| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is fliT
Identifier: 138896689
GI number: 138896689
Start: 3150165
End: 3150518
Strand: Reverse
Name: fliT
Synonym: GTNG_3052
Alternate gene names: 138896689
Gene position: 3150518-3150165 (Counterclockwise)
Preceding gene: 138896690
Following gene: 138896688
Centisome position: 88.74
GC content: 59.89
Gene sequence:
>354_bases ATGGGCGTAGTGCACGATGTTTGGGTGGTGACGAAACAGCTGCTTGAAGCGACGGCGCTGCCGTGGCCAGCTGAGGAGCG CGAGACGTGGCTGTCGCAGGTCGATGAGCTGCTTCGGCGACGCGAGAGGCTGCTTCACAAGCTGCGGCCGCCATACAGTG AGGAAGAGCAGCGGCTTGGCCGCGAGATCGTCGCTTGGAATCAGGAGATTGAGGCGCGGCTTCGTCAAGTGCGCGATGAG ATTCGCGATGATTTGCGGATGGCAGGGGCGAAGCGGCAGGCGAATGCTCACTACGTTCACCCATACGAGCAGCCGCTTTC CTTTGACGGGATGTTTTATGATAAGCGACGATAG
Upstream 100 bases:
>100_bases TGGACGAAGTGGAAGGGTATGTCACGGAGTTTCGCGATACGTGGAAGCAAGTGATTCAGTTGAATCGGCAACGGCAATAC GCGGAAGGCGGACAGGCGTA
Downstream 100 bases:
>100_bases GTGGGATTCAGGATGGTGGAATTGACAAGCACGGCGCTGAATATCATACGCCAATACGCGGCGCTGCTCGAGACGGTCGA AGAAGGACTTGATTATGTGG
Product: flagellar protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MGVVHDVWVVTKQLLEATALPWPAEERETWLSQVDELLRRRERLLHKLRPPYSEEEQRLGREIVAWNQEIEARLRQVRDE IRDDLRMAGAKRQANAHYVHPYEQPLSFDGMFYDKRR
Sequences:
>Translated_117_residues MGVVHDVWVVTKQLLEATALPWPAEERETWLSQVDELLRRRERLLHKLRPPYSEEEQRLGREIVAWNQEIEARLRQVRDE IRDDLRMAGAKRQANAHYVHPYEQPLSFDGMFYDKRR >Mature_116_residues GVVHDVWVVTKQLLEATALPWPAEERETWLSQVDELLRRRERLLHKLRPPYSEEEQRLGREIVAWNQEIEARLRQVRDEI RDDLRMAGAKRQANAHYVHPYEQPLSFDGMFYDKRR
Specific function: May act as an export chaperone for the filament capping protein fliD
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm, cytosol
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacillales fliT family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FLIT_GEOTN (A4ISU3)
Other databases:
- EMBL: CP000557 - RefSeq: YP_001127142.1 - STRING: A4ISU3 - GeneID: 4967978 - GenomeReviews: CP000557_GR - KEGG: gtn:GTNG_3052 - NMPDR: fig|420246.5.peg.2930 - eggNOG: NOG72198 - HOGENOM: HBG491339 - OMA: DGMFYDK - ProtClustDB: CLSK904721 - BioCyc: GTHE420246:GTNG_3052-MONOMER - GO: GO:0005829
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14120; Mature: 13989
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVVHDVWVVTKQLLEATALPWPAEERETWLSQVDELLRRRERLLHKLRPPYSEEEQRLG CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH REIVAWNQEIEARLRQVRDEIRDDLRMAGAKRQANAHYVHPYEQPLSFDGMFYDKRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GVVHDVWVVTKQLLEATALPWPAEERETWLSQVDELLRRRERLLHKLRPPYSEEEQRLG CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH REIVAWNQEIEARLRQVRDEIRDDLRMAGAKRQANAHYVHPYEQPLSFDGMFYDKRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA