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The map label for this gene is wrbA [H]

Identifier: 134302684

GI number: 134302684

Start: 1761184

End: 1761780

Strand: Direct

Name: wrbA [H]

Synonym: FTW_1875

Alternate gene names: 134302684

Gene position: 1761184-1761780 (Clockwise)

Preceding gene: 134302679

Following gene: 134302685

Centisome position: 92.77

GC content: 39.7

Gene sequence:

>597_bases
ATGATGATGAAAAACATACTAATACTATACTACAGCCAAGGTGGAAGTACAAAGAAAATGGCACATACTATAGCCATTGG
AGTTGAAGCCACAGGAGCAACAGCAACTATCCGTACGGTACCAAATATTTCAGCGAAAACTGAACAAACAGCGCCTTTAA
TCCCAGATAATGGCGATCTGTATGCAACAAAAGAAGATTTAGCTAATTGTGATGGTCTAATAGTCGGAAGCCCGGCATAT
TTTGGTAATATGGCATCGCCACTTAAGTACTTTTTAGAGATACATAGTGATATATGGTTTAAAGGTAGCTTAATCGGTAA
GCCAGTAGGTTTTTTCACTGCTGCATCAGGAATGCATGCCGGTCATGAAAGCACCTTATTATCAATGATGATCCCTTTTA
TTCATCATGGTTGCTTGATAGTTGGGGTACCATATAGTGAGCAAGCCCTAGAACATACTCGTACAGGCGGCACTCCATAT
GGAGCCTCACATTTAAACACATTCTCACCGAATAAGACCATGTCTGATGATGAGATAAAGATATGCAAAACACTAGGCAA
ACGCGTTGCTGAAATAGCTAATAAATTATCTTGCTAG

Upstream 100 bases:

>100_bases
TTGGACAGTCTTTACGGAGATATTCTTTAAAAACCCAGATCCAATAGTTTTTTAATATTAGCAAATATTTTTTGTATAAT
CTGATATCAAACATAGAATA

Downstream 100 bases:

>100_bases
GAGAATATAAATGAAGAAGGTTTTTTGGATTTGGCTATTATCATTATGCTTCTTATTAACAAACTGTACTAATTCCGCAC
CAAGCTATTCAGCTAATTCT

Product: flavodoxin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MMMKNILILYYSQGGSTKKMAHTIAIGVEATGATATIRTVPNISAKTEQTAPLIPDNGDLYATKEDLANCDGLIVGSPAY
FGNMASPLKYFLEIHSDIWFKGSLIGKPVGFFTAASGMHAGHESTLLSMMIPFIHHGCLIVGVPYSEQALEHTRTGGTPY
GASHLNTFSPNKTMSDDEIKICKTLGKRVAEIANKLSC

Sequences:

>Translated_198_residues
MMMKNILILYYSQGGSTKKMAHTIAIGVEATGATATIRTVPNISAKTEQTAPLIPDNGDLYATKEDLANCDGLIVGSPAY
FGNMASPLKYFLEIHSDIWFKGSLIGKPVGFFTAASGMHAGHESTLLSMMIPFIHHGCLIVGVPYSEQALEHTRTGGTPY
GASHLNTFSPNKTMSDDEIKICKTLGKRVAEIANKLSC
>Mature_198_residues
MMMKNILILYYSQGGSTKKMAHTIAIGVEATGATATIRTVPNISAKTEQTAPLIPDNGDLYATKEDLANCDGLIVGSPAY
FGNMASPLKYFLEIHSDIWFKGSLIGKPVGFFTAASGMHAGHESTLLSMMIPFIHHGCLIVGVPYSEQALEHTRTGGTPY
GASHLNTFSPNKTMSDDEIKICKTLGKRVAEIANKLSC

Specific function: Seems To Enhance The Formation And/Or Stability Of Noncovalent Complexes Between The Trp Repressor Protein And Operator-Bearing DNA. However, Wrba Does Not Specifically Influence The Affinity Or Mode Of Binding Of Trpr To Its Operator. It Seems Possible T

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787239, Length=207, Percent_Identity=33.3333333333333, Blast_Score=107, Evalue=6e-25,
Organism=Saccharomyces cerevisiae, GI6319849, Length=202, Percent_Identity=32.6732673267327, Blast_Score=91, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6320235, Length=199, Percent_Identity=27.6381909547739, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6319526, Length=201, Percent_Identity=28.3582089552239, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008254
- InterPro:   IPR010089
- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 21255; Mature: 21255

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMKNILILYYSQGGSTKKMAHTIAIGVEATGATATIRTVPNISAKTEQTAPLIPDNGDL
CCCCCEEEEEECCCCCCHHHEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCE
YATKEDLANCDGLIVGSPAYFGNMASPLKYFLEIHSDIWFKGSLIGKPVGFFTAASGMHA
EECHHHHCCCCEEEEECCHHHCCHHHHHHHHHHHHHCCEEECCCCCCCCHHHEECCCCCC
GHESTLLSMMIPFIHHGCLIVGVPYSEQALEHTRTGGTPYGASHLNTFSPNKTMSDDEIK
CHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
ICKTLGKRVAEIANKLSC
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMMKNILILYYSQGGSTKKMAHTIAIGVEATGATATIRTVPNISAKTEQTAPLIPDNGDL
CCCCCEEEEEECCCCCCHHHEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCE
YATKEDLANCDGLIVGSPAYFGNMASPLKYFLEIHSDIWFKGSLIGKPVGFFTAASGMHA
EECHHHHCCCCEEEEECCHHHCCHHHHHHHHHHHHHCCEEECCCCCCCCHHHEECCCCCC
GHESTLLSMMIPFIHHGCLIVGVPYSEQALEHTRTGGTPYGASHLNTFSPNKTMSDDEIK
CHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
ICKTLGKRVAEIANKLSC
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA