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The map label for this gene is rng [H]

Identifier: 134302803

GI number: 134302803

Start: 1896544

End: 1898040

Strand: Reverse

Name: rng [H]

Synonym: FTW_2027

Alternate gene names: 134302803

Gene position: 1898040-1896544 (Counterclockwise)

Preceding gene: NA

Following gene: 134302802

Centisome position: 99.98

GC content: 27.86

Gene sequence:

>1497_bases
ATGTCATTTAATACAGAAATCTTTTTGAATATAAACAAGTATGAACAAAGAATAGCCATAAAAGAAAACAATATCCTCAA
AGAAATTTTGATAGAACGTGATAATCAAAAAAGAATAGTTGGAAACATTTATAAAGGAAAAATAATCAGAGTTCTTCCTG
GAATGCAAGCAGCCTTTGTAGATATTGGTTTAGAAAAGGCAGGATTTTTACATTTATCAGAAGTCATACCTCTAGAGAAG
GAAGATGATGATTCTGATGAAAATTTTAAGCTCAAAAAATTAAATACCGAAGATATCAATAAATGGTTACGTGAAGGTCA
AGAAGTTCTAGTTCAAGTAGTCAAAGAGAGCATAGGTAATAAAGGAGTAAAATTAACATCACATTTATCAGTATCTTCAC
GTTTTTTGGTTTTTTTACCTGATTTAGATCATATAGGTGTTTCACTTAAGATAACAAATGAACAAGAAAAGCAACGTCTA
TTAGAATCCATAAAAAAAATTACCCAAAGTGAAAATCCACGTGGATATATTCTAAGAACAGCTGCTGAAGGTGCTAGTTA
TGAAGAATTAGAGAATGATATAAAATTTTTGAATAACTTATGGCAAGATATTTTAGATATTTCTAGTACAATCATCAAAC
CTGGTGTTGTTTATGAAGATTTTAGTTTAATAATCAAGACTATCAATATATTTGCTAATGATAATCTCGATAAAATACTT
GTAGATAATATCGATTCATATAAAGAAATATGCCACTTTGCAGATAAATATATTCCTGGTTTAAGAGAGAAAATAGAACT
TTATCAAAAGCATAATATCTTTGAAGAGTATGATATTGAAAATGAGATAAATAAAGCTTTAGATAAAACGGTTTATCTAA
AATCTGGTGGTTACTTAGTTATCGAACAAACTGAAGCAATGATAACTATAGATATCAACACAGGTGGTTTTATTGGTACA
AAAAACCTAGAAGAAACTATATTTAAGACAAATCTAGAAGCTACTAAAGAAATAGCAAGACAATTAAGACTAAGAAATTT
AGGTGGTATTATAATTATAGATTTTATTGATATGATGGATCAATCTCATAGAATACAAGTTTTAGAGGCTCTAAAGAAAG
AATTAGAACTAGATAAGGCTAAGACTAGCGTAAGTGATATTTCTGAGCTAGGATTGGTTGAAATGACGCGTAAAAGGGTC
CATGAGAGTCTACTTAGAACTTTATGTCAGCCATGTGAACATTGTAGTGGCAAAGGAAGTGTCAAAACATTACAGACAAT
TTGTTATGATATTTTTAGAGAAATAAAATCTGAATCAAAAAATTATCCAAGTTATAATGATTTCTTATTAATTTCTTCTG
AAAAAATAATTGATTATATAGAAAAAGAAGAATCTATTTGGCTTGCAGAATTAGAATTAGAAATACAAAAAAATATTCAT
CTAAAAGTAGAAAATAGCCATATATATAACCAATACGATATAATTCCGTTAAATTAA

Upstream 100 bases:

>100_bases
AAGTTTATATATTAATAAGTAAAAGAAAATAAATTCAAAAACATAAAAAAAATTTTTTTCTCTATAATAAATGTTAATAA
AATAAAAATATTATTTTCTA

Downstream 100 bases:

>100_bases
AAAAATTTCTAAAACATTGTTGACAGCTTTAGAAAAAGAGCTATAATACATACTCATAGTCGCCGACTTAGCTCAATAGG
TAGAGCAACTGACTTGTAAT

Product: ribonuclease

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 498; Mature: 497

Protein sequence:

>498_residues
MSFNTEIFLNINKYEQRIAIKENNILKEILIERDNQKRIVGNIYKGKIIRVLPGMQAAFVDIGLEKAGFLHLSEVIPLEK
EDDDSDENFKLKKLNTEDINKWLREGQEVLVQVVKESIGNKGVKLTSHLSVSSRFLVFLPDLDHIGVSLKITNEQEKQRL
LESIKKITQSENPRGYILRTAAEGASYEELENDIKFLNNLWQDILDISSTIIKPGVVYEDFSLIIKTINIFANDNLDKIL
VDNIDSYKEICHFADKYIPGLREKIELYQKHNIFEEYDIENEINKALDKTVYLKSGGYLVIEQTEAMITIDINTGGFIGT
KNLEETIFKTNLEATKEIARQLRLRNLGGIIIIDFIDMMDQSHRIQVLEALKKELELDKAKTSVSDISELGLVEMTRKRV
HESLLRTLCQPCEHCSGKGSVKTLQTICYDIFREIKSESKNYPSYNDFLLISSEKIIDYIEKEESIWLAELELEIQKNIH
LKVENSHIYNQYDIIPLN

Sequences:

>Translated_498_residues
MSFNTEIFLNINKYEQRIAIKENNILKEILIERDNQKRIVGNIYKGKIIRVLPGMQAAFVDIGLEKAGFLHLSEVIPLEK
EDDDSDENFKLKKLNTEDINKWLREGQEVLVQVVKESIGNKGVKLTSHLSVSSRFLVFLPDLDHIGVSLKITNEQEKQRL
LESIKKITQSENPRGYILRTAAEGASYEELENDIKFLNNLWQDILDISSTIIKPGVVYEDFSLIIKTINIFANDNLDKIL
VDNIDSYKEICHFADKYIPGLREKIELYQKHNIFEEYDIENEINKALDKTVYLKSGGYLVIEQTEAMITIDINTGGFIGT
KNLEETIFKTNLEATKEIARQLRLRNLGGIIIIDFIDMMDQSHRIQVLEALKKELELDKAKTSVSDISELGLVEMTRKRV
HESLLRTLCQPCEHCSGKGSVKTLQTICYDIFREIKSESKNYPSYNDFLLISSEKIIDYIEKEESIWLAELELEIQKNIH
LKVENSHIYNQYDIIPLN
>Mature_497_residues
SFNTEIFLNINKYEQRIAIKENNILKEILIERDNQKRIVGNIYKGKIIRVLPGMQAAFVDIGLEKAGFLHLSEVIPLEKE
DDDSDENFKLKKLNTEDINKWLREGQEVLVQVVKESIGNKGVKLTSHLSVSSRFLVFLPDLDHIGVSLKITNEQEKQRLL
ESIKKITQSENPRGYILRTAAEGASYEELENDIKFLNNLWQDILDISSTIIKPGVVYEDFSLIIKTINIFANDNLDKILV
DNIDSYKEICHFADKYIPGLREKIELYQKHNIFEEYDIENEINKALDKTVYLKSGGYLVIEQTEAMITIDINTGGFIGTK
NLEETIFKTNLEATKEIARQLRLRNLGGIIIIDFIDMMDQSHRIQVLEALKKELELDKAKTSVSDISELGLVEMTRKRVH
ESLLRTLCQPCEHCSGKGSVKTLQTICYDIFREIKSESKNYPSYNDFLLISSEKIIDYIEKEESIWLAELELEIQKNIHL
KVENSHIYNQYDIIPLN

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=494, Percent_Identity=45.1417004048583, Blast_Score=422, Evalue=1e-119,
Organism=Escherichia coli, GI1787325, Length=446, Percent_Identity=35.6502242152466, Blast_Score=264, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 57495; Mature: 57364

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFNTEIFLNINKYEQRIAIKENNILKEILIERDNQKRIVGNIYKGKIIRVLPGMQAAFV
CCCCCEEEEEECHHHHEEEECCCHHHHHHHHCCCCCCCCEEECCCCEEEEECCCCHHHHH
DIGLEKAGFLHLSEVIPLEKEDDDSDENFKLKKLNTEDINKWLREGQEVLVQVVKESIGN
HCCCCCCCCEEHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC
KGVKLTSHLSVSSRFLVFLPDLDHIGVSLKITNEQEKQRLLESIKKITQSENPRGYILRT
CCCEEEEEECCCCCEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEE
AAEGASYEELENDIKFLNNLWQDILDISSTIIKPGVVYEDFSLIIKTINIFANDNLDKIL
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHH
VDNIDSYKEICHFADKYIPGLREKIELYQKHNIFEEYDIENEINKALDKTVYLKSGGYLV
HCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCHHHHHHHHCCEEEEECCCEEE
IEQTEAMITIDINTGGFIGTKNLEETIFKTNLEATKEIARQLRLRNLGGIIIIDFIDMMD
EEECCEEEEEEECCCCEEECCCHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHC
QSHRIQVLEALKKELELDKAKTSVSDISELGLVEMTRKRVHESLLRTLCQPCEHCSGKGS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VKTLQTICYDIFREIKSESKNYPSYNDFLLISSEKIIDYIEKEESIWLAELELEIQKNIH
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHCCCCEEEEEEEEEEECCEE
LKVENSHIYNQYDIIPLN
EEEECCEEECEEEEEECC
>Mature Secondary Structure 
SFNTEIFLNINKYEQRIAIKENNILKEILIERDNQKRIVGNIYKGKIIRVLPGMQAAFV
CCCCEEEEEECHHHHEEEECCCHHHHHHHHCCCCCCCCEEECCCCEEEEECCCCHHHHH
DIGLEKAGFLHLSEVIPLEKEDDDSDENFKLKKLNTEDINKWLREGQEVLVQVVKESIGN
HCCCCCCCCEEHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC
KGVKLTSHLSVSSRFLVFLPDLDHIGVSLKITNEQEKQRLLESIKKITQSENPRGYILRT
CCCEEEEEECCCCCEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEE
AAEGASYEELENDIKFLNNLWQDILDISSTIIKPGVVYEDFSLIIKTINIFANDNLDKIL
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHH
VDNIDSYKEICHFADKYIPGLREKIELYQKHNIFEEYDIENEINKALDKTVYLKSGGYLV
HCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCHHHHHHHHCCEEEEECCCEEE
IEQTEAMITIDINTGGFIGTKNLEETIFKTNLEATKEIARQLRLRNLGGIIIIDFIDMMD
EEECCEEEEEEECCCCEEECCCHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHC
QSHRIQVLEALKKELELDKAKTSVSDISELGLVEMTRKRVHESLLRTLCQPCEHCSGKGS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VKTLQTICYDIFREIKSESKNYPSYNDFLLISSEKIIDYIEKEESIWLAELELEIQKNIH
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHCCCCEEEEEEEEEEECCEE
LKVENSHIYNQYDIIPLN
EEEECCEEECEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]