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The map label for this gene is fliF [H]

Identifier: 138894740

GI number: 138894740

Start: 1137973

End: 1139556

Strand: Direct

Name: fliF [H]

Synonym: GTNG_1072

Alternate gene names: 138894740

Gene position: 1137973-1139556 (Clockwise)

Preceding gene: 138894739

Following gene: 138894741

Centisome position: 32.05

GC content: 50.32

Gene sequence:

>1584_bases
ATGAACAGCAAATGGAAAGAGTGGTGGGGCCGCGCTCGTTCGTTTTGGCAAGAGCGGACGAAAAAACAGAAATGGCTCGC
TATAGGCGGGATAGCGGTGGTTCTTTTTTCCATCGGCATCGGAGTGTTTTTCGCCACGAGGACGGAAATGGTGCCGCTAT
ACAGTAATTTAACACCGCAAGAAGCTGGGCAAATTAAAGCGACGCTTGATGGACGCGGTGTTTCGGCAGAAGTGGCCGAT
GGCGGCACAACGATCAAAGTGCCGAAAGAGCAAGTCGATGCGCTGAAAGTGGAGCTAGCCGCCGAAGGCATTCCGAACAG
CGGAGTCATCGATTATTCGTTTTTTGGCCAAAACGCGAGCTTCGGCATGACTGATAATGAGTTTAATATGGTAAAGCTGA
AGGCGATGCAAACTGAACTCGCCAATTTAATGAAAACGATCGACGGCGTCGAGGATGCGAAAGTGATGATCAACCTTCCG
CAGCCGAGCGTATTTGTTTCTGATGAAAAAGGGGAAGCCTCGGCTTCGATTGTGCTGAGAACGAAGCCAGGCTACCAGTT
TAGCGACGAGCAAATTCGGGCGTTGTATCACCTCGTCGCCAAAAGTGTTCCCAACCTCTCTACAGATAATATCGTCATTA
TGAATCAGTTTTTTGAGTATTTTGACTTAAAAAATGATAGTGGAAATTCGACAAGGGCGACATTTGCTTCGCAGCAACAA
ATCAAAAAACAAATCGAACGCGATATCCAGCGTCAAGTGCAGCAAATGCTCGGCACGATGATGGGGCAGGACAAAGTCGT
CGTTTCCGTCACGGCTGATGTCGACTTTACGCAAGAAAAACGGGAAGAAAATTTAGTCGCTCCTGTTGGTGAAGAGAACG
ACGAAGGAATCGCCGTCAGCGTCCAACGCATTAAAGAAACGTATGCGGGAAGCGGAGCGCCGCCGGGCGGCACTGCCGGG
ACAGGCACGAACGAAACGCCGGGCTACCAAGGAGCAAGCGGCGCAACGAACGGCAATTACGAGCGGACCGAAGAAACCAT
CAACAATGAAGTCAATAAAATAAAAAAACAAATTGTGGAAAGTCCGTATAAAATTCGTGACTTAGGCATTCAGGTGATGG
TTGAGCCGCCCGACCCAGACGACCCGAACTCACTGACACCGGAGGCGGTCAATGATATTCAAAAAATATTAGGAACGATT
GTCCGAACATCGATTGACAAAGGTGAAGCACAAACATTGACTGATGAAGACATTAACAGCCGCATTGTCGTCTCGGTACA
AAAGTTTAACGGTAAGCCGACATTCACGGAACCGGATCCGGTTCGGCCGGCATGGTGGTGGTATGCGGCTGGCGCAGGAG
CGTTATTGTTGATCGCTCTGCTGTTATTCTTCTGGCTGCGTCGCCGCGAAGACGAAGAAGAGGACGAAGAATTCGTATTC
GCTCCGCCGCTTCCGGCAGAGCCGGAATTGCCAGAGCCGCCGGAGACGGAGGAGAGAATGCGCCGCCGTCAGCTTGAACG
GCTGGCGAAAGAAAAGCCGGATGAGTTTGCCAAACTATTGAAAACGTGGCTATCAGAAGAGTAG

Upstream 100 bases:

>100_bases
TGTAGTATTTATAAGCTGCAATACATTACATATAGAGGCTGTCGTCATTGCCGGGCGATGGCAGCAAATGGTTGTATGGC
TGGATGATCGGGGGAATTGT

Downstream 100 bases:

>100_bases
GAGGAACGACGTATGGCAAAGCGCGAACGGAAAGGCGGGCTGTCGGGCAGACAAAAAGCGGCCATCCTGCTCATTTCCCT
CGGCCCAGACGTGTCGGCCT

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MNSKWKEWWGRARSFWQERTKKQKWLAIGGIAVVLFSIGIGVFFATRTEMVPLYSNLTPQEAGQIKATLDGRGVSAEVAD
GGTTIKVPKEQVDALKVELAAEGIPNSGVIDYSFFGQNASFGMTDNEFNMVKLKAMQTELANLMKTIDGVEDAKVMINLP
QPSVFVSDEKGEASASIVLRTKPGYQFSDEQIRALYHLVAKSVPNLSTDNIVIMNQFFEYFDLKNDSGNSTRATFASQQQ
IKKQIERDIQRQVQQMLGTMMGQDKVVVSVTADVDFTQEKREENLVAPVGEENDEGIAVSVQRIKETYAGSGAPPGGTAG
TGTNETPGYQGASGATNGNYERTEETINNEVNKIKKQIVESPYKIRDLGIQVMVEPPDPDDPNSLTPEAVNDIQKILGTI
VRTSIDKGEAQTLTDEDINSRIVVSVQKFNGKPTFTEPDPVRPAWWWYAAGAGALLLIALLLFFWLRRREDEEEDEEFVF
APPLPAEPELPEPPETEERMRRRQLERLAKEKPDEFAKLLKTWLSEE

Sequences:

>Translated_527_residues
MNSKWKEWWGRARSFWQERTKKQKWLAIGGIAVVLFSIGIGVFFATRTEMVPLYSNLTPQEAGQIKATLDGRGVSAEVAD
GGTTIKVPKEQVDALKVELAAEGIPNSGVIDYSFFGQNASFGMTDNEFNMVKLKAMQTELANLMKTIDGVEDAKVMINLP
QPSVFVSDEKGEASASIVLRTKPGYQFSDEQIRALYHLVAKSVPNLSTDNIVIMNQFFEYFDLKNDSGNSTRATFASQQQ
IKKQIERDIQRQVQQMLGTMMGQDKVVVSVTADVDFTQEKREENLVAPVGEENDEGIAVSVQRIKETYAGSGAPPGGTAG
TGTNETPGYQGASGATNGNYERTEETINNEVNKIKKQIVESPYKIRDLGIQVMVEPPDPDDPNSLTPEAVNDIQKILGTI
VRTSIDKGEAQTLTDEDINSRIVVSVQKFNGKPTFTEPDPVRPAWWWYAAGAGALLLIALLLFFWLRRREDEEEDEEFVF
APPLPAEPELPEPPETEERMRRRQLERLAKEKPDEFAKLLKTWLSEE
>Mature_527_residues
MNSKWKEWWGRARSFWQERTKKQKWLAIGGIAVVLFSIGIGVFFATRTEMVPLYSNLTPQEAGQIKATLDGRGVSAEVAD
GGTTIKVPKEQVDALKVELAAEGIPNSGVIDYSFFGQNASFGMTDNEFNMVKLKAMQTELANLMKTIDGVEDAKVMINLP
QPSVFVSDEKGEASASIVLRTKPGYQFSDEQIRALYHLVAKSVPNLSTDNIVIMNQFFEYFDLKNDSGNSTRATFASQQQ
IKKQIERDIQRQVQQMLGTMMGQDKVVVSVTADVDFTQEKREENLVAPVGEENDEGIAVSVQRIKETYAGSGAPPGGTAG
TGTNETPGYQGASGATNGNYERTEETINNEVNKIKKQIVESPYKIRDLGIQVMVEPPDPDDPNSLTPEAVNDIQKILGTI
VRTSIDKGEAQTLTDEDINSRIVVSVQKFNGKPTFTEPDPVRPAWWWYAAGAGALLLIALLLFFWLRRREDEEEDEEFVF
APPLPAEPELPEPPETEERMRRRQLERLAKEKPDEFAKLLKTWLSEE

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=438, Percent_Identity=25.5707762557078, Blast_Score=133, Evalue=3e-32,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 58765; Mature: 58765

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKWKEWWGRARSFWQERTKKQKWLAIGGIAVVLFSIGIGVFFATRTEMVPLYSNLTPQ
CCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EAGQIKATLDGRGVSAEVADGGTTIKVPKEQVDALKVELAAEGIPNSGVIDYSFFGQNAS
HCCCEEEEECCCCCEEEECCCCCEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
FGMTDNEFNMVKLKAMQTELANLMKTIDGVEDAKVMINLPQPSVFVSDEKGEASASIVLR
CCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCCCEEEEEE
TKPGYQFSDEQIRALYHLVAKSVPNLSTDNIVIMNQFFEYFDLKNDSGNSTRATFASQQQ
ECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCCCCCCCCCHHHHHHHHHH
IKKQIERDIQRQVQQMLGTMMGQDKVVVSVTADVDFTQEKREENLVAPVGEENDEGIAVS
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCEEE
VQRIKETYAGSGAPPGGTAGTGTNETPGYQGASGATNGNYERTEETINNEVNKIKKQIVE
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
SPYKIRDLGIQVMVEPPDPDDPNSLTPEAVNDIQKILGTIVRTSIDKGEAQTLTDEDINS
CCCEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
RIVVSVQKFNGKPTFTEPDPVRPAWWWYAAGAGALLLIALLLFFWLRRREDEEEDEEFVF
EEEEEEEECCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
APPLPAEPELPEPPETEERMRRRQLERLAKEKPDEFAKLLKTWLSEE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSKWKEWWGRARSFWQERTKKQKWLAIGGIAVVLFSIGIGVFFATRTEMVPLYSNLTPQ
CCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EAGQIKATLDGRGVSAEVADGGTTIKVPKEQVDALKVELAAEGIPNSGVIDYSFFGQNAS
HCCCEEEEECCCCCEEEECCCCCEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
FGMTDNEFNMVKLKAMQTELANLMKTIDGVEDAKVMINLPQPSVFVSDEKGEASASIVLR
CCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCCCEEEEEE
TKPGYQFSDEQIRALYHLVAKSVPNLSTDNIVIMNQFFEYFDLKNDSGNSTRATFASQQQ
ECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCCCCCCCCCHHHHHHHHHH
IKKQIERDIQRQVQQMLGTMMGQDKVVVSVTADVDFTQEKREENLVAPVGEENDEGIAVS
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCEEE
VQRIKETYAGSGAPPGGTAGTGTNETPGYQGASGATNGNYERTEETINNEVNKIKKQIVE
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
SPYKIRDLGIQVMVEPPDPDDPNSLTPEAVNDIQKILGTIVRTSIDKGEAQTLTDEDINS
CCCEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
RIVVSVQKFNGKPTFTEPDPVRPAWWWYAAGAGALLLIALLLFFWLRRREDEEEDEEFVF
EEEEEEEECCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
APPLPAEPELPEPPETEERMRRRQLERLAKEKPDEFAKLLKTWLSEE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1905667; 9384377; 1828465 [H]