Click here to switch to the map view.

The map label for this gene is yabE [H]

Identifier: 138893711

GI number: 138893711

Start: 45151

End: 46383

Strand: Direct

Name: yabE [H]

Synonym: GTNG_0032

Alternate gene names: 138893711

Gene position: 45151-46383 (Clockwise)

Preceding gene: 138893710

Following gene: 138893712

Centisome position: 1.27

GC content: 47.12

Gene sequence:

>1233_bases
ATGGCACCAAACGGTAGGAAATGGTTAGACTTATGGAGGAAAAACGTGACCGCTACGGCGAGTGGATTTCTTGCTATCTC
CGCGACAACAGGGGTCGCTGGGTATGAGATGGCGAAAGACGATGTGACGTTAACCGCCAATGGGAAAAAACAAGAAATTC
GTACTCATGCGGAGAATGTAAAGGAGTTGCTTGAAGAGCAAGGCATTCGGCCGCGCAAGGAAGATTACGTATATCCGTCT
TTAAATACACCGATTACTGATGATCTGCATATCATTTGGGAAGCAAGCAAAGAAGTGACATTGACGGTAAATGGGAAAGC
GAAAAAAGTGTGGACGACAGCTGACACAGTTGAGGAACTGCTCCGTTCGCAACACGTGGCGGTCGGGCCGTACGATAAAG
TGACGCCAACACTTTCGGCGAAAATCAAAAAAGGCATGGACATTGGTGTTGAAAAAGCATTTCCTGTCCGCGTCAATGTT
GGTGGTAAACAGCAACAGGCATGGACAACTTCGACTACGGTCGCTGACTTTTTGAAGCAGCAAGGAATTGAGCTGGGCGA
ACTCGATCGAATTGAGCCTTCCTTGCAAGAAAAGGTCAAAGAACAAATGACGATTCACATCACTCGGGTAAAAAAAGTCA
CCGATGTAGTGGAAGAGCCTGTTGACTTTGCTGTGATGACGAAACAGGATAGTTCGCTACCAAAAGGAGAGCGACGCGTG
ATTGAGCCTGGAGAAAAAGGAAAAATTGAAAAAACGTATGAAGTAACGTTTGAAAACGGCAAAGAAGTGGCGCGGAAATT
GATTGCGACAAAAACGGTGAAAGAAAGTAAAGCGCGCATTGTCGCCATCGGCACAAAAACGGTGGAACCACCTAAACCAT
CCGCCATTGGCACAAAAACTAAGAGATCCGACCAGCCATCTTCGCGCGGATCTAATCAAGCTGCGAAGACATTTTATGTT
ACTGCCACTGCCTATACGGCCTATTGCAAAGGCTGTTCAGGCGTAACGAGAACAGGCGTTAACTTGCGTCAAAATCCTTC
CACTAAAGTCATTGCTGTCGACCCATCCATCATCCCCCTTGGGTCGAAGGTATATGTGGAAGGATACGGATATGCCATTG
CCGCTGACACCGGCTCAGGCATTAAAGGATACGAAATTGATGTATTTTTCCCGGAAGAGTCAGATGCGATGCGTTGGGGA
AGAAAGCGCGTCAAAATACGGGTATTGCCATAG

Upstream 100 bases:

>100_bases
TCCTTCCTTTTTCACTGAATTTTCTGCATAAAAGAGTGTGCTCGTGCGTACACGTTAGAGGGAGAGGGGAATCTCGGAGG
AAAAGGAGGCGTTTCATTTC

Downstream 100 bases:

>100_bases
AAATGCACTCGAAGAACAGAGCGGAGGGTTTTTTCCCTCTGCTTTTTTTCGTTATAATGACATTGTGCCGAGACAATGCG
CACTTCACCACTTCTGTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MAPNGRKWLDLWRKNVTATASGFLAISATTGVAGYEMAKDDVTLTANGKKQEIRTHAENVKELLEEQGIRPRKEDYVYPS
LNTPITDDLHIIWEASKEVTLTVNGKAKKVWTTADTVEELLRSQHVAVGPYDKVTPTLSAKIKKGMDIGVEKAFPVRVNV
GGKQQQAWTTSTTVADFLKQQGIELGELDRIEPSLQEKVKEQMTIHITRVKKVTDVVEEPVDFAVMTKQDSSLPKGERRV
IEPGEKGKIEKTYEVTFENGKEVARKLIATKTVKESKARIVAIGTKTVEPPKPSAIGTKTKRSDQPSSRGSNQAAKTFYV
TATAYTAYCKGCSGVTRTGVNLRQNPSTKVIAVDPSIIPLGSKVYVEGYGYAIAADTGSGIKGYEIDVFFPEESDAMRWG
RKRVKIRVLP

Sequences:

>Translated_410_residues
MAPNGRKWLDLWRKNVTATASGFLAISATTGVAGYEMAKDDVTLTANGKKQEIRTHAENVKELLEEQGIRPRKEDYVYPS
LNTPITDDLHIIWEASKEVTLTVNGKAKKVWTTADTVEELLRSQHVAVGPYDKVTPTLSAKIKKGMDIGVEKAFPVRVNV
GGKQQQAWTTSTTVADFLKQQGIELGELDRIEPSLQEKVKEQMTIHITRVKKVTDVVEEPVDFAVMTKQDSSLPKGERRV
IEPGEKGKIEKTYEVTFENGKEVARKLIATKTVKESKARIVAIGTKTVEPPKPSAIGTKTKRSDQPSSRGSNQAAKTFYV
TATAYTAYCKGCSGVTRTGVNLRQNPSTKVIAVDPSIIPLGSKVYVEGYGYAIAADTGSGIKGYEIDVFFPEESDAMRWG
RKRVKIRVLP
>Mature_409_residues
APNGRKWLDLWRKNVTATASGFLAISATTGVAGYEMAKDDVTLTANGKKQEIRTHAENVKELLEEQGIRPRKEDYVYPSL
NTPITDDLHIIWEASKEVTLTVNGKAKKVWTTADTVEELLRSQHVAVGPYDKVTPTLSAKIKKGMDIGVEKAFPVRVNVG
GKQQQAWTTSTTVADFLKQQGIELGELDRIEPSLQEKVKEQMTIHITRVKKVTDVVEEPVDFAVMTKQDSSLPKGERRVI
EPGEKGKIEKTYEVTFENGKEVARKLIATKTVKESKARIVAIGTKTVEPPKPSAIGTKTKRSDQPSSRGSNQAAKTFYVT
ATAYTAYCKGCSGVTRTGVNLRQNPSTKVIAVDPSIIPLGSKVYVEGYGYAIAADTGSGIKGYEIDVFFPEESDAMRWGR
KRVKIRVLP

Specific function: Unknown

COG id: COG3583

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G5 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR007137
- InterPro:   IPR011098 [H]

Pfam domain/function: PF06725 3D; PF03990 DUF348; PF07501 G5 [H]

EC number: NA

Molecular weight: Translated: 45159; Mature: 45028

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS51109 G5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPNGRKWLDLWRKNVTATASGFLAISATTGVAGYEMAKDDVTLTANGKKQEIRTHAENV
CCCCCHHHHHHHHCCCCEECCCEEEEEECCCCCCCEECCCCEEEEECCCHHHHHHHHHHH
KELLEEQGIRPRKEDYVYPSLNTPITDDLHIIWEASKEVTLTVNGKAKKVWTTADTVEEL
HHHHHHCCCCCCHHCEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEECHHHHHHH
LRSQHVAVGPYDKVTPTLSAKIKKGMDIGVEKAFPVRVNVGGKQQQAWTTSTTVADFLKQ
HHHCCEEECCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEECHHHHHHHHHH
QGIELGELDRIEPSLQEKVKEQMTIHITRVKKVTDVVEEPVDFAVMTKQDSSLPKGERRV
CCCCCCCCCCCCHHHHHHHHHHHEEEEEHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEE
IEPGEKGKIEKTYEVTFENGKEVARKLIATKTVKESKARIVAIGTKTVEPPKPSAIGTKT
CCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC
KRSDQPSSRGSNQAAKTFYVTATAYTAYCKGCSGVTRTGVNLRQNPSTKVIAVDPSIIPL
CCCCCCCCCCCCCCCEEEEEEEEHHHHHHCCCCCCEECCCCCCCCCCEEEEEECCCEEEC
GSKVYVEGYGYAIAADTGSGIKGYEIDVFFPEESDAMRWGRKRVKIRVLP
CCEEEEEECCEEEEECCCCCCCCEEEEEEECCCCHHHHCCCEEEEEEECC
>Mature Secondary Structure 
APNGRKWLDLWRKNVTATASGFLAISATTGVAGYEMAKDDVTLTANGKKQEIRTHAENV
CCCCHHHHHHHHCCCCEECCCEEEEEECCCCCCCEECCCCEEEEECCCHHHHHHHHHHH
KELLEEQGIRPRKEDYVYPSLNTPITDDLHIIWEASKEVTLTVNGKAKKVWTTADTVEEL
HHHHHHCCCCCCHHCEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEECHHHHHHH
LRSQHVAVGPYDKVTPTLSAKIKKGMDIGVEKAFPVRVNVGGKQQQAWTTSTTVADFLKQ
HHHCCEEECCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEECHHHHHHHHHH
QGIELGELDRIEPSLQEKVKEQMTIHITRVKKVTDVVEEPVDFAVMTKQDSSLPKGERRV
CCCCCCCCCCCCHHHHHHHHHHHEEEEEHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEE
IEPGEKGKIEKTYEVTFENGKEVARKLIATKTVKESKARIVAIGTKTVEPPKPSAIGTKT
CCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC
KRSDQPSSRGSNQAAKTFYVTATAYTAYCKGCSGVTRTGVNLRQNPSTKVIAVDPSIIPL
CCCCCCCCCCCCCCCEEEEEEEEHHHHHHCCCCCCEECCCCCCCCCCEEEEEECCCEEEC
GSKVYVEGYGYAIAADTGSGIKGYEIDVFFPEESDAMRWGRKRVKIRVLP
CCEEEEEECCEEEEECCCCCCCCEEEEEEECCCCHHHHCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]