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The map label for this gene is ypfA [H]

Identifier: 138895806

GI number: 138895806

Start: 2292886

End: 2293557

Strand: Reverse

Name: ypfA [H]

Synonym: GTNG_2165

Alternate gene names: 138895806

Gene position: 2293557-2292886 (Counterclockwise)

Preceding gene: 138895807

Following gene: 138895805

Centisome position: 64.6

GC content: 50.45

Gene sequence:

>672_bases
ATGATGATCAAGATTGGGGATCGGATCTGGCTTGAGCCGCTCGACGGTTCAACGCGGCAATACCAGAGTAAGATGCTCTC
CGTCGCCGACGGGGTGATCCATATTAGTTATCCTGTCGATGAACAGAGCGGAAAAACGGTGTATTTGTTAAACGGCATGC
AATTTAAGGCGAGTTTTATCGGCCGAGATGGGGCTTTGTACATGTTTGATACGGAAGTGAAAGGGGAAATGCGCGACCCG
TCACCGATGGTTATTTTGACTTATCCGGGTGACAAATATGTCACGCGCATTCAGCGTCGCCGGTATGTGCGGGTGAAGGC
AAAGGTCGATGCTGCCGTCCATCCGCTTAATGGTGAATTCGCCCCGTTTGTAACGATGACGATCGATATTAGCGCCGGCG
GAGCCGCGCTCCTCATTCCGCCAACGCATGCTCCTCTTCTTCAACCAGGCAAGGCGGTTGAGCTTTGGCTTGTGCTGCCG
ATGCGCTCGGGTGAATACTATTATGTGAAAACGAAAGCTAAGCTCGTCCGCATAGTTACTGATGAGCACGGCATCGCAAA
AATGTCGGTTGAGTTCACGGATCTTCTTCCCCAAGACCGTGTTCGACTCATTCGTTACAGCTTTGAGCAGCAGCTTGACG
AAAAGAAAAGGGAAAAAGAAGAGAATAAATGA

Upstream 100 bases:

>100_bases
GAAGTGAAAGTTGTATGGTATAATAGTCATATGTAACGACGCGGGTCAGCGGCAAGTATTCGGTGATTCGACGGTTGGCC
GAAAGGGGACAAAAGGCAAG

Downstream 100 bases:

>100_bases
ACGGGCTGGGTGGAATACTGCTAGAAAAAACGGAAGGCAGGATGTTTGTGCCATGAAGCGGATCGAGCAGCTGTTATGGA
AGCTTGTTGTGATCCAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MMIKIGDRIWLEPLDGSTRQYQSKMLSVADGVIHISYPVDEQSGKTVYLLNGMQFKASFIGRDGALYMFDTEVKGEMRDP
SPMVILTYPGDKYVTRIQRRRYVRVKAKVDAAVHPLNGEFAPFVTMTIDISAGGAALLIPPTHAPLLQPGKAVELWLVLP
MRSGEYYYVKTKAKLVRIVTDEHGIAKMSVEFTDLLPQDRVRLIRYSFEQQLDEKKREKEENK

Sequences:

>Translated_223_residues
MMIKIGDRIWLEPLDGSTRQYQSKMLSVADGVIHISYPVDEQSGKTVYLLNGMQFKASFIGRDGALYMFDTEVKGEMRDP
SPMVILTYPGDKYVTRIQRRRYVRVKAKVDAAVHPLNGEFAPFVTMTIDISAGGAALLIPPTHAPLLQPGKAVELWLVLP
MRSGEYYYVKTKAKLVRIVTDEHGIAKMSVEFTDLLPQDRVRLIRYSFEQQLDEKKREKEENK
>Mature_223_residues
MMIKIGDRIWLEPLDGSTRQYQSKMLSVADGVIHISYPVDEQSGKTVYLLNGMQFKASFIGRDGALYMFDTEVKGEMRDP
SPMVILTYPGDKYVTRIQRRRYVRVKAKVDAAVHPLNGEFAPFVTMTIDISAGGAALLIPPTHAPLLQPGKAVELWLVLP
MRSGEYYYVKTKAKLVRIVTDEHGIAKMSVEFTDLLPQDRVRLIRYSFEQQLDEKKREKEENK

Specific function: Unknown

COG id: COG5581

COG function: function code M; Predicted glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PilZ domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009875 [H]

Pfam domain/function: PF07238 PilZ [H]

EC number: NA

Molecular weight: Translated: 25427; Mature: 25427

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIKIGDRIWLEPLDGSTRQYQSKMLSVADGVIHISYPVDEQSGKTVYLLNGMQFKASFI
CEEEECCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCEEEEEEE
GRDGALYMFDTEVKGEMRDPSPMVILTYPGDKYVTRIQRRRYVRVKAKVDAAVHPLNGEF
CCCCEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHCEEEEEEEEECEEEECCCCCC
APFVTMTIDISAGGAALLIPPTHAPLLQPGKAVELWLVLPMRSGEYYYVKTKAKLVRIVT
CEEEEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEEEEEEEEE
DEHGIAKMSVEFTDLLPQDRVRLIRYSFEQQLDEKKREKEENK
CCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMIKIGDRIWLEPLDGSTRQYQSKMLSVADGVIHISYPVDEQSGKTVYLLNGMQFKASFI
CEEEECCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCEEEEEEE
GRDGALYMFDTEVKGEMRDPSPMVILTYPGDKYVTRIQRRRYVRVKAKVDAAVHPLNGEF
CCCCEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHCEEEEEEEEECEEEECCCCCC
APFVTMTIDISAGGAALLIPPTHAPLLQPGKAVELWLVLPMRSGEYYYVKTKAKLVRIVT
CEEEEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEEEEEEEEE
DEHGIAKMSVEFTDLLPQDRVRLIRYSFEQQLDEKKREKEENK
CCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]