Click here to switch to the map view.

The map label for this gene is ytlD [H]

Identifier: 138896393

GI number: 138896393

Start: 2874549

End: 2875358

Strand: Direct

Name: ytlD [H]

Synonym: GTNG_2756

Alternate gene names: 138896393

Gene position: 2874549-2875358 (Clockwise)

Preceding gene: 138896392

Following gene: 138896398

Centisome position: 80.97

GC content: 51.11

Gene sequence:

>810_bases
TTGAATCCGTCTAATGAACGCATCCGCTCATTGCACCATGAATACCTCGCCGCGCTCCGCAAAGAACGGCGGGTGATTCG
CGTTTGGCAAGTTGCGCTCCTTATTGCCTTTTTCGCTGTCTGGGAAGCGGCAAGTCACTTTCGCTGGGTCGATCCGCTGC
TGTTTAGCTCTCCATCGGCCATTGGCAAATTGTTTATTGAAAAAATCGGCGACTACTCTCTCTTAACACATACGTGGGCC
ACCTTGTTTGAAACGATGCTCGGGTTTATCATCGGCACGGTCGGCGGTGCGCTCATCGGCGCGTTGCTTTGGTGGTTTCC
ACGCCTCGCCAAAACGCTTGATCCCTATTTGGTCGTCTTTAACGCCATGCCCAAAGTCGCACTCGGGCCGATTTTGATTG
TCGCCCTTGGACCGGGATTTACGTCGATCATCGCGATGGGTGTCGTTATTGCGATCATTATTACGACAATTGTGGTGTAT
GCCTCGTTTCAAGAAGTCGACTCGAACTATTTGAAAGTGTTGCGAACGTTTGGCGCCACCCGCTACCAATGTTTCAAAGA
AGCCGTGCTGCCAGCGTCGTTTCCGGCGATCATTTCAACGTTGAAAGTGAACGTCGGCCTCGCCTGGGTCGGCGTCATCA
CCGGCGAATTTCTCGTTTCCAAACAAGGGCTCGGCTATTTAATCATTTACGGCTTCCAAGTGTTCAATTTTACACTCGTC
TTGATGAGCCTGCTCATTGTCGCGGTGCTGTCGACATTGATGTATCAACTTGTCGCTATGATCGAAAAGAAATGGAGCAA
CCGCCGCTAA

Upstream 100 bases:

>100_bases
ATCATTCCGGAAGAGCTGCGTCACTGTCCGCCGTTCGCCGCTCGCCAGCATCCCACGTTTTCTCCGCTATTTCAATCCAT
TTGGAAGGAGATGGAGGCCC

Downstream 100 bases:

>100_bases
GAGACGTTCGTGAACGATCGATGAACGTCTCTTTTCGTTTTGCCGCCGAATATTAGCCGATCCACCCGCGCTGTTTGACT
TCCGCCAACGCCAACGGAAG

Product: ABC transporter permease

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MNPSNERIRSLHHEYLAALRKERRVIRVWQVALLIAFFAVWEAASHFRWVDPLLFSSPSAIGKLFIEKIGDYSLLTHTWA
TLFETMLGFIIGTVGGALIGALLWWFPRLAKTLDPYLVVFNAMPKVALGPILIVALGPGFTSIIAMGVVIAIIITTIVVY
ASFQEVDSNYLKVLRTFGATRYQCFKEAVLPASFPAIISTLKVNVGLAWVGVITGEFLVSKQGLGYLIIYGFQVFNFTLV
LMSLLIVAVLSTLMYQLVAMIEKKWSNRR

Sequences:

>Translated_269_residues
MNPSNERIRSLHHEYLAALRKERRVIRVWQVALLIAFFAVWEAASHFRWVDPLLFSSPSAIGKLFIEKIGDYSLLTHTWA
TLFETMLGFIIGTVGGALIGALLWWFPRLAKTLDPYLVVFNAMPKVALGPILIVALGPGFTSIIAMGVVIAIIITTIVVY
ASFQEVDSNYLKVLRTFGATRYQCFKEAVLPASFPAIISTLKVNVGLAWVGVITGEFLVSKQGLGYLIIYGFQVFNFTLV
LMSLLIVAVLSTLMYQLVAMIEKKWSNRR
>Mature_269_residues
MNPSNERIRSLHHEYLAALRKERRVIRVWQVALLIAFFAVWEAASHFRWVDPLLFSSPSAIGKLFIEKIGDYSLLTHTWA
TLFETMLGFIIGTVGGALIGALLWWFPRLAKTLDPYLVVFNAMPKVALGPILIVALGPGFTSIIAMGVVIAIIITTIVVY
ASFQEVDSNYLKVLRTFGATRYQCFKEAVLPASFPAIISTLKVNVGLAWVGVITGEFLVSKQGLGYLIIYGFQVFNFTLV
LMSLLIVAVLSTLMYQLVAMIEKKWSNRR

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786564, Length=229, Percent_Identity=21.3973799126638, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87081802, Length=247, Percent_Identity=22.6720647773279, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30063; Mature: 30063

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]