| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is nagE [H]
Identifier: 138895843
GI number: 138895843
Start: 2325962
End: 2327332
Strand: Reverse
Name: nagE [H]
Synonym: GTNG_2202
Alternate gene names: 138895843
Gene position: 2327332-2325962 (Counterclockwise)
Preceding gene: 138895844
Following gene: 138895842
Centisome position: 65.55
GC content: 48.07
Gene sequence:
>1371_bases ATGTTTATGTTAGGATTTTTACAGCGTCTAGGAAAGGCGTTTATGCTGCCGATTGCCGTTTTGCCGGCGGCTGGACTGTT GCTCCGGCTTGGTCAGGACGACTTATTAGATATTCCATTTATCGCTGCTGCGGGTGATGCGGTGTTTTCCAACTTGGCGT TGATTTTCGCCATTGGTGTCGCCATCGGCTTTTCAAAAGATGGCAATGGTGCTGCCGCGCTCGCTGGGGCGATCGGCTAT TTTGTTTTGACGAAAGGCGCTGCCGCGATTGATAAAGACATCAATATGTCCGTATTAGGCGGTATCATCTCCGGGGTGAT CGCCGGGCTTTTATACAATCGTTATCATGATATCAAGTTGCCGGACTGGCTCGGCTTTTTCGGTGGCCGGCGGTTTGTGC CGATCGTAACATCGCTTGTTATGATCGTGCTTGCTCTCGTTTTCGGATACATTTGGCCGCCGATTCAAGACGGCATTAAT GCGATCGGTCATTGGATCGTGGGCGCCGGGGCCGTTGGCGTTGGGATTTTTGGGTTCTTAAACCGGTTGCTCATTCCTGT TGGGCTGCACCATGTGTTAAACAGTTTCGTCTGGTTTGTGTTTGGTGAGTATGACGGTAAAACCGGTGATTTAAGCCGAT TTTTTGCCGGTGACCCGGATGCAGGGATTTTTATGGCTGGCTTCTTCCCGGTCATGATGTTCGGTCTCCCGGCGGCGGCA TTGGCGATGATCATCGCGGCGAAGAAGGAACGGCGCAAAGCGATTGCCGGTGCGCTCCTTGGCGTAGCGTTGACATCGTT TTTAACCGGTATTACAGAGCCGATCGAATTTTTGTTTATGTTTTTATCGCCGCTCTTGTATGTCGTTCATGCCGTGTTAA CTGGCTTATCGCTGGCGGTGGCGACGGCATTTGATATTCATCACGGGTTTACGTTCTCGGCCGGTGCGATTGACTTTTTC TTAAACTATGGAATTGCACAAAAACCGTATTTATTAATTGTTCAAGGACTCATCTATGCTGTGATCTATTTCGTTGTTTT CTATTTCCTGATTACGAAGCTCAATTTAAAAACGCCGGGACGTGAAGATGACGTAGAGGGAGAGTTTACCGACAGCAAAG CGGCGCAGTCGGGCGTAAAATATGAAGAGCTAGCGGTAAAATATATAGAGGCATTGGGAGGAAAAGAAAACCTCACACAA ATTGATAATTGTGTCACACGCTTGCGCTTAAAAGTAAAAGACATGTCAAAAGTCAACGAAGCTGAATTGAAGCGCTTAGG GGCGAAAGGGGTGCTTCGTCTCAACCAAACGGATTTGCAAGTGATCATTGGCACGGATGTCGAATTTTTAGCCAATGCGA TGAGAAAATAA
Upstream 100 bases:
>100_bases CCTTACTGACGGACGGCCACTGGAAGTTGTGAAATCAGTGTATCGCGGTGACCGATACAAATTCATCGTTGAAATGGAAC GAAGAAAATAAAAAGGGGGA
Downstream 100 bases:
>100_bases TCAAAAGTGAAATGGACAGATCGTTCTTGTATGCGAACGTTAGGAAGGAAGAGCGCTTATGAAACGATTGTTAGATTGCA GCGCCTCCGATTTCCGCAAG
Product: PTS system N-acetylglucosamine-specific transporter subunit IIABC
Products: NA
Alternate protein names: EIICBA-Nag; EII-Nag; N-acetylglucosamine permease IIC component; PTS system N-acetylglucosamine-specific EIIC component; N-acetylglucosamine-specific phosphotransferase enzyme IIB component; PTS system N-acetylglucosamine-specific EIIB component; N-acetylglucosamine-specific phosphotransferase enzyme IIA component; PTS system N-acetylglucosamine-specific EIIA component [H]
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MFMLGFLQRLGKAFMLPIAVLPAAGLLLRLGQDDLLDIPFIAAAGDAVFSNLALIFAIGVAIGFSKDGNGAAALAGAIGY FVLTKGAAAIDKDINMSVLGGIISGVIAGLLYNRYHDIKLPDWLGFFGGRRFVPIVTSLVMIVLALVFGYIWPPIQDGIN AIGHWIVGAGAVGVGIFGFLNRLLIPVGLHHVLNSFVWFVFGEYDGKTGDLSRFFAGDPDAGIFMAGFFPVMMFGLPAAA LAMIIAAKKERRKAIAGALLGVALTSFLTGITEPIEFLFMFLSPLLYVVHAVLTGLSLAVATAFDIHHGFTFSAGAIDFF LNYGIAQKPYLLIVQGLIYAVIYFVVFYFLITKLNLKTPGREDDVEGEFTDSKAAQSGVKYEELAVKYIEALGGKENLTQ IDNCVTRLRLKVKDMSKVNEAELKRLGAKGVLRLNQTDLQVIIGTDVEFLANAMRK
Sequences:
>Translated_456_residues MFMLGFLQRLGKAFMLPIAVLPAAGLLLRLGQDDLLDIPFIAAAGDAVFSNLALIFAIGVAIGFSKDGNGAAALAGAIGY FVLTKGAAAIDKDINMSVLGGIISGVIAGLLYNRYHDIKLPDWLGFFGGRRFVPIVTSLVMIVLALVFGYIWPPIQDGIN AIGHWIVGAGAVGVGIFGFLNRLLIPVGLHHVLNSFVWFVFGEYDGKTGDLSRFFAGDPDAGIFMAGFFPVMMFGLPAAA LAMIIAAKKERRKAIAGALLGVALTSFLTGITEPIEFLFMFLSPLLYVVHAVLTGLSLAVATAFDIHHGFTFSAGAIDFF LNYGIAQKPYLLIVQGLIYAVIYFVVFYFLITKLNLKTPGREDDVEGEFTDSKAAQSGVKYEELAVKYIEALGGKENLTQ IDNCVTRLRLKVKDMSKVNEAELKRLGAKGVLRLNQTDLQVIIGTDVEFLANAMRK >Mature_456_residues MFMLGFLQRLGKAFMLPIAVLPAAGLLLRLGQDDLLDIPFIAAAGDAVFSNLALIFAIGVAIGFSKDGNGAAALAGAIGY FVLTKGAAAIDKDINMSVLGGIISGVIAGLLYNRYHDIKLPDWLGFFGGRRFVPIVTSLVMIVLALVFGYIWPPIQDGIN AIGHWIVGAGAVGVGIFGFLNRLLIPVGLHHVLNSFVWFVFGEYDGKTGDLSRFFAGDPDAGIFMAGFFPVMMFGLPAAA LAMIIAAKKERRKAIAGALLGVALTSFLTGITEPIEFLFMFLSPLLYVVHAVLTGLSLAVATAFDIHHGFTFSAGAIDFF LNYGIAQKPYLLIVQGLIYAVIYFVVFYFLITKLNLKTPGREDDVEGEFTDSKAAQSGVKYEELAVKYIEALGGKENLTQ IDNCVTRLRLKVKDMSKVNEAELKRLGAKGVLRLNQTDLQVIIGTDVEFLANAMRK
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786894, Length=464, Percent_Identity=58.8362068965517, Blast_Score=504, Evalue=1e-144, Organism=Escherichia coli, GI1787343, Length=475, Percent_Identity=43.1578947368421, Blast_Score=370, Evalue=1e-103, Organism=Escherichia coli, GI1787908, Length=511, Percent_Identity=38.5518590998043, Blast_Score=305, Evalue=3e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001127 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR010974 [H]
Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 49177; Mature: 49177
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMLGFLQRLGKAFMLPIAVLPAAGLLLRLGQDDLLDIPFIAAAGDAVFSNLALIFAIGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHH AIGFSKDGNGAAALAGAIGYFVLTKGAAAIDKDINMSVLGGIISGVIAGLLYNRYHDIKL HHCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC PDWLGFFGGRRFVPIVTSLVMIVLALVFGYIWPPIQDGINAIGHWIVGAGAVGVGIFGFL CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH NRLLIPVGLHHVLNSFVWFVFGEYDGKTGDLSRFFAGDPDAGIFMAGFFPVMMFGLPAAA HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCHHH LAMIIAAKKERRKAIAGALLGVALTSFLTGITEPIEFLFMFLSPLLYVVHAVLTGLSLAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATAFDIHHGFTFSAGAIDFFLNYGIAQKPYLLIVQGLIYAVIYFVVFYFLITKLNLKTPG HHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC REDDVEGEFTDSKAAQSGVKYEELAVKYIEALGGKENLTQIDNCVTRLRLKVKDMSKVNE CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCH AELKRLGAKGVLRLNQTDLQVIIGTDVEFLANAMRK HHHHHHCCCCEEEECCCCEEEEECCCHHHHHHHHCC >Mature Secondary Structure MFMLGFLQRLGKAFMLPIAVLPAAGLLLRLGQDDLLDIPFIAAAGDAVFSNLALIFAIGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHH AIGFSKDGNGAAALAGAIGYFVLTKGAAAIDKDINMSVLGGIISGVIAGLLYNRYHDIKL HHCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC PDWLGFFGGRRFVPIVTSLVMIVLALVFGYIWPPIQDGINAIGHWIVGAGAVGVGIFGFL CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH NRLLIPVGLHHVLNSFVWFVFGEYDGKTGDLSRFFAGDPDAGIFMAGFFPVMMFGLPAAA HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCHHH LAMIIAAKKERRKAIAGALLGVALTSFLTGITEPIEFLFMFLSPLLYVVHAVLTGLSLAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATAFDIHHGFTFSAGAIDFFLNYGIAQKPYLLIVQGLIYAVIYFVVFYFLITKLNLKTPG HHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC REDDVEGEFTDSKAAQSGVKYEELAVKYIEALGGKENLTQIDNCVTRLRLKVKDMSKVNE CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCH AELKRLGAKGVLRLNQTDLQVIIGTDVEFLANAMRK HHHHHHCCCCEEEECCCCEEEEECCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3284790; 3056518; 8905232; 9278503 [H]