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The map label for this gene is ytoP [H]

Identifier: 138896362

GI number: 138896362

Start: 2842627

End: 2843703

Strand: Reverse

Name: ytoP [H]

Synonym: GTNG_2725

Alternate gene names: 138896362

Gene position: 2843703-2842627 (Counterclockwise)

Preceding gene: 138896364

Following gene: 138896361

Centisome position: 80.1

GC content: 57.1

Gene sequence:

>1077_bases
ATGAACGTAGAAACGCTGCAACTGTTTCAAACGTTGACCGAACTGCCAGGGGCGCCAGGCCATGAGCACGCGGTGCGGCA
GTTTATGCGCAAAGAGCTCGCCAAATACGCCGATGAGATCGTGCAAGACCGTCTCGGCAGCATTTTCGGCGTCAAGCGTG
GCGATGAGACAGGTCCAACGGTGATGGTCGCTGGCCATATGGACGAGGTCGGATTTATGGTAACGGCGATTACCGATAAC
GGCATGATTCGCTTTCAAACGCTCGGTAGCTGGTGGAATCAAGTCCTGCTCGCCCAGCGCGTGCAAATTATCACGGACGA
CGGGCCGGTCATTGGCGTCATCGGCTCGACTCCGCCGCATTTGCTCAATGAGGAGCAGCGCAACAAACCGATGGAACTCA
AACATATGCTCATTGACATCGGCGCGGAAAGCCGTGAGGACGCTGAACGGATCGGTATTCGTCCAGGCCAGCCGATCGTG
CCGGTCAGCCCGTTCACTCCGCTTGCAAACGGGAAAACGGTGATGGCCAAAGCGTGGGACAACCGGTTTGGCTGCGGGCT
TGCCATTGAGCTGTTAAAAGAGCTGAAAGACGAAACCGTGCCAAACGTGTTGTATGCCGGAGCGACGGTCCAAGAGGAAG
TCGGGCTGCGCGGGGCGCAGACGGCGGCAACGATGATTAATCCGGATATCTTTTTCGCCCTTGAAGCAAGTCCGGCGAAC
GATATGTCTGGCGATAAACAGGCGTTTGGCCATATCGGCAAAGGGGCGCTCCTCCGTTTGTACGACCGGACGATGGTGAC
GCACCGCGGCATGCGCGAGTTCGTGCTCGATACGGCGGAATCGCTTGGTGTGCCATATCAATTTTTCATTTCTCCAGCCG
GAGGAACGGACGCCGGCAGAGTCCATATCGCGAACCGCGGTGTGCCGTCGGCAGTGATTGGCCTTTGCGCTCGCTATATT
CATACGCATGCGTCGATCATTCATGTCGACGATTATGCGGCGGCCAAACAATTGATCGTCGAGCTTGTGAAACGATGCGA
CCGGGCGACGGTCGAAGCGATTCGCGCCAACAGCTGA

Upstream 100 bases:

>100_bases
CCTTTTGCCTTGATACGGATTAGTATAGCCGATTTTGACGGAAGATGTAAGCAGAGCGGAAAAACAGAAGGCAATGAATG
AAAAGAAAGGGAGAACCGTG

Downstream 100 bases:

>100_bases
TCAAAAGCGAATGGCGGCAAAGAAGCAACACGATGGCGAAAGCTGAACAAGATAAGGGGAGAAGCGGTAGCTTCTCCTTT
TCCATGCCAAGGAGGATGAG

Product: deblocking aminopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MNVETLQLFQTLTELPGAPGHEHAVRQFMRKELAKYADEIVQDRLGSIFGVKRGDETGPTVMVAGHMDEVGFMVTAITDN
GMIRFQTLGSWWNQVLLAQRVQIITDDGPVIGVIGSTPPHLLNEEQRNKPMELKHMLIDIGAESREDAERIGIRPGQPIV
PVSPFTPLANGKTVMAKAWDNRFGCGLAIELLKELKDETVPNVLYAGATVQEEVGLRGAQTAATMINPDIFFALEASPAN
DMSGDKQAFGHIGKGALLRLYDRTMVTHRGMREFVLDTAESLGVPYQFFISPAGGTDAGRVHIANRGVPSAVIGLCARYI
HTHASIIHVDDYAAAKQLIVELVKRCDRATVEAIRANS

Sequences:

>Translated_358_residues
MNVETLQLFQTLTELPGAPGHEHAVRQFMRKELAKYADEIVQDRLGSIFGVKRGDETGPTVMVAGHMDEVGFMVTAITDN
GMIRFQTLGSWWNQVLLAQRVQIITDDGPVIGVIGSTPPHLLNEEQRNKPMELKHMLIDIGAESREDAERIGIRPGQPIV
PVSPFTPLANGKTVMAKAWDNRFGCGLAIELLKELKDETVPNVLYAGATVQEEVGLRGAQTAATMINPDIFFALEASPAN
DMSGDKQAFGHIGKGALLRLYDRTMVTHRGMREFVLDTAESLGVPYQFFISPAGGTDAGRVHIANRGVPSAVIGLCARYI
HTHASIIHVDDYAAAKQLIVELVKRCDRATVEAIRANS
>Mature_358_residues
MNVETLQLFQTLTELPGAPGHEHAVRQFMRKELAKYADEIVQDRLGSIFGVKRGDETGPTVMVAGHMDEVGFMVTAITDN
GMIRFQTLGSWWNQVLLAQRVQIITDDGPVIGVIGSTPPHLLNEEQRNKPMELKHMLIDIGAESREDAERIGIRPGQPIV
PVSPFTPLANGKTVMAKAWDNRFGCGLAIELLKELKDETVPNVLYAGATVQEEVGLRGAQTAATMINPDIFFALEASPAN
DMSGDKQAFGHIGKGALLRLYDRTMVTHRGMREFVLDTAESLGVPYQFFISPAGGTDAGRVHIANRGVPSAVIGLCARYI
HTHASIIHVDDYAAAKQLIVELVKRCDRATVEAIRANS

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

Organism=Escherichia coli, GI1790332, Length=342, Percent_Identity=40.3508771929825, Blast_Score=230, Evalue=1e-61,
Organism=Escherichia coli, GI1788727, Length=347, Percent_Identity=34.8703170028818, Blast_Score=187, Evalue=8e-49,
Organism=Escherichia coli, GI87082417, Length=359, Percent_Identity=27.8551532033426, Blast_Score=148, Evalue=6e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: NA

Molecular weight: Translated: 39102; Mature: 39102

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVETLQLFQTLTELPGAPGHEHAVRQFMRKELAKYADEIVQDRLGSIFGVKRGDETGPT
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
VMVAGHMDEVGFMVTAITDNGMIRFQTLGSWWNQVLLAQRVQIITDDGPVIGVIGSTPPH
EEEECCCCCCCEEEEEEECCCEEEEEEHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCH
LLNEEQRNKPMELKHMLIDIGAESREDAERIGIRPGQPIVPVSPFTPLANGKTVMAKAWD
HCCHHHCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
NRFGCGLAIELLKELKDETVPNVLYAGATVQEEVGLRGAQTAATMINPDIFFALEASPAN
CCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHCCCCCHHHHHHCCCCEEEEEECCCCC
DMSGDKQAFGHIGKGALLRLYDRTMVTHRGMREFVLDTAESLGVPYQFFISPAGGTDAGR
CCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCE
VHIANRGVPSAVIGLCARYIHTHASIIHVDDYAAAKQLIVELVKRCDRATVEAIRANS
EEEECCCCHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHCHHHHHHHHCCC
>Mature Secondary Structure
MNVETLQLFQTLTELPGAPGHEHAVRQFMRKELAKYADEIVQDRLGSIFGVKRGDETGPT
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
VMVAGHMDEVGFMVTAITDNGMIRFQTLGSWWNQVLLAQRVQIITDDGPVIGVIGSTPPH
EEEECCCCCCCEEEEEEECCCEEEEEEHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCH
LLNEEQRNKPMELKHMLIDIGAESREDAERIGIRPGQPIVPVSPFTPLANGKTVMAKAWD
HCCHHHCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
NRFGCGLAIELLKELKDETVPNVLYAGATVQEEVGLRGAQTAATMINPDIFFALEASPAN
CCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHCCCCCHHHHHHCCCCEEEEEECCCCC
DMSGDKQAFGHIGKGALLRLYDRTMVTHRGMREFVLDTAESLGVPYQFFISPAGGTDAGR
CCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCE
VHIANRGVPSAVIGLCARYIHTHASIIHVDDYAAAKQLIVELVKRCDRATVEAIRANS
EEEECCCCHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]