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The map label for this gene is ypmB [H]

Identifier: 138895752

GI number: 138895752

Start: 2241550

End: 2242029

Strand: Reverse

Name: ypmB [H]

Synonym: GTNG_2108

Alternate gene names: 138895752

Gene position: 2242029-2241550 (Counterclockwise)

Preceding gene: 138895753

Following gene: 138895751

Centisome position: 63.15

GC content: 48.33

Gene sequence:

>480_bases
ATGAAAAAGTGGGGATGGCTTGCTCTAATTTTTTTGGGTATCCTCATTTGGCAGGCATGGTCGATTTACGGTGAGGCGAT
GGTGCCAAAACGGTCAATGGTGGAAAAAGCGTTTGCGCGGGCGAAGGAAGCGGTTGGGCTTGTCGACGTGAAGAAAGTCT
ATACATATTATGGCGATGAAGCATGCACCGTATTCATCGGCCGGACGAAACAAGAGGAGACAGACGTCGTTGTTTGGGTG
CCGGAAAAAAAGGGGGATATCGTCGTCAAGAAAGCAAATAGCGGCATTAGCGAAGCGGAAGCACGCGCCATTTTACAACG
CGACCGACATCCGCAACGCGTGATTGACGTGACGCTTGGCATGGAAAAGGGCGTACCTCTTTGGGAGTTGACATATATCG
ATGCAGAAGGAAGGTATTCGTTTTATTACCTCCATTTTGCCGATGGTTCATTCTTAAAGAGGTACAGTTTTCAACGTTGA

Upstream 100 bases:

>100_bases
TGAATCGGACGCTGAAGCGCGACAATTTGATGTTTGGGCTTGCTTTGGATGAAAACGATAAACGCCAAGCGGTCTTTACG
ATTTATCGGACGTGATCGCC

Downstream 100 bases:

>100_bases
GCATATGAGGGGGAAGAAACGATGAAATTGGCAAAACGGGTGGCGTCGCTGACGCCATCGGCGACTTTGGCCATTACGGC
GAAAGCAAAAGAACTAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MKKWGWLALIFLGILIWQAWSIYGEAMVPKRSMVEKAFARAKEAVGLVDVKKVYTYYGDEACTVFIGRTKQEETDVVVWV
PEKKGDIVVKKANSGISEAEARAILQRDRHPQRVIDVTLGMEKGVPLWELTYIDAEGRYSFYYLHFADGSFLKRYSFQR

Sequences:

>Translated_159_residues
MKKWGWLALIFLGILIWQAWSIYGEAMVPKRSMVEKAFARAKEAVGLVDVKKVYTYYGDEACTVFIGRTKQEETDVVVWV
PEKKGDIVVKKANSGISEAEARAILQRDRHPQRVIDVTLGMEKGVPLWELTYIDAEGRYSFYYLHFADGSFLKRYSFQR
>Mature_159_residues
MKKWGWLALIFLGILIWQAWSIYGEAMVPKRSMVEKAFARAKEAVGLVDVKKVYTYYGDEACTVFIGRTKQEETDVVVWV
PEKKGDIVVKKANSGISEAEARAILQRDRHPQRVIDVTLGMEKGVPLWELTYIDAEGRYSFYYLHFADGSFLKRYSFQR

Specific function: Unknown

COG id: COG5353

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015801
- InterPro:   IPR005075 [H]

Pfam domain/function: PF03413 PepSY [H]

EC number: NA

Molecular weight: Translated: 18364; Mature: 18364

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWGWLALIFLGILIWQAWSIYGEAMVPKRSMVEKAFARAKEAVGLVDVKKVYTYYGDE
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
ACTVFIGRTKQEETDVVVWVPEKKGDIVVKKANSGISEAEARAILQRDRHPQRVIDVTLG
EEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEC
MEKGVPLWELTYIDAEGRYSFYYLHFADGSFLKRYSFQR
CCCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHCCCCC
>Mature Secondary Structure
MKKWGWLALIFLGILIWQAWSIYGEAMVPKRSMVEKAFARAKEAVGLVDVKKVYTYYGDE
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
ACTVFIGRTKQEETDVVVWVPEKKGDIVVKKANSGISEAEARAILQRDRHPQRVIDVTLG
EEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEC
MEKGVPLWELTYIDAEGRYSFYYLHFADGSFLKRYSFQR
CCCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]