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The map label for this gene is ydbT [H]

Identifier: 138894446

GI number: 138894446

Start: 848495

End: 849982

Strand: Reverse

Name: ydbT [H]

Synonym: GTNG_0774

Alternate gene names: 138894446

Gene position: 849982-848495 (Counterclockwise)

Preceding gene: 138894447

Following gene: 138894445

Centisome position: 23.94

GC content: 39.72

Gene sequence:

>1488_bases
ATGACGTTTCGCTATTCCAAGCTAAAACTATTCTATGACATGCTAGACCTTATCAAAAACAATCTGTTTATACTGTTCAT
TTTATTCCTAAATGCAGGTAGTAACTCTATGTTCATGAATATTGTGCAATGGGGTGCGATTGCGGTTTTCGGATTCAGTT
TCCTGTTTCGCATCTATGAGACATTATTTACTAAAGTGGTATTTGCTGAAGATGGCATTCATATACATAAGGGCCTATTT
TCTAAATCAGAGCAATTTATACCGCGCGAAAAATTTGAGAATGTGCAAACGCAGGCAAATGTTTTGCAACGATTATTTGG
CGTACAATCGATCACAATGGAAACAGGTGAAGCGACTAGCGATGTGACATTGAAATTTGTAAGCAAAGCAGATTGCATCA
AGATAGAGGATTATGTTTTACGAAATGGGAATCAAGAGAAACAGGTTGGGGAAGCCATCCATGGATCTGAACGTCAAGTT
CTTTTTACTACTACCATTCGTGATATTTTGAAAGCGTCCCTTTTGTCTTTCAGTTTTTTAGCCATCATTCCTATTGGCTT
AAATATATGGTCAGATGTACATCCAGAGAAATACATTAATGTAGATACGGTGATGTCTCATCTTTCAGGATGGCTGCTCA
TCTTGCTCGTCTTACTTGCCGTATTCGCAGCTGTCGGTATCGGCGTCTTTAAAACGTTTAATAGCTACTATCAATATACC
ATTTCAATGGACAATGAACGCATTTATGTACAAAAAGGCTGGCTTTCTAAACAAAGCTTTTCCATTCGTAAAGACAAAGT
ACAAGCGGTCATTTACAAACAAAACGGCTATCAAAAGTTGCTCGGTGTGACAACCATTAAGCTGATTTCAGCAGGGGAAA
TTTTGCCGAGTGAGGACCAAAACCTTAATGAATTTTTCCCGTACTTACCGACGGAAAAAGCACATGAATTAATAGCCATC
ATGCTGCCAGAATTTCAACTGCGTAGTATGACACATTATGCATCCCCTAAAGCAAAAAAGTTGATTTGGCTTCGGCCGCC
TATTTTTGCAAGCCTCGTTGCTGCCATTGGATTTTGGAAACCACTTTTCTTTATTCTTGGTGCGATTGTGTTGGTGTTTA
CTTATATCAACCGCATTCGAGAATACCGTCATACAGCGTTTCGGTTAGAAGATACACATGTGCAGCTTCGCTCAGGTGCC
TTTACAGTAGAAACACTCGTAACGAAACGCGCAAAGTTGCTTGAATTGCAATTTGAGCGTTCTTTGCTACAGCGAATGTT
TGGTGTCATGAGTGTAAAACTGACCAATCGTGCACACCCGGTTCACGTAACAACGTTATTAGATATCGATTCTTCTCTAC
AGCCGTTGATCACCTCTTGGTTTGAAGCGCGCACAAAAGATGTGGAGATTGATCCACATTCACAGTACAGTTCTTTAAAG
CAAGAGGCTTGTCCGATTCCTTCTTACGTTGAAGTGAATAGCAAATAA

Upstream 100 bases:

>100_bases
TGCAAGGCGGCGTTACCATTCCACATATTGAGGAAGAAGTTGCCATAAAGCTCCGCGATGATATTTCGAAGCTTGCCCGT
TTAAAGGAGCTTGATGAAAG

Downstream 100 bases:

>100_bases
ATCACCTACCAGCAGCATATGAAATGATGCTGCTTTATTTTTTCAAAAACATCATGATAGTTAACCATTTATATCTTAAT
TGAAAAGGAAGCATCCAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 494

Protein sequence:

>495_residues
MTFRYSKLKLFYDMLDLIKNNLFILFILFLNAGSNSMFMNIVQWGAIAVFGFSFLFRIYETLFTKVVFAEDGIHIHKGLF
SKSEQFIPREKFENVQTQANVLQRLFGVQSITMETGEATSDVTLKFVSKADCIKIEDYVLRNGNQEKQVGEAIHGSERQV
LFTTTIRDILKASLLSFSFLAIIPIGLNIWSDVHPEKYINVDTVMSHLSGWLLILLVLLAVFAAVGIGVFKTFNSYYQYT
ISMDNERIYVQKGWLSKQSFSIRKDKVQAVIYKQNGYQKLLGVTTIKLISAGEILPSEDQNLNEFFPYLPTEKAHELIAI
MLPEFQLRSMTHYASPKAKKLIWLRPPIFASLVAAIGFWKPLFFILGAIVLVFTYINRIREYRHTAFRLEDTHVQLRSGA
FTVETLVTKRAKLLELQFERSLLQRMFGVMSVKLTNRAHPVHVTTLLDIDSSLQPLITSWFEARTKDVEIDPHSQYSSLK
QEACPIPSYVEVNSK

Sequences:

>Translated_495_residues
MTFRYSKLKLFYDMLDLIKNNLFILFILFLNAGSNSMFMNIVQWGAIAVFGFSFLFRIYETLFTKVVFAEDGIHIHKGLF
SKSEQFIPREKFENVQTQANVLQRLFGVQSITMETGEATSDVTLKFVSKADCIKIEDYVLRNGNQEKQVGEAIHGSERQV
LFTTTIRDILKASLLSFSFLAIIPIGLNIWSDVHPEKYINVDTVMSHLSGWLLILLVLLAVFAAVGIGVFKTFNSYYQYT
ISMDNERIYVQKGWLSKQSFSIRKDKVQAVIYKQNGYQKLLGVTTIKLISAGEILPSEDQNLNEFFPYLPTEKAHELIAI
MLPEFQLRSMTHYASPKAKKLIWLRPPIFASLVAAIGFWKPLFFILGAIVLVFTYINRIREYRHTAFRLEDTHVQLRSGA
FTVETLVTKRAKLLELQFERSLLQRMFGVMSVKLTNRAHPVHVTTLLDIDSSLQPLITSWFEARTKDVEIDPHSQYSSLK
QEACPIPSYVEVNSK
>Mature_494_residues
TFRYSKLKLFYDMLDLIKNNLFILFILFLNAGSNSMFMNIVQWGAIAVFGFSFLFRIYETLFTKVVFAEDGIHIHKGLFS
KSEQFIPREKFENVQTQANVLQRLFGVQSITMETGEATSDVTLKFVSKADCIKIEDYVLRNGNQEKQVGEAIHGSERQVL
FTTTIRDILKASLLSFSFLAIIPIGLNIWSDVHPEKYINVDTVMSHLSGWLLILLVLLAVFAAVGIGVFKTFNSYYQYTI
SMDNERIYVQKGWLSKQSFSIRKDKVQAVIYKQNGYQKLLGVTTIKLISAGEILPSEDQNLNEFFPYLPTEKAHELIAIM
LPEFQLRSMTHYASPKAKKLIWLRPPIFASLVAAIGFWKPLFFILGAIVLVFTYINRIREYRHTAFRLEDTHVQLRSGAF
TVETLVTKRAKLLELQFERSLLQRMFGVMSVKLTNRAHPVHVTTLLDIDSSLQPLITSWFEARTKDVEIDPHSQYSSLKQ
EACPIPSYVEVNSK

Specific function: Unknown

COG id: COG3428

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182
- InterPro:   IPR014529 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 56814; Mature: 56683

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFRYSKLKLFYDMLDLIKNNLFILFILFLNAGSNSMFMNIVQWGAIAVFGFSFLFRIYE
CCCCHHHHHHHHHHHHHHHCCHHEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TLFTKVVFAEDGIHIHKGLFSKSEQFIPREKFENVQTQANVLQRLFGVQSITMETGEATS
HHHHHHHHCCCCCEEHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCC
DVTLKFVSKADCIKIEDYVLRNGNQEKQVGEAIHGSERQVLFTTTIRDILKASLLSFSFL
CEEEEEECCCCCEEEHHHHHCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHH
AIIPIGLNIWSDVHPEKYINVDTVMSHLSGWLLILLVLLAVFAAVGIGVFKTFNSYYQYT
HHHHHCHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
ISMDNERIYVQKGWLSKQSFSIRKDKVQAVIYKQNGYQKLLGVTTIKLISAGEILPSEDQ
EEECCCEEEEEECCCCCCCCCHHHCCEEEEEEECCCHHHHHHHHHHHHEECCCCCCCCCC
NLNEFFPYLPTEKAHELIAIMLPEFQLRSMTHYASPKAKKLIWLRPPIFASLVAAIGFWK
CHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHH
PLFFILGAIVLVFTYINRIREYRHTAFRLEDTHVQLRSGAFTVETLVTKRAKLLELQFER
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHH
SLLQRMFGVMSVKLTNRAHPVHVTTLLDIDSSLQPLITSWFEARTKDVEIDPHSQYSSLK
HHHHHHHHHHEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH
QEACPIPSYVEVNSK
HHCCCCCCCEEECCC
>Mature Secondary Structure 
TFRYSKLKLFYDMLDLIKNNLFILFILFLNAGSNSMFMNIVQWGAIAVFGFSFLFRIYE
CCCHHHHHHHHHHHHHHHCCHHEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TLFTKVVFAEDGIHIHKGLFSKSEQFIPREKFENVQTQANVLQRLFGVQSITMETGEATS
HHHHHHHHCCCCCEEHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCC
DVTLKFVSKADCIKIEDYVLRNGNQEKQVGEAIHGSERQVLFTTTIRDILKASLLSFSFL
CEEEEEECCCCCEEEHHHHHCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHH
AIIPIGLNIWSDVHPEKYINVDTVMSHLSGWLLILLVLLAVFAAVGIGVFKTFNSYYQYT
HHHHHCHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
ISMDNERIYVQKGWLSKQSFSIRKDKVQAVIYKQNGYQKLLGVTTIKLISAGEILPSEDQ
EEECCCEEEEEECCCCCCCCCHHHCCEEEEEEECCCHHHHHHHHHHHHEECCCCCCCCCC
NLNEFFPYLPTEKAHELIAIMLPEFQLRSMTHYASPKAKKLIWLRPPIFASLVAAIGFWK
CHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHH
PLFFILGAIVLVFTYINRIREYRHTAFRLEDTHVQLRSGAFTVETLVTKRAKLLELQFER
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHH
SLLQRMFGVMSVKLTNRAHPVHVTTLLDIDSSLQPLITSWFEARTKDVEIDPHSQYSSLK
HHHHHHHHHHEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH
QEACPIPSYVEVNSK
HHCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]