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The map label for this gene is gerIA [H]

Identifier: 138896602

GI number: 138896602

Start: 3062301

End: 3063770

Strand: Direct

Name: gerIA [H]

Synonym: GTNG_2965

Alternate gene names: 138896602

Gene position: 3062301-3063770 (Clockwise)

Preceding gene: 138896601

Following gene: 138896603

Centisome position: 86.25

GC content: 47.21

Gene sequence:

>1470_bases
ATGACAGCTCCACCTCCATCCGTATGGACAACGCTGCAAACATTAGGGAGCTCGACGGATTTCCAAACAAAAGTGTACCG
GAACGATACAGCCGGTCTCTATCTATGGGTGTCGTATGTCGAGCCGATGGTTGATATGGAATTTGTTGCTCGCTCTATTT
TTCCTTACTTGTTTCATTGTCCATTTTCATCTTTAGAAGAGATCCACCGAGCTCTTCCAATCGACGATGCATATATTTCT
AGCGACCCTAATAATGTGAAGGAAAAATTGCTCGAGGGATATTTATTCATCCGCCTTCATGAAACGGACGAAACCGGGCT
GCTCGTAAAGGCGCAAAAAACATTGGAGCGTGCACTCACCGTTCCCGAAGTAAAATTTAGCGTCGTTGGTCCAAAAGAGT
CGTTTATTGAATCGTTGGAAACGAATTTATTTTTATTGCGCAAACGAATTCCGATCGACCGTTTGACGGTCAAAATGACA
ACGGTCGGAACGTTGTCAAAAACGAAAGTGGCGGTTGTTTATATTGATGGCATTGCCAATCCCGACAACGTCCAAACGGT
TCTTCAGCGCATCGAGGAAGTGGAATTTGACGAGATCATTGACAGCTCTTATATCGTGCAAATCATTTCGGACAATCGAC
ACTCTCCCTTTCCGCAGCTGCTCGATACGGAGCGCCCGGACCGAGTCGCTGCCGTACTGGCCGAAGGAAAAGTGGCGATT
ATGGTAGATGGATCGCCACACGTATTGATCGGTCCAACGACGTTAGTGGAATTTTTTTCATCCTTTGAAGACTACTTTCT
CAATTGGACGGTCGCATCGTTTTTCCGTCTCATCCGCCTGTTTTCGGTCACCTTTTCTATTTTGATTACGCCGATGTATG
TAGCGACGTTGAACTATCATTACGAATTGATTCCAAAAGATTTACTCGGCACCTTAATTACATCGAGAAGGGAAATTCCG
TTCCCGCCTATTTTGGAAGTGCTGTTTCTCGAACTGACGATTGAGCTATTAAGGGAGGCCGGGGCACGGCTCCCCACAAA
AGTCGGCCAAACGATCGGTATCGTCGGTGGGATTGTCATTGGAACCGCTTCTGTTGAGGCCGGTTTGACAAGTAATGTTT
TGCTCATCTTAGTGGCGCTCGCCGCATTGGCTTCCTTTACTACCCCCGTTTATAAAATCGGGAACACGATTCGCTTGATG
CGTTTTCCATTTATCCTGTTCGCCGAGATATGGGGGCTGCTTGGCGTTGCCTTTTGTTTTTGTATTATCGTGACCCATCT
GCTTTACTTGACTTCGCTCGGGCGTCCGTTCCTTTCCCCTTTATATCCGCCGCGTTGGCGGGATTTAAAAGACGCGTTGG
TCCGCCTGCCGTTTACAAGCCAATCCAAACGGCCGGAAACATTGCGAATCGAGCAGCCCATTCGCTTTGATGGGAAAAAG
GCAAAACAAAAACGAGACATCGACGAGTGA

Upstream 100 bases:

>100_bases
AACTGCAGTGAAGGGAACAAACGGGGATGCCCGCTATTGCGTGCGGACATCCTCTTTCACGTCTGAAAAGCAGAAATTCT
GAACACGAAGGGGGAGAGGG

Downstream 100 bases:

>100_bases
AAACTGATAGGAGGACGACGATGGCTTCTGTTGCCGAACGTCTACAAGTTTCACCTTTCATGACTTTTTTTATCATTATG
TCTATGCAAATCGGTATCGG

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 488

Protein sequence:

>489_residues
MTAPPPSVWTTLQTLGSSTDFQTKVYRNDTAGLYLWVSYVEPMVDMEFVARSIFPYLFHCPFSSLEEIHRALPIDDAYIS
SDPNNVKEKLLEGYLFIRLHETDETGLLVKAQKTLERALTVPEVKFSVVGPKESFIESLETNLFLLRKRIPIDRLTVKMT
TVGTLSKTKVAVVYIDGIANPDNVQTVLQRIEEVEFDEIIDSSYIVQIISDNRHSPFPQLLDTERPDRVAAVLAEGKVAI
MVDGSPHVLIGPTTLVEFFSSFEDYFLNWTVASFFRLIRLFSVTFSILITPMYVATLNYHYELIPKDLLGTLITSRREIP
FPPILEVLFLELTIELLREAGARLPTKVGQTIGIVGGIVIGTASVEAGLTSNVLLILVALAALASFTTPVYKIGNTIRLM
RFPFILFAEIWGLLGVAFCFCIIVTHLLYLTSLGRPFLSPLYPPRWRDLKDALVRLPFTSQSKRPETLRIEQPIRFDGKK
AKQKRDIDE

Sequences:

>Translated_489_residues
MTAPPPSVWTTLQTLGSSTDFQTKVYRNDTAGLYLWVSYVEPMVDMEFVARSIFPYLFHCPFSSLEEIHRALPIDDAYIS
SDPNNVKEKLLEGYLFIRLHETDETGLLVKAQKTLERALTVPEVKFSVVGPKESFIESLETNLFLLRKRIPIDRLTVKMT
TVGTLSKTKVAVVYIDGIANPDNVQTVLQRIEEVEFDEIIDSSYIVQIISDNRHSPFPQLLDTERPDRVAAVLAEGKVAI
MVDGSPHVLIGPTTLVEFFSSFEDYFLNWTVASFFRLIRLFSVTFSILITPMYVATLNYHYELIPKDLLGTLITSRREIP
FPPILEVLFLELTIELLREAGARLPTKVGQTIGIVGGIVIGTASVEAGLTSNVLLILVALAALASFTTPVYKIGNTIRLM
RFPFILFAEIWGLLGVAFCFCIIVTHLLYLTSLGRPFLSPLYPPRWRDLKDALVRLPFTSQSKRPETLRIEQPIRFDGKK
AKQKRDIDE
>Mature_488_residues
TAPPPSVWTTLQTLGSSTDFQTKVYRNDTAGLYLWVSYVEPMVDMEFVARSIFPYLFHCPFSSLEEIHRALPIDDAYISS
DPNNVKEKLLEGYLFIRLHETDETGLLVKAQKTLERALTVPEVKFSVVGPKESFIESLETNLFLLRKRIPIDRLTVKMTT
VGTLSKTKVAVVYIDGIANPDNVQTVLQRIEEVEFDEIIDSSYIVQIISDNRHSPFPQLLDTERPDRVAAVLAEGKVAIM
VDGSPHVLIGPTTLVEFFSSFEDYFLNWTVASFFRLIRLFSVTFSILITPMYVATLNYHYELIPKDLLGTLITSRREIPF
PPILEVLFLELTIELLREAGARLPTKVGQTIGIVGGIVIGTASVEAGLTSNVLLILVALAALASFTTPVYKIGNTIRLMR
FPFILFAEIWGLLGVAFCFCIIVTHLLYLTSLGRPFLSPLYPPRWRDLKDALVRLPFTSQSKRPETLRIEQPIRFDGKKA
KQKRDIDE

Specific function: Required for inosine germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 55210; Mature: 55079

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPPPSVWTTLQTLGSSTDFQTKVYRNDTAGLYLWVSYVEPMVDMEFVARSIFPYLFHC
CCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHC
PFSSLEEIHRALPIDDAYISSDPNNVKEKLLEGYLFIRLHETDETGLLVKAQKTLERALT
CHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCEEEEEEECCCCCCEEEEHHHHHHHHCC
VPEVKFSVVGPKESFIESLETNLFLLRKRIPIDRLTVKMTTVGTLSKTKVAVVYIDGIAN
CCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEECCCC
PDNVQTVLQRIEEVEFDEIIDSSYIVQIISDNRHSPFPQLLDTERPDRVAAVLAEGKVAI
CHHHHHHHHHHHHCCHHHHHCCHHEEEEEECCCCCCCHHHHCCCCCHHHHHHHCCCCEEE
MVDGSPHVLIGPTTLVEFFSSFEDYFLNWTVASFFRLIRLFSVTFSILITPMYVATLNYH
EECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
YELIPKDLLGTLITSRREIPFPPILEVLFLELTIELLREAGARLPTKVGQTIGIVGGIVI
HEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHE
GTASVEAGLTSNVLLILVALAALASFTTPVYKIGNTIRLMRFPFILFAEIWGLLGVAFCF
ECCHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
CIIVTHLLYLTSLGRPFLSPLYPPRWRDLKDALVRLPFTSQSKRPETLRIEQPIRFDGKK
HHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEECCCCCCCCHH
AKQKRDIDE
HHHHCCCCC
>Mature Secondary Structure 
TAPPPSVWTTLQTLGSSTDFQTKVYRNDTAGLYLWVSYVEPMVDMEFVARSIFPYLFHC
CCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHC
PFSSLEEIHRALPIDDAYISSDPNNVKEKLLEGYLFIRLHETDETGLLVKAQKTLERALT
CHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCEEEEEEECCCCCCEEEEHHHHHHHHCC
VPEVKFSVVGPKESFIESLETNLFLLRKRIPIDRLTVKMTTVGTLSKTKVAVVYIDGIAN
CCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEECCCC
PDNVQTVLQRIEEVEFDEIIDSSYIVQIISDNRHSPFPQLLDTERPDRVAAVLAEGKVAI
CHHHHHHHHHHHHCCHHHHHCCHHEEEEEECCCCCCCHHHHCCCCCHHHHHHHCCCCEEE
MVDGSPHVLIGPTTLVEFFSSFEDYFLNWTVASFFRLIRLFSVTFSILITPMYVATLNYH
EECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
YELIPKDLLGTLITSRREIPFPPILEVLFLELTIELLREAGARLPTKVGQTIGIVGGIVI
HEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHE
GTASVEAGLTSNVLLILVALAALASFTTPVYKIGNTIRLMRFPFILFAEIWGLLGVAFCF
ECCHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
CIIVTHLLYLTSLGRPFLSPLYPPRWRDLKDALVRLPFTSQSKRPETLRIEQPIRFDGKK
HHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEECCCCCCCCHH
AKQKRDIDE
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9852021 [H]