Click here to switch to the map view.

The map label for this gene is yaaA [H]

Identifier: 138893682

GI number: 138893682

Start: 3059

End: 3280

Strand: Direct

Name: yaaA [H]

Synonym: GTNG_0003

Alternate gene names: 138893682

Gene position: 3059-3280 (Clockwise)

Preceding gene: 138893681

Following gene: 138893683

Centisome position: 0.09

GC content: 46.4

Gene sequence:

>222_bases
ATGGAACAAAAAGTAACAATTACTACGGAAACGATTACGTTAGGACAGCTGCTAAAGCTAGTGAATTTGATTGAGACAGG
CGGCGCAGCGAAATGGTTTTTGCAAGAATACAATGTATTCGTTAACGGTGAAAAAGAGGACCGGCGCGGCCGGAAACTGA
AAGACGGCGACCGAGTTGAGATTGAACGGATCGGCACGTTTATCGTCACGCAAGTGGAGTAG

Upstream 100 bases:

>100_bases
CCCTTTGACTGTCCTTGCTCATCGGCTTTCTTTGCGAGTGGAAGAGTTTTTCGGTAAAATAAAAGAATAGGCAGTTTGAA
GGAAAGCGAGCGATAAGCGG

Downstream 100 bases:

>100_bases
GTGAAGGCCGGGTGTTTCTGACTAACTTAACACTAACGAACTACCGCAATTATGAACATGAGACGTTAAGTTTTGACCAA
GGCGTTAACATCATCTTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MEQKVTITTETITLGQLLKLVNLIETGGAAKWFLQEYNVFVNGEKEDRRGRKLKDGDRVEIERIGTFIVTQVE

Sequences:

>Translated_73_residues
MEQKVTITTETITLGQLLKLVNLIETGGAAKWFLQEYNVFVNGEKEDRRGRKLKDGDRVEIERIGTFIVTQVE
>Mature_73_residues
MEQKVTITTETITLGQLLKLVNLIETGGAAKWFLQEYNVFVNGEKEDRRGRKLKDGDRVEIERIGTFIVTQVE

Specific function: Unknown

COG id: COG2501

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014330
- InterPro:   IPR002942 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8368; Mature: 8368

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQKVTITTETITLGQLLKLVNLIETGGAAKWFLQEYNVFVNGEKEDRRGRKLKDGDRVE
CCCEEEEEEEEECHHHHHHHHHHHHCCCCCEEEEEECEEEECCCCCCCCCCCCCCCCEEE
IERIGTFIVTQVE
EEECCEEEEEECC
>Mature Secondary Structure
MEQKVTITTETITLGQLLKLVNLIETGGAAKWFLQEYNVFVNGEKEDRRGRKLKDGDRVE
CCCEEEEEEEEECHHHHHHHHHHHHCCCCCEEEEEECEEEECCCCCCCCCCCCCCCCEEE
IERIGTFIVTQVE
EEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2987847; 7584024; 9384377 [H]