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The map label for this gene is rimP [H]

Identifier: 138894779

GI number: 138894779

Start: 1177297

End: 1177809

Strand: Direct

Name: rimP [H]

Synonym: GTNG_1113

Alternate gene names: 138894779

Gene position: 1177297-1177809 (Clockwise)

Preceding gene: 138894778

Following gene: 138894780

Centisome position: 33.16

GC content: 45.03

Gene sequence:

>513_bases
ATGCCACACGCCCATGTTTGCTCGATAAGGAGGAAAACGATGAGCAAAAAAGTGACAGAAACGGTCGAACAGCTTGTCAC
GCCCATTTTAAACGAGATGGGATTAGAATTAGTAGACATTGAATATGTGAAAGAGGGAAAAAACTGGTTTTTGCGTGTTT
TTATTGATTCAGACGATGGGGTCGATATTGAACAATGCGGCGTCGTCAGTGAAAAGTTGAGCGAAAAGCTGGATGAGGTT
GATCCGATTCCGCACAACTACTTTTTGGAAGTCTCGTCGCCAGGGGCAGAGCGACCGTTAAAAAATGAAAAAGACTTTGT
CAAAGCCATTGGAAAACATGTATATATCAAGACGTATGAACCCATTGCAGGAGAAAAGCAGTTTGAAGGTGAGTTAACCG
CTTTCGATGGAACGACCGTCACGCTGTCGGTCAAAGACCGCGGGCGGCAAAAAACAGTCGCCATTCCGTATGAAAAAGTG
GCGAGCGCAAGACTAGCCGTCATCTTCTTCTAA

Upstream 100 bases:

>100_bases
AAGATAATGACAAGCAAAGAGTGGGGAAACCCACTCTTTCGTCTTGAATTGGCATCTGTCTTTCGTTCATTCCCCGCCCT
GTGCAGGGGATTTTCTCATT

Downstream 100 bases:

>100_bases
TAATAAAAGGGGGATTTTCGTTTCATGAACACGCAGTTGCTTGAGGCGTTAGCCGATCTGATGCGGGAAAAGGGCATCAG
CAAAGAAGTCATCATGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MPHAHVCSIRRKTMSKKVTETVEQLVTPILNEMGLELVDIEYVKEGKNWFLRVFIDSDDGVDIEQCGVVSEKLSEKLDEV
DPIPHNYFLEVSSPGAERPLKNEKDFVKAIGKHVYIKTYEPIAGEKQFEGELTAFDGTTVTLSVKDRGRQKTVAIPYEKV
ASARLAVIFF

Sequences:

>Translated_170_residues
MPHAHVCSIRRKTMSKKVTETVEQLVTPILNEMGLELVDIEYVKEGKNWFLRVFIDSDDGVDIEQCGVVSEKLSEKLDEV
DPIPHNYFLEVSSPGAERPLKNEKDFVKAIGKHVYIKTYEPIAGEKQFEGELTAFDGTTVTLSVKDRGRQKTVAIPYEKV
ASARLAVIFF
>Mature_169_residues
PHAHVCSIRRKTMSKKVTETVEQLVTPILNEMGLELVDIEYVKEGKNWFLRVFIDSDDGVDIEQCGVVSEKLSEKLDEVD
PIPHNYFLEVSSPGAERPLKNEKDFVKAIGKHVYIKTYEPIAGEKQFEGELTAFDGTTVTLSVKDRGRQKTVAIPYEKVA
SARLAVIFF

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=136, Percent_Identity=34.5588235294118, Blast_Score=94, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 19202; Mature: 19071

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHAHVCSIRRKTMSKKVTETVEQLVTPILNEMGLELVDIEYVKEGKNWFLRVFIDSDDG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCEEEEEEEECCCC
VDIEQCGVVSEKLSEKLDEVDPIPHNYFLEVSSPGAERPLKNEKDFVKAIGKHVYIKTYE
CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCEEEEEECC
PIAGEKQFEGELTAFDGTTVTLSVKDRGRQKTVAIPYEKVASARLAVIFF
CCCCCCCCCCEEEEECCCEEEEEECCCCCCCEEECCHHHHCCCEEEEEEC
>Mature Secondary Structure 
PHAHVCSIRRKTMSKKVTETVEQLVTPILNEMGLELVDIEYVKEGKNWFLRVFIDSDDG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCEEEEEEEECCCC
VDIEQCGVVSEKLSEKLDEVDPIPHNYFLEVSSPGAERPLKNEKDFVKAIGKHVYIKTYE
CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCEEEEEECC
PIAGEKQFEGELTAFDGTTVTLSVKDRGRQKTVAIPYEKVASARLAVIFF
CCCCCCCCCCEEEEECCCEEEEEECCCCCCCEEECCHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA