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The map label for this gene is dppA [C]

Identifier: 138895643

GI number: 138895643

Start: 2114619

End: 2116208

Strand: Reverse

Name: dppA [C]

Synonym: GTNG_1999

Alternate gene names: 138895643

Gene position: 2116208-2114619 (Counterclockwise)

Preceding gene: 138895644

Following gene: 138895642

Centisome position: 59.61

GC content: 39.25

Gene sequence:

>1590_bases
ATGAGAGGAGTATATTCATTTCTCTTTATTCTCCTGATCATTATTGGTTTAATGGGATGTTCAAATAGCTCGTCCACAGG
AAAAACAAGTCAATCTAATTCTTCAGGGAGCTCCCAATCTGGTCAGTCTGGAGGAAAGCTTGATATTGCTTATGAAGCTC
AACCGGATACGTTAGACCCAACGGTCACTACGTCTGGAGCGACGAAAGATACTGCACGATTAATGTATGAATCTTTGTTG
ACCCTTGATGAAAACTGGACAGTAGCTCCTCAGCTAGCAGAAAGTTATAACGTTAGTGATGACGGAAAAGTCTATACGTT
TAAACTGAGACAAGGGATTAAATTTCATAACGGGAAGGAAATGACAGCTGACGATGTAGTGGCCTCGATGGAAAGGTGGA
CTACCAATTCCTCACTTACGAAATCGATTTTAGAAGGGGCAGAATGGAAAAAAGTTGATGATTATACAGTTGAGCTTCAT
CTGACCAAATCATCGGCGCTAGTGCCCTTTGCTCTAGCCGATCAAAATCAGCTTGCTGCTATAATGCCTAAAGAGGTTGC
AGAAAAAGCTGGACCAACAGGAGCAACAGAATATGTAGGAACAGGCCCATTTAAATTTGTGGAATGGAAGACTAACCAGT
ATATTCATTTTACGAAATTTGAAGATTATCAACCTCGTTCCGAACAAACAAGTGGTCTCGCAGGGAAAAAAGAGGCTTTA
GTCAATGATATCTATTGGCACTTCGTTCCAGATGAATCAACTCGAAATGCAGGTTTAATTAGTGGTCAATATGATATTGC
TACAGGTGTATCGTACGACACCGTTGAACAACTGGAAAATACTCCAGGGACAGGTGTAAATATCCACACTTATGGAATTC
AAATGCTCGTTTTTAATAAAAAGCAGGGTCTGTTCAGTGATGTAAAAGCTCGGCAGGCTGTAAATTATGCATTAGATAAA
GAATTGGTTTTACGTTCTTCTTTTGGAGATGAGCGATTTTATAAATTGGAGCCGAGTTTATTCAGGCCTGAACAGACAGA
TTGGTATTCAGATGCTGGAAAAGACGTATACAATAAGAAAGATCTTGAATTAGCCAAGAAATTATTAAAAGAAGCTAATT
ATAACGGAGAAGAGATTGTTATTTTGACGAGCCGTGATTACGCTTATCAGTATAATGCTGCAGTAGCTACTCAACAGCTT
TTGGAAAAGATAGGGATAAAAGCAAAGCTTGAAGTTTATGATTGGGGAACATTGCTAGAGCGTCGCGGTGATCCTGCACT
TTGGGATATCTTCTTTACAGGATGGGATACATCCGTTATTCCTCATCAATATGGATTTTTAGATTCGAAAGCACAATGGC
CAGGTTGGACGAATAGTCCTGAGATCGATAAATTATTATCTGAGATTCAAGCGGCTAAAACACAAGACGAGGCCAAAGAG
CTATATAGCCAGTTACAGCAAAAAATGTGGGAATATCTACCGATTATCAATATAGGAACTTACAGCAAAGTCACTGGTGT
ATCTGATAAAGTCAAGGGATTTAGAGATTTTATTGGACCAGTGTTATGGAATGTTAGTGTAGAAGAGTAA

Upstream 100 bases:

>100_bases
GTTATCGTGAGCTCTGCCTTGCCATACCTGAGAGTCGTTGCGTTTTTTAAAAGGCATTCGCTTAATCAAGAGAATAAGGG
GGTTATGATTTGTGAGACGA

Downstream 100 bases:

>100_bases
TTCAGAATGATCAAAAAGTTATGATCGAGATTACAAGAGTTAAAAAATGGAATTGTTGCATCTTCTGGTAATTTCCACAA
ATGTTCGATCGGGTTAAGAT

Product: ABC transporter peptide-binding protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MRGVYSFLFILLIIIGLMGCSNSSSTGKTSQSNSSGSSQSGQSGGKLDIAYEAQPDTLDPTVTTSGATKDTARLMYESLL
TLDENWTVAPQLAESYNVSDDGKVYTFKLRQGIKFHNGKEMTADDVVASMERWTTNSSLTKSILEGAEWKKVDDYTVELH
LTKSSALVPFALADQNQLAAIMPKEVAEKAGPTGATEYVGTGPFKFVEWKTNQYIHFTKFEDYQPRSEQTSGLAGKKEAL
VNDIYWHFVPDESTRNAGLISGQYDIATGVSYDTVEQLENTPGTGVNIHTYGIQMLVFNKKQGLFSDVKARQAVNYALDK
ELVLRSSFGDERFYKLEPSLFRPEQTDWYSDAGKDVYNKKDLELAKKLLKEANYNGEEIVILTSRDYAYQYNAAVATQQL
LEKIGIKAKLEVYDWGTLLERRGDPALWDIFFTGWDTSVIPHQYGFLDSKAQWPGWTNSPEIDKLLSEIQAAKTQDEAKE
LYSQLQQKMWEYLPIINIGTYSKVTGVSDKVKGFRDFIGPVLWNVSVEE

Sequences:

>Translated_529_residues
MRGVYSFLFILLIIIGLMGCSNSSSTGKTSQSNSSGSSQSGQSGGKLDIAYEAQPDTLDPTVTTSGATKDTARLMYESLL
TLDENWTVAPQLAESYNVSDDGKVYTFKLRQGIKFHNGKEMTADDVVASMERWTTNSSLTKSILEGAEWKKVDDYTVELH
LTKSSALVPFALADQNQLAAIMPKEVAEKAGPTGATEYVGTGPFKFVEWKTNQYIHFTKFEDYQPRSEQTSGLAGKKEAL
VNDIYWHFVPDESTRNAGLISGQYDIATGVSYDTVEQLENTPGTGVNIHTYGIQMLVFNKKQGLFSDVKARQAVNYALDK
ELVLRSSFGDERFYKLEPSLFRPEQTDWYSDAGKDVYNKKDLELAKKLLKEANYNGEEIVILTSRDYAYQYNAAVATQQL
LEKIGIKAKLEVYDWGTLLERRGDPALWDIFFTGWDTSVIPHQYGFLDSKAQWPGWTNSPEIDKLLSEIQAAKTQDEAKE
LYSQLQQKMWEYLPIINIGTYSKVTGVSDKVKGFRDFIGPVLWNVSVEE
>Mature_529_residues
MRGVYSFLFILLIIIGLMGCSNSSSTGKTSQSNSSGSSQSGQSGGKLDIAYEAQPDTLDPTVTTSGATKDTARLMYESLL
TLDENWTVAPQLAESYNVSDDGKVYTFKLRQGIKFHNGKEMTADDVVASMERWTTNSSLTKSILEGAEWKKVDDYTVELH
LTKSSALVPFALADQNQLAAIMPKEVAEKAGPTGATEYVGTGPFKFVEWKTNQYIHFTKFEDYQPRSEQTSGLAGKKEAL
VNDIYWHFVPDESTRNAGLISGQYDIATGVSYDTVEQLENTPGTGVNIHTYGIQMLVFNKKQGLFSDVKARQAVNYALDK
ELVLRSSFGDERFYKLEPSLFRPEQTDWYSDAGKDVYNKKDLELAKKLLKEANYNGEEIVILTSRDYAYQYNAAVATQQL
LEKIGIKAKLEVYDWGTLLERRGDPALWDIFFTGWDTSVIPHQYGFLDSKAQWPGWTNSPEIDKLLSEIQAAKTQDEAKE
LYSQLQQKMWEYLPIINIGTYSKVTGVSDKVKGFRDFIGPVLWNVSVEE

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789966, Length=530, Percent_Identity=27.9245283018868, Blast_Score=138, Evalue=8e-34,
Organism=Escherichia coli, GI1787052, Length=485, Percent_Identity=28.8659793814433, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI1789887, Length=466, Percent_Identity=25.3218884120172, Blast_Score=108, Evalue=9e-25,
Organism=Escherichia coli, GI1787495, Length=499, Percent_Identity=23.6472945891784, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1787551, Length=356, Percent_Identity=23.314606741573, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787762, Length=501, Percent_Identity=24.750499001996, Blast_Score=81, Evalue=2e-16,

Paralogues:

None

Copy number: 660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 59309; Mature: 59309

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGVYSFLFILLIIIGLMGCSNSSSTGKTSQSNSSGSSQSGQSGGKLDIAYEAQPDTLDP
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
TVTTSGATKDTARLMYESLLTLDENWTVAPQLAESYNVSDDGKVYTFKLRQGIKFHNGKE
CEECCCCCHHHHHHHHHHHHHCCCCCEECHHHHHHCCCCCCCCEEEEEECCCCEECCCCC
MTADDVVASMERWTTNSSLTKSILEGAEWKKVDDYTVELHLTKSSALVPFALADQNQLAA
CCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCEEE
IMPKEVAEKAGPTGATEYVGTGPFKFVEWKTNQYIHFTKFEDYQPRSEQTSGLAGKKEAL
CCCHHHHHHCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCHHHCCCCCHHHHH
VNDIYWHFVPDESTRNAGLISGQYDIATGVSYDTVEQLENTPGTGVNIHTYGIQMLVFNK
HHHEEEEECCCCCCCCCCEEECCCHHCCCCCHHHHHHHHCCCCCCEEEEEEEEEEEEEEC
KQGLFSDVKARQAVNYALDKELVLRSSFGDERFYKLEPSLFRPEQTDWYSDAGKDVYNKK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCH
DLELAKKLLKEANYNGEEIVILTSRDYAYQYNAAVATQQLLEKIGIKAKLEVYDWGTLLE
HHHHHHHHHHHCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHCCEEEEEEEEHHHHHH
RRGDPALWDIFFTGWDTSVIPHQYGFLDSKAQWPGWTNSPEIDKLLSEIQAAKTQDEAKE
CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHH
LYSQLQQKMWEYLPIINIGTYSKVTGVSDKVKGFRDFIGPVLWNVSVEE
HHHHHHHHHHHHCCEEECCCCCHHCCCHHHHHHHHHHHHHHEEEEEECC
>Mature Secondary Structure
MRGVYSFLFILLIIIGLMGCSNSSSTGKTSQSNSSGSSQSGQSGGKLDIAYEAQPDTLDP
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
TVTTSGATKDTARLMYESLLTLDENWTVAPQLAESYNVSDDGKVYTFKLRQGIKFHNGKE
CEECCCCCHHHHHHHHHHHHHCCCCCEECHHHHHHCCCCCCCCEEEEEECCCCEECCCCC
MTADDVVASMERWTTNSSLTKSILEGAEWKKVDDYTVELHLTKSSALVPFALADQNQLAA
CCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCEEE
IMPKEVAEKAGPTGATEYVGTGPFKFVEWKTNQYIHFTKFEDYQPRSEQTSGLAGKKEAL
CCCHHHHHHCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCHHHCCCCCHHHHH
VNDIYWHFVPDESTRNAGLISGQYDIATGVSYDTVEQLENTPGTGVNIHTYGIQMLVFNK
HHHEEEEECCCCCCCCCCEEECCCHHCCCCCHHHHHHHHCCCCCCEEEEEEEEEEEEEEC
KQGLFSDVKARQAVNYALDKELVLRSSFGDERFYKLEPSLFRPEQTDWYSDAGKDVYNKK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCH
DLELAKKLLKEANYNGEEIVILTSRDYAYQYNAAVATQQLLEKIGIKAKLEVYDWGTLLE
HHHHHHHHHHHCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHCCEEEEEEEEHHHHHH
RRGDPALWDIFFTGWDTSVIPHQYGFLDSKAQWPGWTNSPEIDKLLSEIQAAKTQDEAKE
CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHH
LYSQLQQKMWEYLPIINIGTYSKVTGVSDKVKGFRDFIGPVLWNVSVEE
HHHHHHHHHHHHCCEEECCCCCHHCCCHHHHHHHHHHHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]