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The map label for this gene is aroC [H]

Identifier: 138895785

GI number: 138895785

Start: 2272305

End: 2273471

Strand: Reverse

Name: aroC [H]

Synonym: GTNG_2141

Alternate gene names: 138895785

Gene position: 2273471-2272305 (Counterclockwise)

Preceding gene: 138895786

Following gene: 138895784

Centisome position: 64.04

GC content: 56.9

Gene sequence:

>1167_bases
ATGCGTTATTTGACGGCAGGGGAGTCACATGGACCACAATTGACGGCCATTTTAGAAGGGGTGCCGGCGGGGCTCGAGCT
GCGCGCCGAGCATATTAATAAAGAGCTCGCTCGCCGGCAAAAAGGGTATGGACGCGGCCGGCGCATGCAAATTGAAAAAG
ATGAGGTCAAAATCGTCGGCGGCGTCCGCCATGGCAAAACGCTCGGCTCGCCGATTGCGCTTGTTGTTGAGAACCGTGAT
TTTCAACATTGGCAAACGATTATGGCTGTTGAGCCGATTGATGATGAAACCGAAGTCAAGCGAAAAGTAACGCGCCCGCG
CCCGGGGCATGCTGATTTAAATGGAGCCTTGAAATACGGGCATCGCGATATGCGCAACGTGCTCGAGCGCTCGTCGGCAA
GGGAAACGACTGTGCGTGTAGCCGCCGGGGCCGTGGCGAAACGTCTGCTCGAAGAGGTCGGTATTCGCGTCGCCGGACAT
GTGCTAGAAATTGGCGGCGTGCGTGCCGAGAAGCTCGATTACCGCTCACTTGACGAGCTGCAAAAAGTGACAGAGGAATC
CCCGGTGCGCTGTTTTGATCCGGAGGCAGGGCAAAAAATGATGGAAGCGATCGACTTAGCGAAGAAAAACGGTGATTCGA
TCGGCGGCATCGTCGAAGTGATCGTCGAAGGAGTGCCGGCCGGAGTTGGCAGCTATGTTCATTATGACCGGAAGCTCGAT
GCGAAAATTGCCGCTGCCATCGTCAGCATTAACGCCTTTAAAGGCGTCGAGTTCGGCATCGGATTTGAGGCGGCGCGCCG
GCCGGGAAGCGAAGTGCACGACGAAATCATTTGGAGCCCGGAACAGGGGTTTTCGCGCCGGACGAATCGAGCTGGCGGCT
TTGAAGGCGGAATGACGACCGGGATGCCGATCGTTGTGCGTGGGGTGATGAAGCCGATTCCGACGTTGTACAAGCCGCTT
GGAAGCGTCGATATCGACACGAAAGAACCGTTTACAGCGAGCATCGAGCGGTCAGACAGCTGCGCCGTACCGGCGGCAAG
CGTCGTTGCCGAGGCGGTCGTCGCTTGGGAAGTGGCGGCGGCGATCGTTGAGCAATTCGGGCAAGATCGGATTGACTTGA
TCAAAGAAAACATTGAGCGCGCTCGCCGCTATGCAAGGGAGTTTTAA

Upstream 100 bases:

>100_bases
GGGCTTTGCCCACTTTTTTTACAGAAAAACTATTTTCATTTTTTTAATTTATGATATATTTTTACATAAACGCGTTAAAG
AGCTGAAGGGAGAGACAGAT

Downstream 100 bases:

>100_bases
CGATGATGGAACGGACGATTGAAACGGCGACGAAACAATATCCGCTTCTGCTGGGTGATGGGGCGGCTCGCGCGTTGCCG
CGCCTGCTCCGCTCGCTCGC

Product: chorismate synthase

Products: NA

Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase [H]

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MRYLTAGESHGPQLTAILEGVPAGLELRAEHINKELARRQKGYGRGRRMQIEKDEVKIVGGVRHGKTLGSPIALVVENRD
FQHWQTIMAVEPIDDETEVKRKVTRPRPGHADLNGALKYGHRDMRNVLERSSARETTVRVAAGAVAKRLLEEVGIRVAGH
VLEIGGVRAEKLDYRSLDELQKVTEESPVRCFDPEAGQKMMEAIDLAKKNGDSIGGIVEVIVEGVPAGVGSYVHYDRKLD
AKIAAAIVSINAFKGVEFGIGFEAARRPGSEVHDEIIWSPEQGFSRRTNRAGGFEGGMTTGMPIVVRGVMKPIPTLYKPL
GSVDIDTKEPFTASIERSDSCAVPAASVVAEAVVAWEVAAAIVEQFGQDRIDLIKENIERARRYAREF

Sequences:

>Translated_388_residues
MRYLTAGESHGPQLTAILEGVPAGLELRAEHINKELARRQKGYGRGRRMQIEKDEVKIVGGVRHGKTLGSPIALVVENRD
FQHWQTIMAVEPIDDETEVKRKVTRPRPGHADLNGALKYGHRDMRNVLERSSARETTVRVAAGAVAKRLLEEVGIRVAGH
VLEIGGVRAEKLDYRSLDELQKVTEESPVRCFDPEAGQKMMEAIDLAKKNGDSIGGIVEVIVEGVPAGVGSYVHYDRKLD
AKIAAAIVSINAFKGVEFGIGFEAARRPGSEVHDEIIWSPEQGFSRRTNRAGGFEGGMTTGMPIVVRGVMKPIPTLYKPL
GSVDIDTKEPFTASIERSDSCAVPAASVVAEAVVAWEVAAAIVEQFGQDRIDLIKENIERARRYAREF
>Mature_388_residues
MRYLTAGESHGPQLTAILEGVPAGLELRAEHINKELARRQKGYGRGRRMQIEKDEVKIVGGVRHGKTLGSPIALVVENRD
FQHWQTIMAVEPIDDETEVKRKVTRPRPGHADLNGALKYGHRDMRNVLERSSARETTVRVAAGAVAKRLLEEVGIRVAGH
VLEIGGVRAEKLDYRSLDELQKVTEESPVRCFDPEAGQKMMEAIDLAKKNGDSIGGIVEVIVEGVPAGVGSYVHYDRKLD
AKIAAAIVSINAFKGVEFGIGFEAARRPGSEVHDEIIWSPEQGFSRRTNRAGGFEGGMTTGMPIVVRGVMKPIPTLYKPL
GSVDIDTKEPFTASIERSDSCAVPAASVVAEAVVAWEVAAAIVEQFGQDRIDLIKENIERARRYAREF

Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]

COG id: COG0082

COG function: function code E; Chorismate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chorismate synthase family [H]

Homologues:

Organism=Escherichia coli, GI1788669, Length=370, Percent_Identity=38.1081081081081, Blast_Score=184, Evalue=1e-47,
Organism=Saccharomyces cerevisiae, GI6321290, Length=381, Percent_Identity=33.5958005249344, Blast_Score=178, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000453
- InterPro:   IPR020541 [H]

Pfam domain/function: PF01264 Chorismate_synt [H]

EC number: =4.2.3.5 [H]

Molecular weight: Translated: 42548; Mature: 42548

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: PS00787 CHORISMATE_SYNTHASE_1 ; PS00788 CHORISMATE_SYNTHASE_2 ; PS00789 CHORISMATE_SYNTHASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLTAGESHGPQLTAILEGVPAGLELRAEHINKELARRQKGYGRGRRMQIEKDEVKIVG
CCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEE
GVRHGKTLGSPIALVVENRDFQHWQTIMAVEPIDDETEVKRKVTRPRPGHADLNGALKYG
CCCCCCCCCCCEEEEEECCCHHHHHHHHEECCCCCHHHHHHHHCCCCCCCCCCCHHHHHC
HRDMRNVLERSSARETTVRVAAGAVAKRLLEEVGIRVAGHVLEIGGVRAEKLDYRSLDEL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHCCCCCHHHH
QKVTEESPVRCFDPEAGQKMMEAIDLAKKNGDSIGGIVEVIVEGVPAGVGSYVHYDRKLD
HHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHCCCHHH
AKIAAAIVSINAFKGVEFGIGFEAARRPGSEVHDEIIWSPEQGFSRRTNRAGGFEGGMTT
HHHHHHHHHHHHHCCCEECCCHHHHCCCCHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCC
GMPIVVRGVMKPIPTLYKPLGSVDIDTKEPFTASIERSDSCAVPAASVVAEAVVAWEVAA
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHH
AIVEQFGQDRIDLIKENIERARRYAREF
HHHHHHCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRYLTAGESHGPQLTAILEGVPAGLELRAEHINKELARRQKGYGRGRRMQIEKDEVKIVG
CCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEE
GVRHGKTLGSPIALVVENRDFQHWQTIMAVEPIDDETEVKRKVTRPRPGHADLNGALKYG
CCCCCCCCCCCEEEEEECCCHHHHHHHHEECCCCCHHHHHHHHCCCCCCCCCCCHHHHHC
HRDMRNVLERSSARETTVRVAAGAVAKRLLEEVGIRVAGHVLEIGGVRAEKLDYRSLDEL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHCCCCCHHHH
QKVTEESPVRCFDPEAGQKMMEAIDLAKKNGDSIGGIVEVIVEGVPAGVGSYVHYDRKLD
HHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHCCCHHH
AKIAAAIVSINAFKGVEFGIGFEAARRPGSEVHDEIIWSPEQGFSRRTNRAGGFEGGMTT
HHHHHHHHHHHHHCCCEECCCHHHHCCCCHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCC
GMPIVVRGVMKPIPTLYKPLGSVDIDTKEPFTASIERSDSCAVPAASVVAEAVVAWEVAA
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHH
AIVEQFGQDRIDLIKENIERARRYAREF
HHHHHHCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA