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The map label for this gene is yggA [H]

Identifier: 134302788

GI number: 134302788

Start: 1881469

End: 1882080

Strand: Reverse

Name: yggA [H]

Synonym: FTW_2009

Alternate gene names: 134302788

Gene position: 1882080-1881469 (Counterclockwise)

Preceding gene: 134302791

Following gene: 134302786

Centisome position: 99.14

GC content: 29.08

Gene sequence:

>612_bases
ATGGCATTCATATCTGGATTTAGTTTAGCTTTATCATTAATTTTAGGGATAGGAGCACAAAATATTTTTGTACTAAAGCA
AGCCATCAAAAGGAATTATGCTATTAGCACAGCGGTTATATGTTTTTTTTGTGATGTTATATTGATATTCTTTAGTGTTG
TTCTAACTACAACTATGGTACGATATCTTGCTGTTGTAAGACCTATAATGCTTATTTTTGCAGTTTTGTTTTTAGTTTAT
TATGGAATATTTTCAATAAAATCTTCTTTTACAGAAAATAAGATACTAGATGAGAGTTTTCATCAGCAAAACTTTTTTAA
AGTACTTATTTTAAGTATGTCTTTTAGCTTACTTAATCCTCAAGCTATCTTGGATATTGTTGTTCTTTTGGGGGGAGTAG
CTACTACTTATAGTGAAAATATATTAAAAATAGAGTTTATGCTTGGAGCTGGTGTTGCAAGTTTAGTTTGGTTTGTATCA
TTGATGTTATCAGGTCTTTTTCTAAGGAAGTTTATCCAAAAAATAATTGTTTGGCAGTGGATAGAGCGCCTTACGGGAGT
TCTGATGTTTGTAATTGCTATTAATTGTATTAGATTACTAATTAATTTTTAA

Upstream 100 bases:

>100_bases
TTAATTTAACTAATGTATTATTATAATTATTAATTATACTAATTATTGATTGTTTGCTAAATTTTTATTTCATCAAATAT
TTTAAAATAAGAGAATAATA

Downstream 100 bases:

>100_bases
CCAAGTCTAATAGTTCTCTAAATTTATAGTCTCACCAATTTTTAAAATTAGAGCATTTTCTTGACCATATTTTTGATCTT
TTGCAGCTTGTTTGAATCTT

Product: LysE family translocator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MAFISGFSLALSLILGIGAQNIFVLKQAIKRNYAISTAVICFFCDVILIFFSVVLTTTMVRYLAVVRPIMLIFAVLFLVY
YGIFSIKSSFTENKILDESFHQQNFFKVLILSMSFSLLNPQAILDIVVLLGGVATTYSENILKIEFMLGAGVASLVWFVS
LMLSGLFLRKFIQKIIVWQWIERLTGVLMFVIAINCIRLLINF

Sequences:

>Translated_203_residues
MAFISGFSLALSLILGIGAQNIFVLKQAIKRNYAISTAVICFFCDVILIFFSVVLTTTMVRYLAVVRPIMLIFAVLFLVY
YGIFSIKSSFTENKILDESFHQQNFFKVLILSMSFSLLNPQAILDIVVLLGGVATTYSENILKIEFMLGAGVASLVWFVS
LMLSGLFLRKFIQKIIVWQWIERLTGVLMFVIAINCIRLLINF
>Mature_202_residues
AFISGFSLALSLILGIGAQNIFVLKQAIKRNYAISTAVICFFCDVILIFFSVVLTTTMVRYLAVVRPIMLIFAVLFLVYY
GIFSIKSSFTENKILDESFHQQNFFKVLILSMSFSLLNPQAILDIVVLLGGVATTYSENILKIEFMLGAGVASLVWFVSL
MLSGLFLRKFIQKIIVWQWIERLTGVLMFVIAINCIRLLINF

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=157, Percent_Identity=28.0254777070064, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22935; Mature: 22804

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFISGFSLALSLILGIGAQNIFVLKQAIKRNYAISTAVICFFCDVILIFFSVVLTTTMV
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYLAVVRPIMLIFAVLFLVYYGIFSIKSSFTENKILDESFHQQNFFKVLILSMSFSLLNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
QAILDIVVLLGGVATTYSENILKIEFMLGAGVASLVWFVSLMLSGLFLRKFIQKIIVWQW
HHHHHHHHHHHHHHHHHHCCHHEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IERLTGVLMFVIAINCIRLLINF
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AFISGFSLALSLILGIGAQNIFVLKQAIKRNYAISTAVICFFCDVILIFFSVVLTTTMV
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYLAVVRPIMLIFAVLFLVYYGIFSIKSSFTENKILDESFHQQNFFKVLILSMSFSLLNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
QAILDIVVLLGGVATTYSENILKIEFMLGAGVASLVWFVSLMLSGLFLRKFIQKIIVWQW
HHHHHHHHHHHHHHHHHHCCHHEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IERLTGVLMFVIAINCIRLLINF
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]