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The map label for this gene is blc [H]

Identifier: 134302694

GI number: 134302694

Start: 1774558

End: 1775076

Strand: Reverse

Name: blc [H]

Synonym: FTW_1893

Alternate gene names: 134302694

Gene position: 1775076-1774558 (Counterclockwise)

Preceding gene: 134302700

Following gene: 134302693

Centisome position: 93.5

GC content: 32.37

Gene sequence:

>519_bases
ATGAAAAAGTTAGTTTTAATAATCTTAACAACAGCATTTATATTGCTATCAGGTTGTGTAACCAAACCAGCAAATATAAA
TCCTGTCGAAAACTTTCAAGCGGATAAGTATCTTGGCAAATGGTATGAGATAGCAAGATTTGATAATAGTTTTGAAAAAG
GTATGACAAATGTTTATGCTGAATATAGTTTAAATCCAGATGGAACTATAAAGGTAATAAATAGTGGCATCACACCATCA
ACTGGTAAGAGAAGTTATGCTACGGGAATTGCTAAGTTTGTTGAAGATAAAAATATTGGCTACCTTAAAGTATCTTTCTT
TAGACCTTTCTATGGTGCGTATGTAGTATTTAAGCTTGATGATAATTATAAATATGCTTATGTGGCGGGTGCGGATAAGG
ATTATTTATGGCTACTTGCGCGAACAAAAACAGTACCACAAAATATCAAAGATGACTTTATCAATCGAGCTAAAGCTTTA
GGTTATGATACTGATAAATTAGTCTGGGTTAAGCAGTAA

Upstream 100 bases:

>100_bases
ATAACTTAATTCCATAATATTAAAACTTTTAGCTATTGTTATATATCACAGTTAGTTTACTATACTGTTTAGCATATAAG
AAATCAAAAGAGGTTTAATT

Downstream 100 bases:

>100_bases
AATATACTTTGGCTATCTAAGCAGTATACTTGCTTCAAAAAATCCAATCTTATTATGCGAAAATGCATATCTATTATGTA
ATTCTGTTTATTGTAAAAAT

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: Protein vlp [H]

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKKLVLIILTTAFILLSGCVTKPANINPVENFQADKYLGKWYEIARFDNSFEKGMTNVYAEYSLNPDGTIKVINSGITPS
TGKRSYATGIAKFVEDKNIGYLKVSFFRPFYGAYVVFKLDDNYKYAYVAGADKDYLWLLARTKTVPQNIKDDFINRAKAL
GYDTDKLVWVKQ

Sequences:

>Translated_172_residues
MKKLVLIILTTAFILLSGCVTKPANINPVENFQADKYLGKWYEIARFDNSFEKGMTNVYAEYSLNPDGTIKVINSGITPS
TGKRSYATGIAKFVEDKNIGYLKVSFFRPFYGAYVVFKLDDNYKYAYVAGADKDYLWLLARTKTVPQNIKDDFINRAKAL
GYDTDKLVWVKQ
>Mature_172_residues
MKKLVLIILTTAFILLSGCVTKPANINPVENFQADKYLGKWYEIARFDNSFEKGMTNVYAEYSLNPDGTIKVINSGITPS
TGKRSYATGIAKFVEDKNIGYLKVSFFRPFYGAYVVFKLDDNYKYAYVAGADKDYLWLLARTKTVPQNIKDDFINRAKAL
GYDTDKLVWVKQ

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Escherichia coli, GI1790592, Length=174, Percent_Identity=44.8275862068966, Blast_Score=156, Evalue=7e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 19576; Mature: 19576

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLVLIILTTAFILLSGCVTKPANINPVENFQADKYLGKWYEIARFDNSFEKGMTNVYA
CCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCEEEE
EYSLNPDGTIKVINSGITPSTGKRSYATGIAKFVEDKNIGYLKVSFFRPFYGAYVVFKLD
EEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEC
DNYKYAYVAGADKDYLWLLARTKTVPQNIKDDFINRAKALGYDTDKLVWVKQ
CCEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEC
>Mature Secondary Structure
MKKLVLIILTTAFILLSGCVTKPANINPVENFQADKYLGKWYEIARFDNSFEKGMTNVYA
CCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCEEEE
EYSLNPDGTIKVINSGITPSTGKRSYATGIAKFVEDKNIGYLKVSFFRPFYGAYVVFKLD
EEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEC
DNYKYAYVAGADKDYLWLLARTKTVPQNIKDDFINRAKALGYDTDKLVWVKQ
CCEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8514410; 10952301 [H]