGATG
GAGATGGCGGAGTTTACGAAAAACAACATTTTGACGCAAGCGGCGCAGGCGATGCTCGCGCAATCGAACCAACTGCCGCA
AGGGATTTTGCAGCTGCTAAAAAGCTAA

Upstream 100 bases:

>100_bases
AAGTGGTGTTTCACCAGTGCAATCCGTGCACAAGCAAAAAGCTGCAGCCTACGAACAATTCATCGCTTATGAGAGATCAG
GACCAGAGGAGTGAATGTCC

Downstream 100 bases:

>100_bases
TTGAGTCCGCAGTGGGCGGGGCCATAACGCCTCGCCCTTTTGCTATGATTGTGCGATAATGGTCATAACAAGAGGTGAAA
GGCAATGGAAGTGCAAAAAG

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MRINHNIQALNAYRNLAANQSSISKNLERLSSGLRINRAADDAAGLAISEKMRSQIRGLQMAERNALDAISLIQTAEGAL
NEVHSILQRMRELAVQAANGTNQDTDREALDSEFQQLIEEIDRIGKETQFNKMNILAANQSISIQLGANDGQTLTMSWKQ
QLKTSLGEDEIGISSLDITTVDNAQTAISTLDEAIISVSKSRSKMGAYQNRLEHTINNLTTANENLTSAESRIRDTDMAM
EMAEFTKNNILTQAAQAMLAQSNQLPQGILQLLKS

Sequences:

>Translated_275_residues
MRINHNIQALNAYRNLAANQSSISKNLERLSSGLRINRAADDAAGLAISEKMRSQIRGLQMAERNALDAISLIQTAEGAL
NEVHSILQRMRELAVQAANGTNQDTDREALDSEFQQLIEEIDRIGKETQFNKMNILAANQSISIQLGANDGQTLTMSWKQ
QLKTSLGEDEIGISSLDITTVDNAQTAISTLDEAIISVSKSRSKMGAYQNRLEHTINNLTTANENLTSAESRIRDTDMAM
EMAEFTKNNILTQAAQAMLAQSNQLPQGILQLLKS
>Mature_275_residues
MRINHNIQALNAYRNLAANQSSISKNLERLSSGLRINRAADDAAGLAISEKMRSQIRGLQMAERNALDAISLIQTAEGAL
NEVHSILQRMRELAVQAANGTNQDTDREALDSEFQQLIEEIDRIGKETQFNKMNILAANQSISIQLGANDGQTLTMSWKQ
QLKTSLGEDEIGISSLDITTVDNAQTAISTLDEAIISVSKSRSKMGAYQNRLEHTINNLTTANENLTSAESRIRDTDMAM
EMAEFTKNNILTQAAQAMLAQSNQLPQGILQLLKS

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=186, Percent_Identity=48.3870967741936, Blast_Score=165, Evalue=3e-42,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 30230; Mature: 30230

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRINHNIQALNAYRNLAANQSSISKNLERLSSGLRINRAADDAAGLAISEKMRSQIRGLQ
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHH
MAERNALDAISLIQTAEGALNEVHSILQRMRELAVQAANGTNQDTDREALDSEFQQLIEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
IDRIGKETQFNKMNILAANQSISIQLGANDGQTLTMSWKQQLKTSLGEDEIGISSLDITT
HHHHCCCCCCCCEEEEEECCEEEEEECCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEEEE
VDNAQTAISTLDEAIISVSKSRSKMGAYQNRLEHTINNLTTANENLTSAESRIRDTDMAM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
EMAEFTKNNILTQAAQAMLAQSNQLPQGILQLLKS
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MRINHNIQALNAYRNLAANQSSISKNLERLSSGLRINRAADDAAGLAISEKMRSQIRGLQ
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHH
MAERNALDAISLIQTAEGALNEVHSILQRMRELAVQAANGTNQDTDREALDSEFQQLIEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
IDRIGKETQFNKMNILAANQSISIQLGANDGQTLTMSWKQQLKTSLGEDEIGISSLDITT
HHHHCCCCCCCCEEEEEECCEEEEEECCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEEEE
VDNAQTAISTLDEAIISVSKSRSKMGAYQNRLEHTINNLTTANENLTSAESRIRDTDMAM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
EMAEFTKNNILTQAAQAMLAQSNQLPQGILQLLKS
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1479346; 11058132 [H]