Click here to switch to the map view.

The map label for this gene is 138894872

Identifier: 138894872

GI number: 138894872

Start: 1278601

End: 1279575

Strand: Reverse

Name: 138894872

Synonym: GTNG_1208

Alternate gene names: NA

Gene position: 1279575-1278601 (Counterclockwise)

Preceding gene: 138894875

Following gene: 138894869

Centisome position: 36.04

GC content: 53.13

Gene sequence:

>975_bases
TTGCTGGCAGTCGCGTTCGTCTGGGGGGCGACGTTCGTCGTCGTCCAAAATGCCATTTCCTTTTTAGAACCGCTGTCGTT
TAACGCCATCCGCTTCAGTTTTGCTGGCTTGTTCCTTTTCGCATGGATCGCCATCGTTTCCCGCCCGCTGCTCAGGCAGT
TATCGTGGCGGGTCATCGGTGCAGGTGCTTGGATGGGACTATGGTTGTTTGGCGGCTATGCGCTTCAAACGGTCGGGCTT
TTGTATACAACTTCATCGAAAGCGGGCTTTATTACCGGGCTGAGCGTTGTTCTCGTGCCGCTGTTTTCGTTTTTGATTTT
AAAGCAAAACCCGACCACGAATGCGGCCATCGGAGCGGTGCTTGCCGCCTTCGGTTTATATTGGCTGACAGGCGGAGCCG
AGTTGTCATTCAACCGCGGTGACGTATTCGTCTTTTTTTGCGCCATTTCCTTTGCCATGCACATTATCGTGACGGGTCAA
TATTCGTCGCGTTATTCAACATTGCTGTTAACGATGGTGCAAATTTTTACCGTCGCCATCCTTTGCTTCATCTTCGCCTT
TTGTCTTGAAGAGGCAACGAACATGTGGGATACGACGGTGCTCCGCCGTCCGGAAGTGTGGGGAGCGCTCACGATCACTT
CGCTACTGGCGACGACAGCCGCTTTTTTAATCCAAACAGGGGTGCAAAAATATACGACGCCAACTCGTGTAGCACTCATT
TTCGCTATGGAGCCGGTATTTGCTGCTTTGACCGCCTATCTTTGGGCTGGCGAACGGCTGTCGCCATCTGCTTGGCTCGG
CGGCATCGCCAATTTTGGCCGGCATGATCCTCTCCGAACTTCCAAGTGCGCGCTCATGGGGGAAACGGTGGCGGGAAAAG
CGGAATATCTCCTCGTAGCAGCAAAAGCTGTCCTGCGTGAACAGTGGGACAGCTTTTTTCGTCACGTTGGGCGTTTCGCT
GTCATGATCCTCTGA

Upstream 100 bases:

>100_bases
TTATGATACACTAGCGGCTAGCAGCGTACCCTTTGACTAGATGTGAACAGACAAACAAGGGGGAATTGAACTTAAGCAGC
AAACCGTCGCTGATCTTAGT

Downstream 100 bases:

>100_bases
AGCAAGCGCTCCATTCGCTTCACTCCCTACCCCTTCGTCTGCGGCGACACAGCCAATGCGAAACAGCACCAGTCATGATC
CCGAGGAACGCTCCACCAAC

Product: drug/metabolite exporter family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MLAVAFVWGATFVVVQNAISFLEPLSFNAIRFSFAGLFLFAWIAIVSRPLLRQLSWRVIGAGAWMGLWLFGGYALQTVGL
LYTTSSKAGFITGLSVVLVPLFSFLILKQNPTTNAAIGAVLAAFGLYWLTGGAELSFNRGDVFVFFCAISFAMHIIVTGQ
YSSRYSTLLLTMVQIFTVAILCFIFAFCLEEATNMWDTTVLRRPEVWGALTITSLLATTAAFLIQTGVQKYTTPTRVALI
FAMEPVFAALTAYLWAGERLSPSAWLGGIANFGRHDPLRTSKCALMGETVAGKAEYLLVAAKAVLREQWDSFFRHVGRFA
VMIL

Sequences:

>Translated_324_residues
MLAVAFVWGATFVVVQNAISFLEPLSFNAIRFSFAGLFLFAWIAIVSRPLLRQLSWRVIGAGAWMGLWLFGGYALQTVGL
LYTTSSKAGFITGLSVVLVPLFSFLILKQNPTTNAAIGAVLAAFGLYWLTGGAELSFNRGDVFVFFCAISFAMHIIVTGQ
YSSRYSTLLLTMVQIFTVAILCFIFAFCLEEATNMWDTTVLRRPEVWGALTITSLLATTAAFLIQTGVQKYTTPTRVALI
FAMEPVFAALTAYLWAGERLSPSAWLGGIANFGRHDPLRTSKCALMGETVAGKAEYLLVAAKAVLREQWDSFFRHVGRFA
VMIL
>Mature_324_residues
MLAVAFVWGATFVVVQNAISFLEPLSFNAIRFSFAGLFLFAWIAIVSRPLLRQLSWRVIGAGAWMGLWLFGGYALQTVGL
LYTTSSKAGFITGLSVVLVPLFSFLILKQNPTTNAAIGAVLAAFGLYWLTGGAELSFNRGDVFVFFCAISFAMHIIVTGQ
YSSRYSTLLLTMVQIFTVAILCFIFAFCLEEATNMWDTTVLRRPEVWGALTITSLLATTAAFLIQTGVQKYTTPTRVALI
FAMEPVFAALTAYLWAGERLSPSAWLGGIANFGRHDPLRTSKCALMGETVAGKAEYLLVAAKAVLREQWDSFFRHVGRFA
VMIL

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 35590; Mature: 35590

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAVAFVWGATFVVVQNAISFLEPLSFNAIRFSFAGLFLFAWIAIVSRPLLRQLSWRVIG
CEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
AGAWMGLWLFGGYALQTVGLLYTTSSKAGFITGLSVVLVPLFSFLILKQNPTTNAAIGAV
CHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LAAFGLYWLTGGAELSFNRGDVFVFFCAISFAMHIIVTGQYSSRYSTLLLTMVQIFTVAI
HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHH
LCFIFAFCLEEATNMWDTTVLRRPEVWGALTITSLLATTAAFLIQTGVQKYTTPTRVALI
HHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEHH
FAMEPVFAALTAYLWAGERLSPSAWLGGIANFGRHDPLRTSKCALMGETVAGKAEYLLVA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCHHCCCHHHHHHH
AKAVLREQWDSFFRHVGRFAVMIL
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLAVAFVWGATFVVVQNAISFLEPLSFNAIRFSFAGLFLFAWIAIVSRPLLRQLSWRVIG
CEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
AGAWMGLWLFGGYALQTVGLLYTTSSKAGFITGLSVVLVPLFSFLILKQNPTTNAAIGAV
CHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LAAFGLYWLTGGAELSFNRGDVFVFFCAISFAMHIIVTGQYSSRYSTLLLTMVQIFTVAI
HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHH
LCFIFAFCLEEATNMWDTTVLRRPEVWGALTITSLLATTAAFLIQTGVQKYTTPTRVALI
HHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEHH
FAMEPVFAALTAYLWAGERLSPSAWLGGIANFGRHDPLRTSKCALMGETVAGKAEYLLVA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCHHCCCHHHHHHH
AKAVLREQWDSFFRHVGRFAVMIL
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]