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The map label for this gene is ytsP [H]

Identifier: 138896339

GI number: 138896339

Start: 2811638

End: 2812114

Strand: Direct

Name: ytsP [H]

Synonym: GTNG_2702

Alternate gene names: 138896339

Gene position: 2811638-2812114 (Clockwise)

Preceding gene: 138896338

Following gene: 138896341

Centisome position: 79.19

GC content: 55.97

Gene sequence:

>477_bases
ATGTTTCATCAACTAACCTACAACGGGACACGCGAAGAAAACTATGCGCTCGTCATCGAGCAGCTGAAGGCGCTCATCGC
CGGCGAACCGAACATGATCGCCAACTTGGCGAACGCTTCCGCCCTGCTCAACCAGTTTCTCACCGACATCAACTGGGTCG
GGTTTTATTTGGCAGATGGCGATGAGCTTGTGCTCGGTCCGTTCCAAGGATTGCCAGCATGCGTGCGCATTCCGTTCGGC
AAAGGCGTGTGCGGCACAGCGGCTGCCGAGCGGCGGACGGTCGTCGTTCCCGATGTGCACCAATTCCCAGGCCATATCGC
CTGTGATGCCGCATCCCAATCGGAAATCGTCGTGCCGCTCATTAAGGAAGGTCGCGTCATCGGTGTCCTTGATATCGACA
GCCCGATCAAGAACCGCTTTGATGACATTGACCGCCGCTATTTAGAGCAATTCGCCAGCGTGCTCGTTTCAGAATAA

Upstream 100 bases:

>100_bases
CCGACCTGCATCAAGGGCGGGACGTGATGGATCACGAGGCGCTTTCGATTGACAATCGCCAAGCGTCGTCATAAAATGGG
TCAAAAAGGAGGGCGAACAA

Downstream 100 bases:

>100_bases
GCGAAAATAGCGGTGAGCGCGAAGAAGGAATCCGCCTGTCCGGATTCCTTTTTCACCCTCTATATAGATGGTCACCATCA
TGAACGAAGATGGCGTTTTT

Product: GAF domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MFHQLTYNGTREENYALVIEQLKALIAGEPNMIANLANASALLNQFLTDINWVGFYLADGDELVLGPFQGLPACVRIPFG
KGVCGTAAAERRTVVVPDVHQFPGHIACDAASQSEIVVPLIKEGRVIGVLDIDSPIKNRFDDIDRRYLEQFASVLVSE

Sequences:

>Translated_158_residues
MFHQLTYNGTREENYALVIEQLKALIAGEPNMIANLANASALLNQFLTDINWVGFYLADGDELVLGPFQGLPACVRIPFG
KGVCGTAAAERRTVVVPDVHQFPGHIACDAASQSEIVVPLIKEGRVIGVLDIDSPIKNRFDDIDRRYLEQFASVLVSE
>Mature_158_residues
MFHQLTYNGTREENYALVIEQLKALIAGEPNMIANLANASALLNQFLTDINWVGFYLADGDELVLGPFQGLPACVRIPFG
KGVCGTAAAERRTVVVPDVHQFPGHIACDAASQSEIVVPLIKEGRVIGVLDIDSPIKNRFDDIDRRYLEQFASVLVSE

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=145, Percent_Identity=57.2413793103448, Blast_Score=167, Evalue=4e-43,
Organism=Saccharomyces cerevisiae, GI6322781, Length=167, Percent_Identity=44.9101796407186, Blast_Score=145, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 17314; Mature: 17314

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: PS01320 UPF0067

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHQLTYNGTREENYALVIEQLKALIAGEPNMIANLANASALLNQFLTDINWVGFYLADG
CCCEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
DELVLGPFQGLPACVRIPFGKGVCGTAAAERRTVVVPDVHQFPGHIACDAASQSEIVVPL
CEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEECCCHHHCCCEEEECCCCCCCEEEEE
IKEGRVIGVLDIDSPIKNRFDDIDRRYLEQFASVLVSE
ECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFHQLTYNGTREENYALVIEQLKALIAGEPNMIANLANASALLNQFLTDINWVGFYLADG
CCCEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
DELVLGPFQGLPACVRIPFGKGVCGTAAAERRTVVVPDVHQFPGHIACDAASQSEIVVPL
CEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEECCCHHHCCCEEEECCCCCCCEEEEE
IKEGRVIGVLDIDSPIKNRFDDIDRRYLEQFASVLVSE
ECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]