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The map label for this gene is dnaA [H]

Identifier: 138893680

GI number: 138893680

Start: 209

End: 1561

Strand: Direct

Name: dnaA [H]

Synonym: GTNG_0001

Alternate gene names: 138893680

Gene position: 209-1561 (Clockwise)

Preceding gene: NA

Following gene: 138893681

Centisome position: 0.01

GC content: 47.15

Gene sequence:

>1353_bases
GTGGAAAATATCCATGACTTATGGGATCGCGTGCTTGGAGAAATCGAACGAAAAATTAGCAAGCCGAGCTTTGAAACTTG
GCTTAAATCGACGAAAGCCCACTCTTTACGAGGTGACACGCTCGTCATCGTAGCCCCAAACGAGTTTGCTAGAGACTGGC
TTGATTCCCGCTATTCCCATTTAATTGCGGAAACCATTTACGCGATTACTGGAGAAGAGCTGGCGGTCAAATTTATCATT
CCGCCAAATCAGGCTGATGAAAAATTGGAGCTTCCGTCGTCGGCGAAAAAACAACGAAAGCCGTATGAAGAGGCGAACGA
CTTCCCACAGAGCATGTTAAATCCAAAATATACGTTCGATACGTTCGTTATTGGCTCTGGAAACCGGTTTGCTCATGCCG
CCTCGTTAGCGGTCGCTGAGGCGCCGGCTAAGGCGTATAACCCCCTCTTCATTTACGGCGGAGTCGGGCTTGGAAAGACA
CACTTAATGCACGCGATCGGCCATTACGTAATTGAACATAACCCATCCGCGAAAGTCGTCTATTTGTCTTCGGAAAAATT
TACAAACGAGTTTATTAACGCCATCCGCGATAACCGCCCTGACGACTTTCGCAATAAGTACCGGAACGTCGACGTTCTGC
TTATTGATGATATTCAATTTCTAGCTGGAAAAGAACAAACTCAAGAGGAATTTTTCCATACGTTTAACACACTGCATGAA
GAAAGCAAGCAAATCGTTATTTCGAGTGACCGGCCACCAAAAGAAATCCCGACGCTTGAAGATCGCTTGCGCTCTCGCTT
TGAGTGGGGACTGATCACGGACATCACGCCGCCTGATTTAGAAACGCGGATCGCCATTCTCCGCAAAAAAGCAAAGGCAG
AGGGATTTGACATCCCGAACGAAGTCATGCTTTATATCGCCAACCAAATTGATTCGAACATCCGTGAGCTCGAAGGCGCT
CTTATCCGCGTCGTCGCCTACTCATCGCTCATCAATAAAGAAATCACGGCTGACTTGGCAGCGGAAGCGTTGAAGGATAT
CATTCCGAGCGCGAAGCCAAAAGTAATTACAATCCAGGACATTCAGCGCGTTGTTGGGCAGCATTTCAACATTAAGCTTG
AAGATTTTAAAGCAAAAAAACGGACAAAATCGGTCGCGTTCCCCCGACAAATCGCCATGTATCTCTCCCGTGAGCTGACT
GACTGTTCGCTGCCGAAAATCGGCGACGAATTTGGCGGCCGCGATCATACGACGGTCATCCACGCCCATGAAAAAATATC
AAAGCTTTTGCAAACCGACACGCAGCTACAGAAACATTTAAAAGAAATCCAAGAAAAGCTGAAGCAACTGTGA

Upstream 100 bases:

>100_bases
GATTTTGTCGAAAAGCCGCCTTTTTTCCTTAAATATATTTTTCCACAAATTTATTTTTTTAAACGAACCATTATCCTCTG
AATTAAGGGAGGGGCAACGG

Downstream 100 bases:

>100_bases
ATAACCGGCTTTGTTTTATGCACAGCTTATCCACATGTGGACAGGCTGTGCTTACTTCGCTTTTCTTGTTTATCCACATA
CTAACAAGCCATATGACTAT

Product: chromosomal replication initiation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MENIHDLWDRVLGEIERKISKPSFETWLKSTKAHSLRGDTLVIVAPNEFARDWLDSRYSHLIAETIYAITGEELAVKFII
PPNQADEKLELPSSAKKQRKPYEEANDFPQSMLNPKYTFDTFVIGSGNRFAHAASLAVAEAPAKAYNPLFIYGGVGLGKT
HLMHAIGHYVIEHNPSAKVVYLSSEKFTNEFINAIRDNRPDDFRNKYRNVDVLLIDDIQFLAGKEQTQEEFFHTFNTLHE
ESKQIVISSDRPPKEIPTLEDRLRSRFEWGLITDITPPDLETRIAILRKKAKAEGFDIPNEVMLYIANQIDSNIRELEGA
LIRVVAYSSLINKEITADLAAEALKDIIPSAKPKVITIQDIQRVVGQHFNIKLEDFKAKKRTKSVAFPRQIAMYLSRELT
DCSLPKIGDEFGGRDHTTVIHAHEKISKLLQTDTQLQKHLKEIQEKLKQL

Sequences:

>Translated_450_residues
MENIHDLWDRVLGEIERKISKPSFETWLKSTKAHSLRGDTLVIVAPNEFARDWLDSRYSHLIAETIYAITGEELAVKFII
PPNQADEKLELPSSAKKQRKPYEEANDFPQSMLNPKYTFDTFVIGSGNRFAHAASLAVAEAPAKAYNPLFIYGGVGLGKT
HLMHAIGHYVIEHNPSAKVVYLSSEKFTNEFINAIRDNRPDDFRNKYRNVDVLLIDDIQFLAGKEQTQEEFFHTFNTLHE
ESKQIVISSDRPPKEIPTLEDRLRSRFEWGLITDITPPDLETRIAILRKKAKAEGFDIPNEVMLYIANQIDSNIRELEGA
LIRVVAYSSLINKEITADLAAEALKDIIPSAKPKVITIQDIQRVVGQHFNIKLEDFKAKKRTKSVAFPRQIAMYLSRELT
DCSLPKIGDEFGGRDHTTVIHAHEKISKLLQTDTQLQKHLKEIQEKLKQL
>Mature_450_residues
MENIHDLWDRVLGEIERKISKPSFETWLKSTKAHSLRGDTLVIVAPNEFARDWLDSRYSHLIAETIYAITGEELAVKFII
PPNQADEKLELPSSAKKQRKPYEEANDFPQSMLNPKYTFDTFVIGSGNRFAHAASLAVAEAPAKAYNPLFIYGGVGLGKT
HLMHAIGHYVIEHNPSAKVVYLSSEKFTNEFINAIRDNRPDDFRNKYRNVDVLLIDDIQFLAGKEQTQEEFFHTFNTLHE
ESKQIVISSDRPPKEIPTLEDRLRSRFEWGLITDITPPDLETRIAILRKKAKAEGFDIPNEVMLYIANQIDSNIRELEGA
LIRVVAYSSLINKEITADLAAEALKDIIPSAKPKVITIQDIQRVVGQHFNIKLEDFKAKKRTKSVAFPRQIAMYLSRELT
DCSLPKIGDEFGGRDHTTVIHAHEKISKLLQTDTQLQKHLKEIQEKLKQL

Specific function: Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box):5'-TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phosph

COG id: COG0593

COG function: function code L; ATPase involved in DNA replication initiation

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dnaA family [H]

Homologues:

Organism=Escherichia coli, GI2367267, Length=445, Percent_Identity=44.7191011235955, Blast_Score=390, Evalue=1e-110,
Organism=Escherichia coli, GI226510964, Length=229, Percent_Identity=24.8908296943231, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001957
- InterPro:   IPR020591
- InterPro:   IPR018312
- InterPro:   IPR013159
- InterPro:   IPR013317
- InterPro:   IPR010921 [H]

Pfam domain/function: PF00308 Bac_DnaA; PF08299 Bac_DnaA_C [H]

EC number: NA

Molecular weight: Translated: 51352; Mature: 51352

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS01008 DNAA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENIHDLWDRVLGEIERKISKPSFETWLKSTKAHSLRGDTLVIVAPNEFARDWLDSRYSH
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHH
LIAETIYAITGEELAVKFIIPPNQADEKLELPSSAKKQRKPYEEANDFPQSMLNPKYTFD
HHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHCCCHHHHHCCHHHHCCCCEEEE
TFVIGSGNRFAHAASLAVAEAPAKAYNPLFIYGGVGLGKTHLMHAIGHYVIEHNPSAKVV
EEEEECCCCHHHHHHHHHHHCCHHHCCCEEEECCCCCCHHHHHHHHHHHHEECCCCEEEE
YLSSEKFTNEFINAIRDNRPDDFRNKYRNVDVLLIDDIQFLAGKEQTQEEFFHTFNTLHE
EECCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEECCHHHHHCCHHHHHHHHHHHHHHHH
ESKQIVISSDRPPKEIPTLEDRLRSRFEWGLITDITPPDLETRIAILRKKAKAEGFDIPN
CCCEEEEECCCCCCCCCCHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCH
EVMLYIANQIDSNIRELEGALIRVVAYSSLINKEITADLAAEALKDIIPSAKPKVITIQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHH
IQRVVGQHFNIKLEDFKAKKRTKSVAFPRQIAMYLSRELTDCSLPKIGDEFGGRDHTTVI
HHHHHCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEE
HAHEKISKLLQTDTQLQKHLKEIQEKLKQL
EHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MENIHDLWDRVLGEIERKISKPSFETWLKSTKAHSLRGDTLVIVAPNEFARDWLDSRYSH
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHH
LIAETIYAITGEELAVKFIIPPNQADEKLELPSSAKKQRKPYEEANDFPQSMLNPKYTFD
HHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHCCCHHHHHCCHHHHCCCCEEEE
TFVIGSGNRFAHAASLAVAEAPAKAYNPLFIYGGVGLGKTHLMHAIGHYVIEHNPSAKVV
EEEEECCCCHHHHHHHHHHHCCHHHCCCEEEECCCCCCHHHHHHHHHHHHEECCCCEEEE
YLSSEKFTNEFINAIRDNRPDDFRNKYRNVDVLLIDDIQFLAGKEQTQEEFFHTFNTLHE
EECCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEECCHHHHHCCHHHHHHHHHHHHHHHH
ESKQIVISSDRPPKEIPTLEDRLRSRFEWGLITDITPPDLETRIAILRKKAKAEGFDIPN
CCCEEEEECCCCCCCCCCHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCH
EVMLYIANQIDSNIRELEGALIRVVAYSSLINKEITADLAAEALKDIIPSAKPKVITIQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHH
IQRVVGQHFNIKLEDFKAKKRTKSVAFPRQIAMYLSRELTDCSLPKIGDEFGGRDHTTVI
HHHHHCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEE
HAHEKISKLLQTDTQLQKHLKEIQEKLKQL
EHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA