| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is 138894817
Identifier: 138894817
GI number: 138894817
Start: 1215436
End: 1216992
Strand: Direct
Name: 138894817
Synonym: GTNG_1151
Alternate gene names: NA
Gene position: 1215436-1216992 (Clockwise)
Preceding gene: 138894815
Following gene: 138894818
Centisome position: 34.23
GC content: 53.82
Gene sequence:
>1557_bases ATGGGTTCGATCATCATCTCCGCTTTGCTTGCCTTAGTCATTGGTGCCGTTGTTGGCTTTTTTGTTCGCAAATCGATTGC CGAAGCAAAAATCGGTGGGGCGAAAGCAGCTGCCGAGCAGCTGATTGAAGAGGCGAAACGCGCGGCGGACGCCTTGAAAA AAGAGGCGCTTCTCGAAGCGAAAGACGAGATTCATAAATTGCGTACGGAAGCGGAACACGATATCCGCGACCGGAGAAGC GAACTCCAAAAACAAGAAAACCGCTTGATGCAAAAGGAGGAAAACCTCGACCGCAAAGATGAGGCGCTCAATAAACGCGA GGCGCTGCTCGAAGCGAAAGAAGAAGCGTTAAATGAAAGACAACAGCATATTGAACAAATGGAAAGCAAAGTGGAAACGC TCATCAAACAGCAACAAACCGAACTCGAACGCATTTCCGGATTAACGCGCGACGATGCGCGCCACCTCATTTTAGAGCGC GTCGAAAAGGAACTGTCGCATGAGATTGCGATGATGGTCAAAGAAGCGGAAACGCGGGCGAAAGAGGAGGCAGACAAGCG AGCAAAGGCGATTTTGTCACTCGCCATCCAGCGCTGCGCCGCCGATCATGTCGCCGAAACGACTGTCTCTGTCGTGAACT TGCCAAACGATGAAATGAAAGGGCGGATCATCGGACGCGAAGGGCGGAACATCCGTACGCTCGAGACGCTCACCGGCATT GATTTAATTATTGACGATACACCGGAGGCGGTCATTTTGTCCGGATTTGACCCGATTCGTCGCGAAACAGCGCGCATTGC GCTAGATAAGCTCGTGCAGGACGGCCGAATCCATCCAGCGCGCATTGAAGAAATGGTCGGAAAGGCGCGCCGCGAAGTGG ATGAACACATCCGCGAAGTCGGTGAACAGACGACGTTTGAAGTCGGCGTCCACGGCTTGCATCCGGATTTGATTAAAATT TTAGGGCGGCTTAAGTTCCGGACGAGCTACGGGCAAAACGTCCTAAAACATTCGGTGGAAGTGGCGTTTTTAGCCGGGCT GATGGCGGCCGAGCTCGGGGAAGACGAAATGTTGGCGCGTCGGGCCGGCTTGCTTCATGACATCGGCAAGGCGATCGACC ATGAAGTGGAAGGAAGCCATGTGGAAATCGGCGTTGAGTTGGCGACGAAGTATAAAGAACATCCCGTTGTCATCAACAGC ATCGCCTCCCACCATGGCGATACCGAGCCGACATCAGTCATCGCCGTGCTCGTTGCGGCAGCGGACGCCCTGTCGGCGGC ACGGCCGGGGGCGCGCAGCGAAACGCTGGAAAACTATATCCGCCGCTTAGAGAAGCTCGAAGAAATTGCGGAATCGTACG AAGGGGTGGAAAAATCGTACGCCATCCAAGCTGGCCGCGAAGTGCGCATCATGGTCAAACCAGATATGATCGACGATTTG GAAGCGCATCGGTTGGCGCGCGATATCCGCAAGCGAATCGAAGAAGAGCTCGATTATCCGGGTCATATTAAAGTGACAGT CATCCGCGAAACGCGGGCGGTCGAATATGCGAAATAA
Upstream 100 bases:
>100_bases GTTTTGAAAACGGGAATGTCCACTTGCGCCGGACGATTGGGGGCAACAGTGGCGCGAAGAAAGAGCGAAAGTAAATTGAA CAGCAAGAGGAGGTGAAACG
Downstream 100 bases:
>100_bases AGTGGCAGCCTATTGCCACTTTATTTTTTGTCCGTAAAATAAGAGAGTATACCGATCGCCTGATGATCTTTACAGTGGCG ATACTTTTGATTTAGAAAGG
Product: phosphodiesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 518; Mature: 517
Protein sequence:
>518_residues MGSIIISALLALVIGAVVGFFVRKSIAEAKIGGAKAAAEQLIEEAKRAADALKKEALLEAKDEIHKLRTEAEHDIRDRRS ELQKQENRLMQKEENLDRKDEALNKREALLEAKEEALNERQQHIEQMESKVETLIKQQQTELERISGLTRDDARHLILER VEKELSHEIAMMVKEAETRAKEEADKRAKAILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTGI DLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVGKARREVDEHIREVGEQTTFEVGVHGLHPDLIKI LGRLKFRTSYGQNVLKHSVEVAFLAGLMAAELGEDEMLARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINS IASHHGDTEPTSVIAVLVAAADALSAARPGARSETLENYIRRLEKLEEIAESYEGVEKSYAIQAGREVRIMVKPDMIDDL EAHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
Sequences:
>Translated_518_residues MGSIIISALLALVIGAVVGFFVRKSIAEAKIGGAKAAAEQLIEEAKRAADALKKEALLEAKDEIHKLRTEAEHDIRDRRS ELQKQENRLMQKEENLDRKDEALNKREALLEAKEEALNERQQHIEQMESKVETLIKQQQTELERISGLTRDDARHLILER VEKELSHEIAMMVKEAETRAKEEADKRAKAILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTGI DLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVGKARREVDEHIREVGEQTTFEVGVHGLHPDLIKI LGRLKFRTSYGQNVLKHSVEVAFLAGLMAAELGEDEMLARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINS IASHHGDTEPTSVIAVLVAAADALSAARPGARSETLENYIRRLEKLEEIAESYEGVEKSYAIQAGREVRIMVKPDMIDDL EAHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK >Mature_517_residues GSIIISALLALVIGAVVGFFVRKSIAEAKIGGAKAAAEQLIEEAKRAADALKKEALLEAKDEIHKLRTEAEHDIRDRRSE LQKQENRLMQKEENLDRKDEALNKREALLEAKEEALNERQQHIEQMESKVETLIKQQQTELERISGLTRDDARHLILERV EKELSHEIAMMVKEAETRAKEEADKRAKAILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTGID LIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVGKARREVDEHIREVGEQTTFEVGVHGLHPDLIKIL GRLKFRTSYGQNVLKHSVEVAFLAGLMAAELGEDEMLARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSI ASHHGDTEPTSVIAVLVAAADALSAARPGARSETLENYIRRLEKLEEIAESYEGVEKSYAIQAGREVRIMVKPDMIDDLE AHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
Specific function: Catalyzes the hydrolysis of both 2',3'-cyclic AMP and 2',3'-cyclic GMP into 3'-AMP and 3'-GMP, respectively, at the 3'- terminal of RNA [H]
COG id: COG1418
COG function: function code R; Predicted HD superfamily hydrolase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017705 - InterPro: IPR022711 - InterPro: IPR004087 - InterPro: IPR004088 - InterPro: IPR018111 - InterPro: IPR003607 - InterPro: IPR006675 [H]
Pfam domain/function: PF12072 DUF3552; PF00013 KH_1 [H]
EC number: =3.1.4.16 [H]
Molecular weight: Translated: 58124; Mature: 57993
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS50084 KH_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSIIISALLALVIGAVVGFFVRKSIAEAKIGGAKAAAEQLIEEAKRAADALKKEALLEA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KDEIHKLRTEAEHDIRDRRSELQKQENRLMQKEENLDRKDEALNKREALLEAKEEALNER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QQHIEQMESKVETLIKQQQTELERISGLTRDDARHLILERVEKELSHEIAMMVKEAETRA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEEADKRAKAILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHCCCEECCCCCCCCHHHHHCCC DLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVGKARREVDEHIREV EEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH GEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSVEVAFLAGLMAAELGEDEMLAR CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH RAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSVIAVLVAA HHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHH ADALSAARPGARSETLENYIRRLEKLEEIAESYEGVEKSYAIQAGREVRIMVKPDMIDDL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHH EAHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK HHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHCCCC >Mature Secondary Structure GSIIISALLALVIGAVVGFFVRKSIAEAKIGGAKAAAEQLIEEAKRAADALKKEALLEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KDEIHKLRTEAEHDIRDRRSELQKQENRLMQKEENLDRKDEALNKREALLEAKEEALNER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QQHIEQMESKVETLIKQQQTELERISGLTRDDARHLILERVEKELSHEIAMMVKEAETRA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEEADKRAKAILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHCCCEECCCCCCCCHHHHHCCC DLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVGKARREVDEHIREV EEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH GEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSVEVAFLAGLMAAELGEDEMLAR CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH RAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSVIAVLVAA HHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHH ADALSAARPGARSETLENYIRRLEKLEEIAESYEGVEKSYAIQAGREVRIMVKPDMIDDL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHH EAHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK HHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA