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The map label for this gene is insF1 [C]

Identifier: 138895250

GI number: 138895250

Start: 1678296

End: 1679063

Strand: Direct

Name: insF1 [C]

Synonym: GTNG_1592

Alternate gene names: 138895250

Gene position: 1678296-1679063 (Clockwise)

Preceding gene: 138895249

Following gene: 138895252

Centisome position: 47.27

GC content: 40.76

Gene sequence:

>768_bases
ATGTGCCAAGTTCTCGGTGTTTCTAAAAGTGGGTATTATGCATGGCTGAAACGACCAAAAAGCAACCAAAAAGAGAAAAA
AGAACAACTGACCCAACAGATTCGAAATGAGTATCTCAAGTCACGCAAGATTTACGGTAGTCCGAAAATTACGCAAGAAC
TACGCAAACAAGGAATTGGTGTGTCCCAAAAGACAGTCGCTCGCATCATGAGTGAAGAAGGATTAAGATCCATTACGGTA
CGTAAATACAAGGCAACGACGAATAGTAATCATCCTTACAACGTGTATGTGAATCTGTTAGAACAGAACTTCCAAGCAAC
GGCTCCAAATGAAGTATGGATGGCCGATATCACGTACATTCCTACTGATGAAGGATGGTTGTATTTAGCGAGCATCATGG
ATTTATATACCCGTAAAATCGTAGGATGGTATATCGATAACCAAATGACGAAAGAGTTAGTCATTAAAGCCTTACAACGA
GCGTTAAACAACGAGAAACCAACAGGGAGAGTCCTCCATCACTCGGATCGTGGGAGCCAATATGCTTCAAATGACTATCA
GCAGCTCTTACAGGAACACCATTTTCAAGTGAGCATGTCGAGACGTGGGAACTGTTACCGGATTGACCCCCTAAATTTGG
ACACATCCTATCTTAATTTTAGGTTATTCTCAAAATTTCTCGTTTTTTCTTGGCAAGAAGACAAAATCCTCTTGCCTTAT
ACGCGAACTTCTTTGATGATTAACGATTCCGTTTGCGCTTTTTTGTAA

Upstream 100 bases:

>100_bases
AATTAGCGATCCTAAAAAAGGCGTTAGGCATCTTCACCAGAAACCAGAAGTGATTTACGCGTTCATTTTTCAACATCGAA
ATGAATTTCGCGTGGTGAAG

Downstream 100 bases:

>100_bases
AATTCATGCGGTGGAAGATCGAGAATACTCGAATGAATCCTTCGCTCGTTATAAAATTTCATGTACTCCATCACGGCTTG
ATAAGCTTCTTCATAGCTGT

Product: transposase

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MCQVLGVSKSGYYAWLKRPKSNQKEKKEQLTQQIRNEYLKSRKIYGSPKITQELRKQGIGVSQKTVARIMSEEGLRSITV
RKYKATTNSNHPYNVYVNLLEQNFQATAPNEVWMADITYIPTDEGWLYLASIMDLYTRKIVGWYIDNQMTKELVIKALQR
ALNNEKPTGRVLHHSDRGSQYASNDYQQLLQEHHFQVSMSRRGNCYRIDPLNLDTSYLNFRLFSKFLVFSWQEDKILLPY
TRTSLMINDSVCAFL

Sequences:

>Translated_255_residues
MCQVLGVSKSGYYAWLKRPKSNQKEKKEQLTQQIRNEYLKSRKIYGSPKITQELRKQGIGVSQKTVARIMSEEGLRSITV
RKYKATTNSNHPYNVYVNLLEQNFQATAPNEVWMADITYIPTDEGWLYLASIMDLYTRKIVGWYIDNQMTKELVIKALQR
ALNNEKPTGRVLHHSDRGSQYASNDYQQLLQEHHFQVSMSRRGNCYRIDPLNLDTSYLNFRLFSKFLVFSWQEDKILLPY
TRTSLMINDSVCAFL
>Mature_255_residues
MCQVLGVSKSGYYAWLKRPKSNQKEKKEQLTQQIRNEYLKSRKIYGSPKITQELRKQGIGVSQKTVARIMSEEGLRSITV
RKYKATTNSNHPYNVYVNLLEQNFQATAPNEVWMADITYIPTDEGWLYLASIMDLYTRKIVGWYIDNQMTKELVIKALQR
ALNNEKPTGRVLHHSDRGSQYASNDYQQLLQEHHFQVSMSRRGNCYRIDPLNLDTSYLNFRLFSKFLVFSWQEDKILLPY
TRTSLMINDSVCAFL

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=211, Percent_Identity=33.175355450237, Blast_Score=135, Evalue=2e-32,
Organism=Escherichia coli, GI1788405, Length=208, Percent_Identity=42.3076923076923, Blast_Score=183, Evalue=1e-47,
Organism=Escherichia coli, GI1787263, Length=208, Percent_Identity=42.3076923076923, Blast_Score=183, Evalue=1e-47,
Organism=Escherichia coli, GI1786753, Length=208, Percent_Identity=42.3076923076923, Blast_Score=183, Evalue=1e-47,
Organism=Escherichia coli, GI1786570, Length=208, Percent_Identity=42.3076923076923, Blast_Score=183, Evalue=1e-47,
Organism=Escherichia coli, GI1786490, Length=208, Percent_Identity=42.3076923076923, Blast_Score=183, Evalue=1e-47,
Organism=Escherichia coli, GI1789981, Length=203, Percent_Identity=30.0492610837438, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 29872; Mature: 29872

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQVLGVSKSGYYAWLKRPKSNQKEKKEQLTQQIRNEYLKSRKIYGSPKITQELRKQGIG
CCEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
VSQKTVARIMSEEGLRSITVRKYKATTNSNHPYNVYVNLLEQNFQATAPNEVWMADITYI
CCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEEHHCCCCCCCCCCEEEEEEEEE
PTDEGWLYLASIMDLYTRKIVGWYIDNQMTKELVIKALQRALNNEKPTGRVLHHSDRGSQ
ECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC
YASNDYQQLLQEHHFQVSMSRRGNCYRIDPLNLDTSYLNFRLFSKFLVFSWQEDKILLPY
CCCHHHHHHHHHHCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHEECCCCCEEEEE
TRTSLMINDSVCAFL
ECEEEEECCCHHHCC
>Mature Secondary Structure
MCQVLGVSKSGYYAWLKRPKSNQKEKKEQLTQQIRNEYLKSRKIYGSPKITQELRKQGIG
CCEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
VSQKTVARIMSEEGLRSITVRKYKATTNSNHPYNVYVNLLEQNFQATAPNEVWMADITYI
CCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEEHHCCCCCCCCCCEEEEEEEEE
PTDEGWLYLASIMDLYTRKIVGWYIDNQMTKELVIKALQRALNNEKPTGRVLHHSDRGSQ
ECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC
YASNDYQQLLQEHHFQVSMSRRGNCYRIDPLNLDTSYLNFRLFSKFLVFSWQEDKILLPY
CCCHHHHHHHHHHCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHEECCCCCEEEEE
TRTSLMINDSVCAFL
ECEEEEECCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]