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The map label for this gene is pdxT [H]

Identifier: 138893691

GI number: 138893691

Start: 21004

End: 21591

Strand: Direct

Name: pdxT [H]

Synonym: GTNG_0012

Alternate gene names: 138893691

Gene position: 21004-21591 (Clockwise)

Preceding gene: 138893690

Following gene: 138893692

Centisome position: 0.59

GC content: 53.91

Gene sequence:

>588_bases
ATGAAAATAGGTGTACTCGGACTGCAAGGAGCCGTGCAAGAACATGTCCGCGCCATTGAGGCGTGCGGCGCCGAGGCGGT
TGTCGTGAAAAAGACAGAGCAGCTCACTGGACTCGACGGACTCGTGTTGCCGGGCGGCGAAAGCACAACGATGCGTCGTC
TCATCGATCGGTATGGACTTATGGAACCGCTGAAGCAATTTGCTGCTGACGGCAAACCGATGTTCGGTACGTGCGCCGGG
CTCATTTTGCTGGCGAAACGAATCGTCGGCTACGATGAGCCCCATCTAGGTTTGATGGACATTACGGTTGAACGAAACTC
GTTCGGCCGGCAACGGGAAAGCTTTGAAGCTGAGCTGTCGATCAAAGGGGTCGGCGATGGGTTTGTCGGCGTTTTTATCC
GCGCACCGCACATCGTTGAGGTCGGGGACGAGGTCGAAGTCCTCGCGACATACAATGACCGCATTGTCGCGGCTCGACAA
GGCCAGTTTCTTGGTTGCTCGTTCCACCCTGAGTTGACTGATGACCATCGGTTAATGCGATATTTCTTAAATATGGTGAA
GGAAGCAAAAACGGTATCAAGCATTTAA

Upstream 100 bases:

>100_bases
GCTGGGCGGTGCGATGCGCGGCATCGATGTCGCGACATTGTTGCCAGAGCACCGCATGCAAGAACGTGGCTGGTAAGCTA
GGCAAAGGAGCAAAGGAACG

Downstream 100 bases:

>100_bases
TCAATGGGAAAGCGATGAGAGGAACTAGTAGCAGGCGTCCGTCCTTTCAGAGAGCCGGTGGGTGGTGTGAACCGGTAGGA
GGAGCCTGTGAATCCATCCT

Product: glutamine amidotransferase subunit PdxT

Products: NA

Alternate protein names: Glutamine amidotransferase glutaminase subunit pdxT [H]

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKIGVLGLQGAVQEHVRAIEACGAEAVVVKKTEQLTGLDGLVLPGGESTTMRRLIDRYGLMEPLKQFAADGKPMFGTCAG
LILLAKRIVGYDEPHLGLMDITVERNSFGRQRESFEAELSIKGVGDGFVGVFIRAPHIVEVGDEVEVLATYNDRIVAARQ
GQFLGCSFHPELTDDHRLMRYFLNMVKEAKTVSSI

Sequences:

>Translated_195_residues
MKIGVLGLQGAVQEHVRAIEACGAEAVVVKKTEQLTGLDGLVLPGGESTTMRRLIDRYGLMEPLKQFAADGKPMFGTCAG
LILLAKRIVGYDEPHLGLMDITVERNSFGRQRESFEAELSIKGVGDGFVGVFIRAPHIVEVGDEVEVLATYNDRIVAARQ
GQFLGCSFHPELTDDHRLMRYFLNMVKEAKTVSSI
>Mature_195_residues
MKIGVLGLQGAVQEHVRAIEACGAEAVVVKKTEQLTGLDGLVLPGGESTTMRRLIDRYGLMEPLKQFAADGKPMFGTCAG
LILLAKRIVGYDEPHLGLMDITVERNSFGRQRESFEAELSIKGVGDGFVGVFIRAPHIVEVGDEVEVLATYNDRIVAARQ
GQFLGCSFHPELTDDHRLMRYFLNMVKEAKTVSSI

Specific function: Involved in the hydrolysis of glutamine to glutamate and ammonia. Channels an ammonia molecule to pdxS [H]

COG id: COG0311

COG function: function code H; Predicted glutamine amidotransferase involved in pyridoxine biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glutamine amidotransferase pdxT/SNO family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323742, Length=203, Percent_Identity=38.423645320197, Blast_Score=117, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6323995, Length=208, Percent_Identity=36.5384615384615, Blast_Score=112, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6321048, Length=208, Percent_Identity=37.0192307692308, Blast_Score=112, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002161
- InterPro:   IPR021196 [H]

Pfam domain/function: PF01174 SNO [H]

EC number: NA

Molecular weight: Translated: 21364; Mature: 21364

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS51130 PDXT_SNO_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGVLGLQGAVQEHVRAIEACGAEAVVVKKTEQLTGLDGLVLPGGESTTMRRLIDRYGL
CEEEEECCHHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCEEECCCCHHHHHHHHHHHCH
MEPLKQFAADGKPMFGTCAGLILLAKRIVGYDEPHLGLMDITVERNSFGRQRESFEAELS
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHCCEEEEE
IKGVGDGFVGVFIRAPHIVEVGDEVEVLATYNDRIVAARQGQFLGCSFHPELTDDHRLMR
EEECCCCEEEEEEECCEEEECCCCEEEEEECCCEEEEECCCCEEEEECCCCCCCHHHHHH
YFLNMVKEAKTVSSI
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIGVLGLQGAVQEHVRAIEACGAEAVVVKKTEQLTGLDGLVLPGGESTTMRRLIDRYGL
CEEEEECCHHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCEEECCCCHHHHHHHHHHHCH
MEPLKQFAADGKPMFGTCAGLILLAKRIVGYDEPHLGLMDITVERNSFGRQRESFEAELS
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHCCEEEEE
IKGVGDGFVGVFIRAPHIVEVGDEVEVLATYNDRIVAARQGQFLGCSFHPELTDDHRLMR
EEECCCCEEEEEEECCEEEECCCCEEEEEECCCEEEEECCCCEEEEECCCCCCCHHHHHH
YFLNMVKEAKTVSSI
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA