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The map label for this gene is hslV [H]

Identifier: 138894734

GI number: 138894734

Start: 1133761

End: 1134303

Strand: Direct

Name: hslV [H]

Synonym: GTNG_1066

Alternate gene names: 138894734

Gene position: 1133761-1134303 (Clockwise)

Preceding gene: 138894733

Following gene: 138894735

Centisome position: 31.93

GC content: 55.25

Gene sequence:

>543_bases
ATGGACGGTTTTCATGCGACGACGATTTTCGCCATCCGTCATAATGGGGCGGCAGCGATGGCAGGCGATGGCCAAGTGAC
ATTCGGTAACGCAGTCGTCATGAAACATACCGCGAAGAAAGTGCGACGCCTGTTTCATGGCAAAGTGCTCGCCGGTTTTG
CCGGCTCGGTCGCCGATGCGTTTACGCTGTTTGAGATGTTTGAAGGCAAGCTCGAACAATTCAACGGCAATTTGCCGCGT
GCGGCCGTCGAGCTAGCGAAAGAGTGGCGGAGCAACAAAGTGTTGCGCCGCCTCGAGGCGATGTTGATTGTCATGGACGG
GCAGCATTTATTGCTGGTTTCCGGTACTGGTGAAGTCATTGAGCCGGATGACGGCATGCTCGCCATCGGTTCAGGCGGCC
ATTATGCGCTCGCCGCTGGACGCGCCTTAAAGCAGTATGCCGGCGCCTCGATGACCGCCAAAGAGATTGCGAAAGCCGCG
TTGGAGATTGCCGCTGACATTTGTGTCTATACGAACGGCCATATTATTGTCGAAGAGTTGTAA

Upstream 100 bases:

>100_bases
ATCAACGCAAGTGTATACCCATGTGACGAAAGATCGGCTGCGGTGTATTTATTTGCAGGCGCATCCGCGTGCATAGCCTG
CGGGCAAGGAGGGAAGAACC

Downstream 100 bases:

>100_bases
AAAAGGAGGAGGCCGAAGATGGCGGAAACACTGACTCCACGGCAAATTGTCGAGAGGCTCGATCAGTTTATTATCGGGCA
AAAAGAGGCGAAAAAGGCGG

Product: ATP-dependent protease peptidase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MDGFHATTIFAIRHNGAAAMAGDGQVTFGNAVVMKHTAKKVRRLFHGKVLAGFAGSVADAFTLFEMFEGKLEQFNGNLPR
AAVELAKEWRSNKVLRRLEAMLIVMDGQHLLLVSGTGEVIEPDDGMLAIGSGGHYALAAGRALKQYAGASMTAKEIAKAA
LEIAADICVYTNGHIIVEEL

Sequences:

>Translated_180_residues
MDGFHATTIFAIRHNGAAAMAGDGQVTFGNAVVMKHTAKKVRRLFHGKVLAGFAGSVADAFTLFEMFEGKLEQFNGNLPR
AAVELAKEWRSNKVLRRLEAMLIVMDGQHLLLVSGTGEVIEPDDGMLAIGSGGHYALAAGRALKQYAGASMTAKEIAKAA
LEIAADICVYTNGHIIVEEL
>Mature_180_residues
MDGFHATTIFAIRHNGAAAMAGDGQVTFGNAVVMKHTAKKVRRLFHGKVLAGFAGSVADAFTLFEMFEGKLEQFNGNLPR
AAVELAKEWRSNKVLRRLEAMLIVMDGQHLLLVSGTGEVIEPDDGMLAIGSGGHYALAAGRALKQYAGASMTAKEIAKAA
LEIAADICVYTNGHIIVEEL

Specific function: Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery [H]

COG id: COG5405

COG function: function code O; ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase T1B family. HslV subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790367, Length=174, Percent_Identity=55.7471264367816, Blast_Score=194, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022281
- InterPro:   IPR001353 [H]

Pfam domain/function: PF00227 Proteasome [H]

EC number: 3.4.25.- [C]

Molecular weight: Translated: 19199; Mature: 19199

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGFHATTIFAIRHNGAAAMAGDGQVTFGNAVVMKHTAKKVRRLFHGKVLAGFAGSVADA
CCCCEEEEEEEEEECCCEEEECCCEEEECCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHH
FTLFEMFEGKLEQFNGNLPRAAVELAKEWRSNKVLRRLEAMLIVMDGQHLLLVSGTGEVI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCCCEE
EPDDGMLAIGSGGHYALAAGRALKQYAGASMTAKEIAKAALEIAADICVYTNGHIIVEEL
CCCCCEEEEECCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEECCEEEEEEC
>Mature Secondary Structure
MDGFHATTIFAIRHNGAAAMAGDGQVTFGNAVVMKHTAKKVRRLFHGKVLAGFAGSVADA
CCCCEEEEEEEEEECCCEEEECCCEEEECCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHH
FTLFEMFEGKLEQFNGNLPRAAVELAKEWRSNKVLRRLEAMLIVMDGQHLLLVSGTGEVI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCCCEE
EPDDGMLAIGSGGHYALAAGRALKQYAGASMTAKEIAKAALEIAADICVYTNGHIIVEEL
CCCCCEEEEECCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA