| Definition | Francisella tularensis subsp. tularensis WY96-3418, complete genome. |
|---|---|
| Accession | NC_009257 |
| Length | 1,898,476 |
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The map label for this gene is ppdK [H]
Identifier: 134302676
GI number: 134302676
Start: 1750931
End: 1753564
Strand: Direct
Name: ppdK [H]
Synonym: FTW_1867
Alternate gene names: 134302676
Gene position: 1750931-1753564 (Clockwise)
Preceding gene: 134302675
Following gene: 134302677
Centisome position: 92.23
GC content: 37.21
Gene sequence:
>2634_bases ATGTCGAAGTTTGTCTATGCCTTTAGCGAAGGTAATAAGTCTATGCGTGATTTACTAGGTGGAAAAGGTGCAAATCTTAG TGAAATGCTAAATAGTGGTCTACCTGTGCCAGATGGATTTACCGTAACTACAGAAGCATGTCTTAAGTATTATGATGATC GCCAAAAGTTAAGTAATGAAGTTAAAGAACAAATATTTGCTCATATCAAAGATTTAGAGAAAAGAACTGGTAAAACTTTT GGTGGTGGCAATAATCCTCTACTAGTATCAGTACGCTCTGGTGCAAGAGTTTCTATGCCTGGGATGATGGATACTGTCCT TAATTTAGGACTAAATGATACTGTTGCTCAAGCTATGGTAGCAAAGACAAACAATGAGCAATTTGTTTATGATAGCTATA GAAGATTCATAATGATGTTTGCAGATGTTGTTATGGATTGTGAGAAGAAACCTTTTGATAAAGTTTTAGAAGATAAAAAA GCTAAAAGAAAGGTAAAAAATGATTGTGATTTACCAGCTCAAGATTATAAAGATATAGTTACAGAATATAAGAAAATTTA TAAAGATTTAGTCGGTAAGGACTTCCCTACTGATCCAATTGAGCAACTTCTGGCTGCTGTAGAAGCCGTTTTTAAATCAT GGAATGCCGAGAGAGCAATCATCTATAGAGAGATAAATAATATTTCAAATAACTGGGGTACAGCTGTTAATGTCCAAGAA ATGGTCTATGGTAACTCTGGTAATAATTCTGGGACAGGAGTAGCATTTACTAGAAACCCATCGACTGGTGAAAATGAGCT TTTTGGTGAATATCTAATTAATGCGCAGGGAGAAGATGTTGTAGCTGGTATCAGAACCCCAGCGCATATCTCAACTTTAA AAGATAAAATGCCAGAAGTATTTAATGACTTTGTGAAGATTGCTAAAAACTTAGAAAAAGTTTACAAAGACATGCAAGAT ATGGAGTTTACTATCGAAGATGGTAAGCTTTTCATGCTACAAACAAGAAATGGTAAAAGAACTGCAAAAGCAGCTTTGAA AATAGCAGTTGATATGGCTAAAGAAGGCTTAATCACAAATGAAGAAGCTGTAATGATGGTAGAGCCTCATTTATTAGAGC AACTACTACATCCTAAATTTGATGAGAAAGCTCTAGCTTCTAAACGCCCTCTTGGTTCAGCTCTAGGTGCGTCTCCAGGC GCTGCTAGTGGTAGAATATACTTTGATGTTGAATCACTACTTGCAGCAAAAGCACGTGGTGAAGAAAAAACTATTCTTGT TAGGATTGAAACCTCTCCTGAAGATATCGCGGGGATGAATGCTTGTAATGGTATCTTAACTCTACGTGGTGGTATGACAT CTCATGCTGCTGTTGTTGCTCGTGGTATGGGTAAATGTTGTGTGTCTGGTTTAGAATCAGCAAGAATTGATGAAGAAAAG AAAACTATCACATTTGAGAGGGGCCAAGTATTTACAGAAGGTGATTATTTATCTCTTGATGGTACCAAAGGTACTGTCTA TAGAGGTATTATTAAAACTGTAGATCCTGAAGTTACTAAAGATTTTGAAGACTTTATGAAGTTCGTCGATAGTGTACGTA AACTTCGTGTTAGATGTAATGCCGATACTTATAAAGATGCCTCAATTGCAAGAGCATTTGGCGCGGAAGGTATTGGTTTA TGTCGTACTGAGCATATGTTCTTTGAGGAAGATCGTATCTCTTATGTTAGACAGATGATCCTAGCTAAAGATAAAAAAGA AAGACAAAGAGCTTTAGATAAACTACTTCCTGTACAGCAACAAGATTTTGAAGAGCTTTTTGAAGCGATGGATAATCTAG CTGTAACGATTAGATTTATCGATCCGCCTTTACATGAGTTTTTACCTCACGAGGTGGATGAGATTGATGATCTAGCTCGT GAGTTTAATATTAGCTATAGTGAACTAGAAGCACGTATTGAAGCACTTAGCGAAGTAAACCCTATGATGGGTCATCGCGG CTGTAGACTTGCTGTAACGTATCCTGAAATCATTGAGATGCAAACTAAAGCTATCATCTATGCAGCGATATCAAGTAAAC GTATGGGTATAGAAGTTAAGCCAGAGCTTATGATTCCTCTAGTTAGTACTCTTGGTGAGTTTAAACTCTTAAGTGGTATT GTCAGAGAAGTTGCAGACACTATCCTAAAGCGTGAAAAAATTGATATTGATTACAAAGTTGGGGTAATGCTTGAAACTCC ACGTGGTGCTATCGGCGCTGGTATGCTTGCAGCTGCTGGTAGTGAATTTTTCTCATTTGGTACAAATGATTTGACTCAGA TGACTTTTGGTTTCAGTAGAGATGATGCTAATAAGTTTATTAAAGACTATCTTGAAAAAGGCATACTAAGCTTTGATCCA TTTGCTAGGCTAGATATTAAAGGTGTTGGTAAACTAATGCAAATAGCCAAAGAAGGCGTCAAGGCTGTTAATCCTAATGC TAAGATGGGTATATGTGGCGAGCATGGTGGCGAACCGTATTCTGTTGGTTTCTGTCATGATTTGGATCTTGACTATGTAT CTTGCTCTCCTTTTAGAGTTCCTATCGCAAGATTAGCGGCTGCTCAAGCTAAAATATATGCAGACCGGAGATAA
Upstream 100 bases:
>100_bases CTTTAATATATCTATCAAAATGTGATAGGATAAGACTCAAGTACGCTTGAGAGTGTACTGTTTTCAAATTAATTTATAAA AAAACTTGAGAGGAGTTTTT
Downstream 100 bases:
>100_bases TAATCATTTCTATTGTTTAATCTCTTGATTTTAAAAAATCATTAATACGCTATAATCTAGGTTTACACTAAAATATTATA TAGCTACAATAACTATATCT
Product: pyruvate phosphate dikinase
Products: NA
Alternate protein names: Pyruvate, orthophosphate dikinase [H]
Number of amino acids: Translated: 877; Mature: 876
Protein sequence:
>877_residues MSKFVYAFSEGNKSMRDLLGGKGANLSEMLNSGLPVPDGFTVTTEACLKYYDDRQKLSNEVKEQIFAHIKDLEKRTGKTF GGGNNPLLVSVRSGARVSMPGMMDTVLNLGLNDTVAQAMVAKTNNEQFVYDSYRRFIMMFADVVMDCEKKPFDKVLEDKK AKRKVKNDCDLPAQDYKDIVTEYKKIYKDLVGKDFPTDPIEQLLAAVEAVFKSWNAERAIIYREINNISNNWGTAVNVQE MVYGNSGNNSGTGVAFTRNPSTGENELFGEYLINAQGEDVVAGIRTPAHISTLKDKMPEVFNDFVKIAKNLEKVYKDMQD MEFTIEDGKLFMLQTRNGKRTAKAALKIAVDMAKEGLITNEEAVMMVEPHLLEQLLHPKFDEKALASKRPLGSALGASPG AASGRIYFDVESLLAAKARGEEKTILVRIETSPEDIAGMNACNGILTLRGGMTSHAAVVARGMGKCCVSGLESARIDEEK KTITFERGQVFTEGDYLSLDGTKGTVYRGIIKTVDPEVTKDFEDFMKFVDSVRKLRVRCNADTYKDASIARAFGAEGIGL CRTEHMFFEEDRISYVRQMILAKDKKERQRALDKLLPVQQQDFEELFEAMDNLAVTIRFIDPPLHEFLPHEVDEIDDLAR EFNISYSELEARIEALSEVNPMMGHRGCRLAVTYPEIIEMQTKAIIYAAISSKRMGIEVKPELMIPLVSTLGEFKLLSGI VREVADTILKREKIDIDYKVGVMLETPRGAIGAGMLAAAGSEFFSFGTNDLTQMTFGFSRDDANKFIKDYLEKGILSFDP FARLDIKGVGKLMQIAKEGVKAVNPNAKMGICGEHGGEPYSVGFCHDLDLDYVSCSPFRVPIARLAAAQAKIYADRR
Sequences:
>Translated_877_residues MSKFVYAFSEGNKSMRDLLGGKGANLSEMLNSGLPVPDGFTVTTEACLKYYDDRQKLSNEVKEQIFAHIKDLEKRTGKTF GGGNNPLLVSVRSGARVSMPGMMDTVLNLGLNDTVAQAMVAKTNNEQFVYDSYRRFIMMFADVVMDCEKKPFDKVLEDKK AKRKVKNDCDLPAQDYKDIVTEYKKIYKDLVGKDFPTDPIEQLLAAVEAVFKSWNAERAIIYREINNISNNWGTAVNVQE MVYGNSGNNSGTGVAFTRNPSTGENELFGEYLINAQGEDVVAGIRTPAHISTLKDKMPEVFNDFVKIAKNLEKVYKDMQD MEFTIEDGKLFMLQTRNGKRTAKAALKIAVDMAKEGLITNEEAVMMVEPHLLEQLLHPKFDEKALASKRPLGSALGASPG AASGRIYFDVESLLAAKARGEEKTILVRIETSPEDIAGMNACNGILTLRGGMTSHAAVVARGMGKCCVSGLESARIDEEK KTITFERGQVFTEGDYLSLDGTKGTVYRGIIKTVDPEVTKDFEDFMKFVDSVRKLRVRCNADTYKDASIARAFGAEGIGL CRTEHMFFEEDRISYVRQMILAKDKKERQRALDKLLPVQQQDFEELFEAMDNLAVTIRFIDPPLHEFLPHEVDEIDDLAR EFNISYSELEARIEALSEVNPMMGHRGCRLAVTYPEIIEMQTKAIIYAAISSKRMGIEVKPELMIPLVSTLGEFKLLSGI VREVADTILKREKIDIDYKVGVMLETPRGAIGAGMLAAAGSEFFSFGTNDLTQMTFGFSRDDANKFIKDYLEKGILSFDP FARLDIKGVGKLMQIAKEGVKAVNPNAKMGICGEHGGEPYSVGFCHDLDLDYVSCSPFRVPIARLAAAQAKIYADRR >Mature_876_residues SKFVYAFSEGNKSMRDLLGGKGANLSEMLNSGLPVPDGFTVTTEACLKYYDDRQKLSNEVKEQIFAHIKDLEKRTGKTFG GGNNPLLVSVRSGARVSMPGMMDTVLNLGLNDTVAQAMVAKTNNEQFVYDSYRRFIMMFADVVMDCEKKPFDKVLEDKKA KRKVKNDCDLPAQDYKDIVTEYKKIYKDLVGKDFPTDPIEQLLAAVEAVFKSWNAERAIIYREINNISNNWGTAVNVQEM VYGNSGNNSGTGVAFTRNPSTGENELFGEYLINAQGEDVVAGIRTPAHISTLKDKMPEVFNDFVKIAKNLEKVYKDMQDM EFTIEDGKLFMLQTRNGKRTAKAALKIAVDMAKEGLITNEEAVMMVEPHLLEQLLHPKFDEKALASKRPLGSALGASPGA ASGRIYFDVESLLAAKARGEEKTILVRIETSPEDIAGMNACNGILTLRGGMTSHAAVVARGMGKCCVSGLESARIDEEKK TITFERGQVFTEGDYLSLDGTKGTVYRGIIKTVDPEVTKDFEDFMKFVDSVRKLRVRCNADTYKDASIARAFGAEGIGLC RTEHMFFEEDRISYVRQMILAKDKKERQRALDKLLPVQQQDFEELFEAMDNLAVTIRFIDPPLHEFLPHEVDEIDDLARE FNISYSELEARIEALSEVNPMMGHRGCRLAVTYPEIIEMQTKAIIYAAISSKRMGIEVKPELMIPLVSTLGEFKLLSGIV REVADTILKREKIDIDYKVGVMLETPRGAIGAGMLAAAGSEFFSFGTNDLTQMTFGFSRDDANKFIKDYLEKGILSFDPF ARLDIKGVGKLMQIAKEGVKAVNPNAKMGICGEHGGEPYSVGFCHDLDLDYVSCSPFRVPIARLAAAQAKIYADRR
Specific function: Catalyzes the reversible phosphorylation of pyruvate and phosphate. In E.histolytica and C.symbiosus, PPDK functions in the direction of ATP synthesis [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1788756, Length=462, Percent_Identity=25.5411255411255, Blast_Score=102, Evalue=2e-22, Organism=Escherichia coli, GI1789193, Length=449, Percent_Identity=22.9398663697105, Blast_Score=77, Evalue=7e-15, Organism=Escherichia coli, GI48994992, Length=453, Percent_Identity=23.6203090507726, Blast_Score=74, Evalue=4e-14,
Paralogues:
None
Copy number: 360 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2659 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 4,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR010121 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.1 [H]
Molecular weight: Translated: 97596; Mature: 97465
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFVYAFSEGNKSMRDLLGGKGANLSEMLNSGLPVPDGFTVTTEACLKYYDDRQKLSNE CCCEEEEEECCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHH VKEQIFAHIKDLEKRTGKTFGGGNNPLLVSVRSGARVSMPGMMDTVLNLGLNDTVAQAMV HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEECCHHHHHHHHCCCCHHHHHHHH AKTNNEQFVYDSYRRFIMMFADVVMDCEKKPFDKVLEDKKAKRKVKNDCDLPAQDYKDIV HCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TEYKKIYKDLVGKDFPTDPIEQLLAAVEAVFKSWNAERAIIYREINNISNNWGTAVNVQE HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCCCCCEEEHHH MVYGNSGNNSGTGVAFTRNPSTGENELFGEYLINAQGEDVVAGIRTPAHISTLKDKMPEV HHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHH FNDFVKIAKNLEKVYKDMQDMEFTIEDGKLFMLQTRNGKRTAKAALKIAVDMAKEGLITN HHHHHHHHHHHHHHHHHHHHCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCC EEAVMMVEPHLLEQLLHPKFDEKALASKRPLGSALGASPGAASGRIYFDVESLLAAKARG CCEEEEECHHHHHHHHCCCCCHHHHHHCCCCCHHHCCCCCCCCCEEEEEHHHHHHHHCCC EEKTILVRIETSPEDIAGMNACNGILTLRGGMTSHAAVVARGMGKCCVSGLESARIDEEK CCCEEEEEEECCCHHHCCCHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH KTITFERGQVFTEGDYLSLDGTKGTVYRGIIKTVDPEVTKDFEDFMKFVDSVRKLRVRCN HEEEEECCEEEECCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC ADTYKDASIARAFGAEGIGLCRTEHMFFEEDRISYVRQMILAKDKKERQRALDKLLPVQQ CCCCCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCH QDFEELFEAMDNLAVTIRFIDPPLHEFLPHEVDEIDDLAREFNISYSELEARIEALSEVN HHHHHHHHHHCCEEEEEEEECCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC PMMGHRGCRLAVTYPEIIEMQTKAIIYAAISSKRMGIEVKPELMIPLVSTLGEFKLLSGI HHHCCCCCEEEEECHHHHHHHHHHEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHH VREVADTILKREKIDIDYKVGVMLETPRGAIGAGMLAAAGSEFFSFGTNDLTQMTFGFSR HHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHCCCHHHHCCCCCHHHHHCCCCC DDANKFIKDYLEKGILSFDPFARLDIKGVGKLMQIAKEGVKAVNPNAKMGICGEHGGEPY CHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEE SVGFCHDLDLDYVSCSPFRVPIARLAAAQAKIYADRR EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SKFVYAFSEGNKSMRDLLGGKGANLSEMLNSGLPVPDGFTVTTEACLKYYDDRQKLSNE CCEEEEEECCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHH VKEQIFAHIKDLEKRTGKTFGGGNNPLLVSVRSGARVSMPGMMDTVLNLGLNDTVAQAMV HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEECCHHHHHHHHCCCCHHHHHHHH AKTNNEQFVYDSYRRFIMMFADVVMDCEKKPFDKVLEDKKAKRKVKNDCDLPAQDYKDIV HCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TEYKKIYKDLVGKDFPTDPIEQLLAAVEAVFKSWNAERAIIYREINNISNNWGTAVNVQE HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCCCCCEEEHHH MVYGNSGNNSGTGVAFTRNPSTGENELFGEYLINAQGEDVVAGIRTPAHISTLKDKMPEV HHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHH FNDFVKIAKNLEKVYKDMQDMEFTIEDGKLFMLQTRNGKRTAKAALKIAVDMAKEGLITN HHHHHHHHHHHHHHHHHHHHCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCC EEAVMMVEPHLLEQLLHPKFDEKALASKRPLGSALGASPGAASGRIYFDVESLLAAKARG CCEEEEECHHHHHHHHCCCCCHHHHHHCCCCCHHHCCCCCCCCCEEEEEHHHHHHHHCCC EEKTILVRIETSPEDIAGMNACNGILTLRGGMTSHAAVVARGMGKCCVSGLESARIDEEK CCCEEEEEEECCCHHHCCCHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH KTITFERGQVFTEGDYLSLDGTKGTVYRGIIKTVDPEVTKDFEDFMKFVDSVRKLRVRCN HEEEEECCEEEECCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC ADTYKDASIARAFGAEGIGLCRTEHMFFEEDRISYVRQMILAKDKKERQRALDKLLPVQQ CCCCCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCH QDFEELFEAMDNLAVTIRFIDPPLHEFLPHEVDEIDDLAREFNISYSELEARIEALSEVN HHHHHHHHHHCCEEEEEEEECCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC PMMGHRGCRLAVTYPEIIEMQTKAIIYAAISSKRMGIEVKPELMIPLVSTLGEFKLLSGI HHHCCCCCEEEEECHHHHHHHHHHEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHH VREVADTILKREKIDIDYKVGVMLETPRGAIGAGMLAAAGSEFFSFGTNDLTQMTFGFSR HHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHCCCHHHHCCCCCHHHHHCCCCC DDANKFIKDYLEKGILSFDPFARLDIKGVGKLMQIAKEGVKAVNPNAKMGICGEHGGEPY CHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEE SVGFCHDLDLDYVSCSPFRVPIARLAAAQAKIYADRR EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2176881; 6257292; 11695893; 11468288; 8610096; 9753432 [H]