Click here to switch to the map view.

The map label for this gene is yhfC [H]

Identifier: 138895672

GI number: 138895672

Start: 2146415

End: 2147197

Strand: Reverse

Name: yhfC [H]

Synonym: GTNG_2028

Alternate gene names: 138895672

Gene position: 2147197-2146415 (Counterclockwise)

Preceding gene: 138895673

Following gene: 138895671

Centisome position: 60.48

GC content: 54.02

Gene sequence:

>783_bases
ATGGGGATTATAGGCGCAGTCACACAGCTTCTTGTGTCGTTGCTCGTTCCGCTCGGACTTGTATGGTACGGGAGAAAAAA
AGGGTGGCTTTCGTGGAAAGCGCTCGGCATCGGGGCACTGATCTTTCTCGTTTTTTCACAAGTGTTGGAAAAAGCCCTTC
ATATCGCTGTCCTTGAACCGGGGCGACCGGCGCTGAAAGGAACGGAAAGCGTCACGCTCTTTGTCTTGTACGCTGCGCTT
GCCGCCGGTGTGTTTGAGGAAATCGGCCGTTATGTCGGATTTCGCTGGCTGTTGAAACAAAAACGCTCATATGGCGATGG
CTTGTCATTCGGGCTTGGGCACGGTGGGGTGGAAGCGGTGTTGCTTGGCGTGTTGGGCGCTGTGAACGTCATCGTGCTCA
TGAGCCTCATCCAATCAGGAGTCTTTGATAAAACGATTGCCCCGTCGCTTCCGGCGGACCAAGCGGAGCTAATTAAGGAA
CAAGTGTTGCACACGCCGTTGGCGATGTATGTGTTGGGCGGTTTAGAACGGTTGTTTGCCTTGGCCGTGCATGTGGCGTT
ATCGCTGCTCGTTTTGCTTGGCGTGCGCAAGCGGCAATTCCGTTATGTCCTGTATGCAATTTTGCTCCATGCTGCGTTGG
ACGTCTTGCCGGCGTTGTACCAAGCGAAAGTCGTCACAAACATCTGGGTGGTCGAGGCAGTGTTGTTGGTGTGGGCGGTT
GCTGCCGTTTTGTTCATTCGCCGGATCAAGCCAGCCTTTGAACAGGGGGAAGAGAAACGATGA

Upstream 100 bases:

>100_bases
TGCTCATCATAATTTTGGGTAATTTGTATTTAATCATTCAGTCGTTCATCTATTTTCGTCATGAACAGCGCAAGCGTTCA
TCATAGATAGGAGGGGACTC

Downstream 100 bases:

>100_bases
TTCGTGTCAAACGACTTGATCATGTGCAAATTTGTATTCCATTTGGCGCTGAAGATGAGGCGCGTGCGTTTTATACGGGC
GTGCTCGGTTTCAAGGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MGIIGAVTQLLVSLLVPLGLVWYGRKKGWLSWKALGIGALIFLVFSQVLEKALHIAVLEPGRPALKGTESVTLFVLYAAL
AAGVFEEIGRYVGFRWLLKQKRSYGDGLSFGLGHGGVEAVLLGVLGAVNVIVLMSLIQSGVFDKTIAPSLPADQAELIKE
QVLHTPLAMYVLGGLERLFALAVHVALSLLVLLGVRKRQFRYVLYAILLHAALDVLPALYQAKVVTNIWVVEAVLLVWAV
AAVLFIRRIKPAFEQGEEKR

Sequences:

>Translated_260_residues
MGIIGAVTQLLVSLLVPLGLVWYGRKKGWLSWKALGIGALIFLVFSQVLEKALHIAVLEPGRPALKGTESVTLFVLYAAL
AAGVFEEIGRYVGFRWLLKQKRSYGDGLSFGLGHGGVEAVLLGVLGAVNVIVLMSLIQSGVFDKTIAPSLPADQAELIKE
QVLHTPLAMYVLGGLERLFALAVHVALSLLVLLGVRKRQFRYVLYAILLHAALDVLPALYQAKVVTNIWVVEAVLLVWAV
AAVLFIRRIKPAFEQGEEKR
>Mature_259_residues
GIIGAVTQLLVSLLVPLGLVWYGRKKGWLSWKALGIGALIFLVFSQVLEKALHIAVLEPGRPALKGTESVTLFVLYAALA
AGVFEEIGRYVGFRWLLKQKRSYGDGLSFGLGHGGVEAVLLGVLGAVNVIVLMSLIQSGVFDKTIAPSLPADQAELIKEQ
VLHTPLAMYVLGGLERLFALAVHVALSLLVLLGVRKRQFRYVLYAILLHAALDVLPALYQAKVVTNIWVVEAVLLVWAVA
AVLFIRRIKPAFEQGEEKR

Specific function: Unknown

COG id: COG4377

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011397 [H]

Pfam domain/function: PF10086 DUF2324 [H]

EC number: NA

Molecular weight: Translated: 28328; Mature: 28197

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GIIGAVTQLLVSLLVPLGLVWYGRKKGWLSWKALGIGALIFLVFSQVLEKALHIAVLEP
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GRPALKGTESVTLFVLYAALAAGVFEEIGRYVGFRWLLKQKRSYGDGLSFGLGHGGVEAV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
LLGVLGAVNVIVLMSLIQSGVFDKTIAPSLPADQAELIKEQVLHTPLAMYVLGGLERLFA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVHVALSLLVLLGVRKRQFRYVLYAILLHAALDVLPALYQAKVVTNIWVVEAVLLVWAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVLFIRRIKPAFEQGEEKR
HHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]