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The map label for this gene is ypjH [H]

Identifier: 138895760

GI number: 138895760

Start: 2249905

End: 2251041

Strand: Reverse

Name: ypjH [H]

Synonym: GTNG_2116

Alternate gene names: 138895760

Gene position: 2251041-2249905 (Counterclockwise)

Preceding gene: 138895761

Following gene: 138895759

Centisome position: 63.4

GC content: 52.42

Gene sequence:

>1137_bases
ATGAAGCTGAAAATAGGAATTGTCTGTTATCCGACGGTCGGAGGCTCAGGGGTCGTTGCCACTGAGCTCGGCAAACTGCT
TGCCGAAAGAGGACATGAAATTCATTTTATTTCGTCAAGCATGCCGTTTCGGCTGAACAAAGTATACGGAAACATTTACT
ACCATGAGGTGAGCGTCAACCAATATTCTGTTTTTCAATATCCGCCGTATGACTTGGCGCTAGCGAGCAAAATCGCTGAG
GTAGCGAAGCGGGAACAGCTCGATGTGCTTCATGCCCATTACGCCGTTCCACACGCAGTCTGCGCCGTACTGGCGCGGCA
AATGGTTGGCGAACTGCCGATCGTCACAACGTTGCACGGCACCGATATCACCGTGTTAGGCTACGACCCGTCGCTTTCCG
ATATGATCAAGTTCGGCATCGAGCAGTCGGACATCGTCACAGCGGTGTCTAGCGCCCTTGTTCAGCAGACGTACGAACTG
CTTGATGTGCGAAAAGAGATCCATACAGTTTACAATTTTGTTGACGAACGCGTCTACCACCGTCGGGAAGCGAGCCATTT
GCGACAGGAGTACGGCATCGGTGAAACGGAGAACGTCATCATTCACGTTTCTAATTTCCGGAAAGTAAAGCGCGTGCCTG
ATGTGGTGCGCGCGTTTGCCATCGTGCGTCAGCATGTGCCGGCCAAGCTCTTGCTTGTCGGCGACGGCCCGGAAATGACT
GTCGTCTGCCGTCTCGTCAAAGAACTCGGGCTCAACGACGACGTCCGATTTTTAGGGAAACAGGACAAACTGGAAGAGCT
GTATTCGATCAGTGATGTGATGATGCTCTTGTCGGAAAAAGAAAGTTTCGGGCTCGTTTTACTAGAGGCGATGGCGTGTG
GCATCCCGTGCATTGGCACGGCGATTGGTGGCATTCCGGAAGTGATTGAAGATGGAAAAAGCGGCTTTTTATGTGCGCTT
GGCGATGTCGAAGAAGCGGCTCAAAAAGCGCTCGCACTGCTAACCGACCGCCGTTTGCATAGCGAAATGGCAAAAGAGGC
GGTGCGAACGGTCGAGCAAAAGTTCCGTTCGTCCGATATCGTCGGGCAGTATGAGCAGCTGTATGCTTCACTGGCAGCAA
GGAAGGTGAGAGGATGA

Upstream 100 bases:

>100_bases
GCCGCGAGCGCTGGTTCGGCCAGCAAATCGGTGCGGAGTATGCCGAAGGCTTTTTGGCAAAAACACCTATTCATCTTTTC
GACTTATTTGAGGGAGTGCG

Downstream 100 bases:

>100_bases
AACCGCCATTCCAACAGGCGCTTGGTATCATCCGACAGCTAAATCGGCATGGCTATGAGGCATATTTTGTCGGCGGCGCG
GTGCGCGATCTGTTGCTTGG

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MKLKIGIVCYPTVGGSGVVATELGKLLAERGHEIHFISSSMPFRLNKVYGNIYYHEVSVNQYSVFQYPPYDLALASKIAE
VAKREQLDVLHAHYAVPHAVCAVLARQMVGELPIVTTLHGTDITVLGYDPSLSDMIKFGIEQSDIVTAVSSALVQQTYEL
LDVRKEIHTVYNFVDERVYHRREASHLRQEYGIGETENVIIHVSNFRKVKRVPDVVRAFAIVRQHVPAKLLLVGDGPEMT
VVCRLVKELGLNDDVRFLGKQDKLEELYSISDVMMLLSEKESFGLVLLEAMACGIPCIGTAIGGIPEVIEDGKSGFLCAL
GDVEEAAQKALALLTDRRLHSEMAKEAVRTVEQKFRSSDIVGQYEQLYASLAARKVRG

Sequences:

>Translated_378_residues
MKLKIGIVCYPTVGGSGVVATELGKLLAERGHEIHFISSSMPFRLNKVYGNIYYHEVSVNQYSVFQYPPYDLALASKIAE
VAKREQLDVLHAHYAVPHAVCAVLARQMVGELPIVTTLHGTDITVLGYDPSLSDMIKFGIEQSDIVTAVSSALVQQTYEL
LDVRKEIHTVYNFVDERVYHRREASHLRQEYGIGETENVIIHVSNFRKVKRVPDVVRAFAIVRQHVPAKLLLVGDGPEMT
VVCRLVKELGLNDDVRFLGKQDKLEELYSISDVMMLLSEKESFGLVLLEAMACGIPCIGTAIGGIPEVIEDGKSGFLCAL
GDVEEAAQKALALLTDRRLHSEMAKEAVRTVEQKFRSSDIVGQYEQLYASLAARKVRG
>Mature_378_residues
MKLKIGIVCYPTVGGSGVVATELGKLLAERGHEIHFISSSMPFRLNKVYGNIYYHEVSVNQYSVFQYPPYDLALASKIAE
VAKREQLDVLHAHYAVPHAVCAVLARQMVGELPIVTTLHGTDITVLGYDPSLSDMIKFGIEQSDIVTAVSSALVQQTYEL
LDVRKEIHTVYNFVDERVYHRREASHLRQEYGIGETENVIIHVSNFRKVKRVPDVVRAFAIVRQHVPAKLLLVGDGPEMT
VVCRLVKELGLNDDVRFLGKQDKLEELYSISDVMMLLSEKESFGLVLLEAMACGIPCIGTAIGGIPEVIEDGKSGFLCAL
GDVEEAAQKALALLTDRRLHSEMAKEAVRTVEQKFRSSDIVGQYEQLYASLAARKVRG

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 41959; Mature: 41959

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKIGIVCYPTVGGSGVVATELGKLLAERGHEIHFISSSMPFRLNKVYGNIYYHEVSVN
CEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECEEEEEEEECC
QYSVFQYPPYDLALASKIAEVAKREQLDVLHAHYAVPHAVCAVLARQMVGELPIVTTLHG
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
TDITVLGYDPSLSDMIKFGIEQSDIVTAVSSALVQQTYELLDVRKEIHTVYNFVDERVYH
CEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RREASHLRQEYGIGETENVIIHVSNFRKVKRVPDVVRAFAIVRQHVPAKLLLVGDGPEMT
HHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHH
VVCRLVKELGLNDDVRFLGKQDKLEELYSISDVMMLLSEKESFGLVLLEAMACGIPCIGT
HHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHH
AIGGIPEVIEDGKSGFLCALGDVEEAAQKALALLTDRRLHSEMAKEAVRTVEQKFRSSDI
HHCCCHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
VGQYEQLYASLAARKVRG
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLKIGIVCYPTVGGSGVVATELGKLLAERGHEIHFISSSMPFRLNKVYGNIYYHEVSVN
CEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECEEEEEEEECC
QYSVFQYPPYDLALASKIAEVAKREQLDVLHAHYAVPHAVCAVLARQMVGELPIVTTLHG
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
TDITVLGYDPSLSDMIKFGIEQSDIVTAVSSALVQQTYELLDVRKEIHTVYNFVDERVYH
CEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RREASHLRQEYGIGETENVIIHVSNFRKVKRVPDVVRAFAIVRQHVPAKLLLVGDGPEMT
HHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHH
VVCRLVKELGLNDDVRFLGKQDKLEELYSISDVMMLLSEKESFGLVLLEAMACGIPCIGT
HHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHH
AIGGIPEVIEDGKSGFLCALGDVEEAAQKALALLTDRRLHSEMAKEAVRTVEQKFRSSDI
HHCCCHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
VGQYEQLYASLAARKVRG
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]