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The map label for this gene is ymfF [H]

Identifier: 138894807

GI number: 138894807

Start: 1206271

End: 1207569

Strand: Direct

Name: ymfF [H]

Synonym: GTNG_1141

Alternate gene names: 138894807

Gene position: 1206271-1207569 (Clockwise)

Preceding gene: 138894806

Following gene: 138894808

Centisome position: 33.98

GC content: 52.27

Gene sequence:

>1299_bases
TTGGTCGATGAAAAAATAACAACGGTTGGGCCGGTTCGTGTCCATATGATTTCGACTAATAAGTATAAAACGAATACACT
TGTTTGGAAAATGAAAGCGCCGCTTGCCAAAGAAACGGTAACGCTGCGTGCGCTGCTTCCGTACGTTTTGCAAAGCGGCA
CGGCCGATTATCCGAGCGTCAAGGCGTTGCGCACCTACCTAGATGAGCTGTACGGAGCGACGTTGAACGTCGATTTAACA
AAAAAAGGCGAAGACCATATCATGACGATCCGCATTGATGTTGCGAATGAACGGTTTTTGCCAGAGCAAACGCCGCTCCT
GGAGAAAGCGCTTCAATTGCTCGCCGATCTCTTGTTCCGCCCAGCGCTTGAAGGCGGCCGGTTTGTTGAGGATATCGTCG
CTCGGGAAAAACAGGCGCTAAGCCAGCGTATTCAAGCGGTATATGATGATAAAATGCGCTATGCAAACATGCGCCTCGTG
CAAGAAATGTGCAAAGGTGAGCCGTACGCCCTCTCACCAAACGGCGAGCTCGAGGACATTGACGCCATCACAGCGGAACG
GCTGTATCGCTATTACGAGCAGTCGTTGGCTGAAGATGAGCTTGATTTGTATGTCATCGGCGACGTCGACGAAGAAGCAG
TGCTCGCTGCTGTCAAGCGTCGCTTCTCTTTGCCGGACCGTCCGCAGCCGTCGCGTGCGCCGCTCGCTTCGGCAAAAGCG
CGAGGAGAAATAAATGAAGTCATCGAGCGGCAAGACGTGAAGCAAGGAAAATTAAACATCGGCTACCGGACGAATGTGAC
GTACGAAGATGATGATTATTACGCCTTGCAGCTGTTTAACGGCATTTTCGGCGGCTTTTCTCATTCAAAGCTGTTTATCA
ACGTTCGCGAGAAGGCGAGCCTCGCCTACTATGCTGCATCCCGGCTTGAAAGCCATAAGGGGCTTTTGCTGGTCATGTCC
GGTATTGAGCCGGCCAATTATGAAAAGGCGCGCCGCATTATTGATGAACAAATGCAGGCGATGAAAAACGGCGATTTTAC
GGATGAAGAAATGGAACAAACGAAAGCGGTCATCCGCAATCAGCTGCTTGAGACGCTTGATACGCCGCGCGGGCTTGTCG
AGGTGCTGTACCATAACGTCGTCTCAACGCGGAAACGCCCGTTAAACGAATGGCTTGCCGGCACGGATGGTGTGACGCGC
GAGGATGTCGTGCGCGTCGCCGAAAAGGTGGCGCTCGATACGGTGTACTTTTTGACCGGAATGGAGGGGGCGACGGAAAA
TGGAAAAGCGGGTGTATGA

Upstream 100 bases:

>100_bases
GGATTTATTTGCATTTTCCGCTAGGCAACAGGTATATTGTTGATAAGACATCTCACAATAAAGATATCGCCCACTTTACG
AAGGAAAAGGAGGAGTTTGA

Downstream 100 bases:

>100_bases
AACGCTGCAAGAAACGTTGTTTTATGAAAAAATGGACAACGGTCTTGATGTCTACATTTTACCGAAAAAAGGGTTTCACA
AAACGTATGCGACGTTTACG

Product: Zinc protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MVDEKITTVGPVRVHMISTNKYKTNTLVWKMKAPLAKETVTLRALLPYVLQSGTADYPSVKALRTYLDELYGATLNVDLT
KKGEDHIMTIRIDVANERFLPEQTPLLEKALQLLADLLFRPALEGGRFVEDIVAREKQALSQRIQAVYDDKMRYANMRLV
QEMCKGEPYALSPNGELEDIDAITAERLYRYYEQSLAEDELDLYVIGDVDEEAVLAAVKRRFSLPDRPQPSRAPLASAKA
RGEINEVIERQDVKQGKLNIGYRTNVTYEDDDYYALQLFNGIFGGFSHSKLFINVREKASLAYYAASRLESHKGLLLVMS
GIEPANYEKARRIIDEQMQAMKNGDFTDEEMEQTKAVIRNQLLETLDTPRGLVEVLYHNVVSTRKRPLNEWLAGTDGVTR
EDVVRVAEKVALDTVYFLTGMEGATENGKAGV

Sequences:

>Translated_432_residues
MVDEKITTVGPVRVHMISTNKYKTNTLVWKMKAPLAKETVTLRALLPYVLQSGTADYPSVKALRTYLDELYGATLNVDLT
KKGEDHIMTIRIDVANERFLPEQTPLLEKALQLLADLLFRPALEGGRFVEDIVAREKQALSQRIQAVYDDKMRYANMRLV
QEMCKGEPYALSPNGELEDIDAITAERLYRYYEQSLAEDELDLYVIGDVDEEAVLAAVKRRFSLPDRPQPSRAPLASAKA
RGEINEVIERQDVKQGKLNIGYRTNVTYEDDDYYALQLFNGIFGGFSHSKLFINVREKASLAYYAASRLESHKGLLLVMS
GIEPANYEKARRIIDEQMQAMKNGDFTDEEMEQTKAVIRNQLLETLDTPRGLVEVLYHNVVSTRKRPLNEWLAGTDGVTR
EDVVRVAEKVALDTVYFLTGMEGATENGKAGV
>Mature_432_residues
MVDEKITTVGPVRVHMISTNKYKTNTLVWKMKAPLAKETVTLRALLPYVLQSGTADYPSVKALRTYLDELYGATLNVDLT
KKGEDHIMTIRIDVANERFLPEQTPLLEKALQLLADLLFRPALEGGRFVEDIVAREKQALSQRIQAVYDDKMRYANMRLV
QEMCKGEPYALSPNGELEDIDAITAERLYRYYEQSLAEDELDLYVIGDVDEEAVLAAVKRRFSLPDRPQPSRAPLASAKA
RGEINEVIERQDVKQGKLNIGYRTNVTYEDDDYYALQLFNGIFGGFSHSKLFINVREKASLAYYAASRLESHKGLLLVMS
GIEPANYEKARRIIDEQMQAMKNGDFTDEEMEQTKAVIRNQLLETLDTPRGLVEVLYHNVVSTRKRPLNEWLAGTDGVTR
EDVVRVAEKVALDTVYFLTGMEGATENGKAGV

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 48857; Mature: 48857

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDEKITTVGPVRVHMISTNKYKTNTLVWKMKAPLAKETVTLRALLPYVLQSGTADYPSV
CCCCCCCCCCCEEEEEEECCCEECCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHH
KALRTYLDELYGATLNVDLTKKGEDHIMTIRIDVANERFLPEQTPLLEKALQLLADLLFR
HHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
PALEGGRFVEDIVAREKQALSQRIQAVYDDKMRYANMRLVQEMCKGEPYALSPNGELEDI
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHH
DAITAERLYRYYEQSLAEDELDLYVIGDVDEEAVLAAVKRRFSLPDRPQPSRAPLASAKA
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
RGEINEVIERQDVKQGKLNIGYRTNVTYEDDDYYALQLFNGIFGGFSHSKLFINVREKAS
CCHHHHHHHHHHHHCCCEECCEEECCEECCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHH
LAYYAASRLESHKGLLLVMSGIEPANYEKARRIIDEQMQAMKNGDFTDEEMEQTKAVIRN
HHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
QLLETLDTPRGLVEVLYHNVVSTRKRPLNEWLAGTDGVTREDVVRVAEKVALDTVYFLTG
HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC
MEGATENGKAGV
CCCCCCCCCCCC
>Mature Secondary Structure
MVDEKITTVGPVRVHMISTNKYKTNTLVWKMKAPLAKETVTLRALLPYVLQSGTADYPSV
CCCCCCCCCCCEEEEEEECCCEECCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHH
KALRTYLDELYGATLNVDLTKKGEDHIMTIRIDVANERFLPEQTPLLEKALQLLADLLFR
HHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
PALEGGRFVEDIVAREKQALSQRIQAVYDDKMRYANMRLVQEMCKGEPYALSPNGELEDI
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHH
DAITAERLYRYYEQSLAEDELDLYVIGDVDEEAVLAAVKRRFSLPDRPQPSRAPLASAKA
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
RGEINEVIERQDVKQGKLNIGYRTNVTYEDDDYYALQLFNGIFGGFSHSKLFINVREKAS
CCHHHHHHHHHHHHCCCEECCEEECCEECCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHH
LAYYAASRLESHKGLLLVMSGIEPANYEKARRIIDEQMQAMKNGDFTDEEMEQTKAVIRN
HHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
QLLETLDTPRGLVEVLYHNVVSTRKRPLNEWLAGTDGVTREDVVRVAEKVALDTVYFLTG
HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC
MEGATENGKAGV
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]