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The map label for this gene is yabM [H]

Identifier: 138893729

GI number: 138893729

Start: 61626

End: 63182

Strand: Direct

Name: yabM [H]

Synonym: GTNG_0050

Alternate gene names: 138893729

Gene position: 61626-63182 (Clockwise)

Preceding gene: 138893728

Following gene: 138893730

Centisome position: 1.74

GC content: 52.79

Gene sequence:

>1557_bases
ATGGGGAACGTATGGAAAGGCGCAGCTGTATTGACGGTTGCTGCTTTGCTGACGAAGCTGTTAAGCGCGTTGTACCGTAT
CCCGTATCAAAATATGGTCGGGGATGTCGGTTTTTATATTTACCAACAAGTGTATCCGATTTACGGCATTGTTGTAGCGA
TGTCACTAGCGGGCTACCCGGTCGCTATCTCGAAGCTCATCGCTAAGAGGTTCGTGGAAGGAGATGCGGCGGGAGCAGCC
GCCGTTAGGCGCATCGCGCTGCTGTTGTTAAGCGCGCTCGGTGTTATGCTGTTTGCTGGTTTGTATGCAGGGGCCGAAAC
GGTGGCGTCATGGATGGGGGACGGTCGGCTTGAACCGCTGTTGCGGTTGCTTTCATTTTCATTTTTGTTTTTTCCGTTGA
TCGCTGTGCTGCGTGGTTATTTCCAAGGCCAGCATGACATGATGCCGACTGCGGTGTCTCAAGTTGGTGAACAGTTCGTG
CGGGTGACAGCGATTTTAGGGCTGTCATATTGGGCGATGCGGCGTGGTGCAGATGTTTATTCCTGCGGCATGGCAGCGAT
TGCAGGGACACTCGGCGGTATGGCGGCGGCGCTTCTTATTTTGCTCTTTTATTCCGCTAAGCGCAGACGAAAAAAAACGG
CCGGCCGCACGCCCACGGCTTCGTTCTTACATGTAGGCCGACATTTATTGACAGTTGGAACGATCGTTTGTTTGACAAAT
ATGGCATTGACGCTTATTCCACTCGTGGATTCGTTTTTGTTTGTCCCACTTCTTCATGAAACAGGAGCAAGCCTAGATGA
GGTGAAATGGTTAAAAGGGGTGTATGATCGCGGGCAACCGCTCATCCAGCTTGGCACAGTTGTCGGCACATCGCTTTCAT
TGGCGCTTGTCCCATTTATCTCTAGCGCCCAACGCAGCCAAGGAGCCATTTTCACGCAAGGTCTGTTGCCATTTCGATTT
GCTGCCGTCATCGGTGTTGGCGCTTCTTTAGGGCTCATTTGCCTGATTCGGCCGATCAATACGATGTTGTTTGAAAATGA
TCGTGGCTCACTCGTTCTCGCTGTCTTGTCCGCTTCTGTCTTTTTTACAACGATGGCACTGACTTCGTCCGCCATGTTGC
AAGGAATGGGAAAAGAGTGGGCGGCCGCTGCCGGTGTAGCGGTGGCCGTAGCGGGAAAAATGGCGCTCATGCATTGGCTT
GTGCCGCCGTTTGGCGTCCTTGGCGCGGCCTTAGCGACGACGGGGGCTTATGCGCTCATGGCTTGCTTTTTATATGTATG
CTTGCGGCGTGAATGCCAACTGACCAACATCCAAAAGTATGCCTATCCAATCGTGAAGGCTGGCGTCGCGATGGTTGTCG
TGCTGCAGTTGTATATGTGGCTTATGGATGCTGCCGCCGGCGGACGCTTATGGGCAACCGCTGAGGCGCTTGGAGGCGTC
GCCGTCGGTGCGATCGTCTATATCGTATGCATTGTCAAAGGGAACGTTTTCTCCGAGGAGGAATTGTCCGCTCTCCCGTT
GGCTAATAAATTTCGTCTACTATCAGGAAGCAGGTGA

Upstream 100 bases:

>100_bases
CCATGGCAATGGAACCATTGGCGGCTTTCTCGGTCGCTGGCGAATGTCCCCAGCCTGGCTATCCGTCGGCAAACGCCATG
AAGGCGGGAGGAAAAGCGAT

Downstream 100 bases:

>100_bases
TCGGCGATGAATACGATTTATATTTTCGGACTTGGCGCTGGGGATTTCGAACAGCTGCCGGTCGGTGTATACCGAAAGCT
CAAGCGGGCGCATCCGCTCT

Product: stage V sporulation protein B-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 518; Mature: 517

Protein sequence:

>518_residues
MGNVWKGAAVLTVAALLTKLLSALYRIPYQNMVGDVGFYIYQQVYPIYGIVVAMSLAGYPVAISKLIAKRFVEGDAAGAA
AVRRIALLLLSALGVMLFAGLYAGAETVASWMGDGRLEPLLRLLSFSFLFFPLIAVLRGYFQGQHDMMPTAVSQVGEQFV
RVTAILGLSYWAMRRGADVYSCGMAAIAGTLGGMAAALLILLFYSAKRRRKKTAGRTPTASFLHVGRHLLTVGTIVCLTN
MALTLIPLVDSFLFVPLLHETGASLDEVKWLKGVYDRGQPLIQLGTVVGTSLSLALVPFISSAQRSQGAIFTQGLLPFRF
AAVIGVGASLGLICLIRPINTMLFENDRGSLVLAVLSASVFFTTMALTSSAMLQGMGKEWAAAAGVAVAVAGKMALMHWL
VPPFGVLGAALATTGAYALMACFLYVCLRRECQLTNIQKYAYPIVKAGVAMVVVLQLYMWLMDAAAGGRLWATAEALGGV
AVGAIVYIVCIVKGNVFSEEELSALPLANKFRLLSGSR

Sequences:

>Translated_518_residues
MGNVWKGAAVLTVAALLTKLLSALYRIPYQNMVGDVGFYIYQQVYPIYGIVVAMSLAGYPVAISKLIAKRFVEGDAAGAA
AVRRIALLLLSALGVMLFAGLYAGAETVASWMGDGRLEPLLRLLSFSFLFFPLIAVLRGYFQGQHDMMPTAVSQVGEQFV
RVTAILGLSYWAMRRGADVYSCGMAAIAGTLGGMAAALLILLFYSAKRRRKKTAGRTPTASFLHVGRHLLTVGTIVCLTN
MALTLIPLVDSFLFVPLLHETGASLDEVKWLKGVYDRGQPLIQLGTVVGTSLSLALVPFISSAQRSQGAIFTQGLLPFRF
AAVIGVGASLGLICLIRPINTMLFENDRGSLVLAVLSASVFFTTMALTSSAMLQGMGKEWAAAAGVAVAVAGKMALMHWL
VPPFGVLGAALATTGAYALMACFLYVCLRRECQLTNIQKYAYPIVKAGVAMVVVLQLYMWLMDAAAGGRLWATAEALGGV
AVGAIVYIVCIVKGNVFSEEELSALPLANKFRLLSGSR
>Mature_517_residues
GNVWKGAAVLTVAALLTKLLSALYRIPYQNMVGDVGFYIYQQVYPIYGIVVAMSLAGYPVAISKLIAKRFVEGDAAGAAA
VRRIALLLLSALGVMLFAGLYAGAETVASWMGDGRLEPLLRLLSFSFLFFPLIAVLRGYFQGQHDMMPTAVSQVGEQFVR
VTAILGLSYWAMRRGADVYSCGMAAIAGTLGGMAAALLILLFYSAKRRRKKTAGRTPTASFLHVGRHLLTVGTIVCLTNM
ALTLIPLVDSFLFVPLLHETGASLDEVKWLKGVYDRGQPLIQLGTVVGTSLSLALVPFISSAQRSQGAIFTQGLLPFRFA
AVIGVGASLGLICLIRPINTMLFENDRGSLVLAVLSASVFFTTMALTSSAMLQGMGKEWAAAAGVAVAVAGKMALMHWLV
PPFGVLGAALATTGAYALMACFLYVCLRRECQLTNIQKYAYPIVKAGVAMVVVLQLYMWLMDAAAGGRLWATAEALGGVA
VGAIVYIVCIVKGNVFSEEELSALPLANKFRLLSGSR

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 55211; Mature: 55079

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHCCCCC
>Mature Secondary Structure 
GNVWKGAAVLTVAALLTKLLSALYRIPYQNMVGDVGFYIYQQVYPIYGIVVAMSLAGYP
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH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HHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]