Click here to switch to the map view.

The map label for this gene is ypmA [H]

Identifier: 138895753

GI number: 138895753

Start: 2242035

End: 2242364

Strand: Reverse

Name: ypmA [H]

Synonym: GTNG_2109

Alternate gene names: 138895753

Gene position: 2242364-2242035 (Counterclockwise)

Preceding gene: 138895754

Following gene: 138895752

Centisome position: 63.16

GC content: 48.18

Gene sequence:

>330_bases
ATGGCAGCTTGCAGCCTCGCCGTTTACCTTCGCCGGCTCGGCCGCAGAGGCGTGAAGAAGCGCAACTGTGATCATAACCT
TACTGTATTTGTATTGTTGCCGGAGCCGCCGGCGTGTATAAGTAACAAAATTTGCGCCGTACAGGAGGAAACAACGAAAA
TGGAAAGCAAAATTGAAGTGCTCGCCACCGTCAAAATCCAGCATTCCGATGATTTGTACAAAATTGTTGACTGCTTGAAT
CGGACGCTGAAGCGCGACAATTTGATGTTTGGGCTTGCTTTGGATGAAAACGATAAACGCCAAGCGGTCTTTACGATTTA
TCGGACGTGA

Upstream 100 bases:

>100_bases
GGGGAGAAAAGAAGCAAATTTGCGTTGGAGGTGTAGGCGGGCAAATTTGTTATGAAATGGTCAGGCAAACCTGCTATAAT
AGGGAAGAAGCACAACTGCG

Downstream 100 bases:

>100_bases
TCGCCATGAAAAAGTGGGGATGGCTTGCTCTAATTTTTTTGGGTATCCTCATTTGGCAGGCATGGTCGATTTACGGTGAG
GCGATGGTGCCAAAACGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MAACSLAVYLRRLGRRGVKKRNCDHNLTVFVLLPEPPACISNKICAVQEETTKMESKIEVLATVKIQHSDDLYKIVDCLN
RTLKRDNLMFGLALDENDKRQAVFTIYRT

Sequences:

>Translated_109_residues
MAACSLAVYLRRLGRRGVKKRNCDHNLTVFVLLPEPPACISNKICAVQEETTKMESKIEVLATVKIQHSDDLYKIVDCLN
RTLKRDNLMFGLALDENDKRQAVFTIYRT
>Mature_108_residues
AACSLAVYLRRLGRRGVKKRNCDHNLTVFVLLPEPPACISNKICAVQEETTKMESKIEVLATVKIQHSDDLYKIVDCLNR
TLKRDNLMFGLALDENDKRQAVFTIYRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012190 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12471; Mature: 12340

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAACSLAVYLRRLGRRGVKKRNCDHNLTVFVLLPEPPACISNKICAVQEETTKMESKIEV
CCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHCCCEEEECHHHHHHHHHEEE
LATVKIQHSDDLYKIVDCLNRTLKRDNLMFGLALDENDKRQAVFTIYRT
EEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEC
>Mature Secondary Structure 
AACSLAVYLRRLGRRGVKKRNCDHNLTVFVLLPEPPACISNKICAVQEETTKMESKIEV
CHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHCCCEEEECHHHHHHHHHEEE
LATVKIQHSDDLYKIVDCLNRTLKRDNLMFGLALDENDKRQAVFTIYRT
EEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]