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The map label for this gene is cyoD [H]

Identifier: 134302622

GI number: 134302622

Start: 1692088

End: 1692420

Strand: Reverse

Name: cyoD [H]

Synonym: FTW_1802

Alternate gene names: 134302622

Gene position: 1692420-1692088 (Counterclockwise)

Preceding gene: 134302623

Following gene: 134302621

Centisome position: 89.15

GC content: 35.44

Gene sequence:

>333_bases
ATGGCTAAAGAACACTTATACGATCATGATACAGGCGCTGCATACGGTACACATAAGAGCTATATACAAGGTTTTGTGCT
ATCTGTAGTTATTACTACTATAGCTTTTGTTTTAGTTGGATTTAAGCTTTTATCTCCTGTTGCTTTATGTGTGACTGTGG
CAGTATTAGCAGTAGTACAGCTTTTTGTACAGTTAGTGTTTTTCTTGCATCTAAGCACGGATTCAAAAGCACGTTGGAAC
TTGGTAAGTGCAATTTTTGCAATTATTGTAGTTGTAATTGTAGTTGCTGGTACTATGTGGATCATGTTTGACTTATATGA
CATGATGATGTAA

Upstream 100 bases:

>100_bases
GCTAAGACTAAACTTACTTATCTAGGCTTGTTCTGGCACTTCTTAGATATCGTATGGATATTTGTATTCTCAATAGTTTA
CTTATTAGGAGCAGTGTAAT

Downstream 100 bases:

>100_bases
TTCTCTTTTTTTAAAAATATTTTTCTTACTATGTATTTCAAAAGATATCTTCAATTAGCTAAGCCAGGTATTATTTTTGG
TAATCTTATTACTCTTACAG

Product: cytochrome o ubiquinol oxidase subunit IV

Products: NA

Alternate protein names: Ubiquinol oxidase chain D [H]

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MAKEHLYDHDTGAAYGTHKSYIQGFVLSVVITTIAFVLVGFKLLSPVALCVTVAVLAVVQLFVQLVFFLHLSTDSKARWN
LVSAIFAIIVVVIVVAGTMWIMFDLYDMMM

Sequences:

>Translated_110_residues
MAKEHLYDHDTGAAYGTHKSYIQGFVLSVVITTIAFVLVGFKLLSPVALCVTVAVLAVVQLFVQLVFFLHLSTDSKARWN
LVSAIFAIIVVVIVVAGTMWIMFDLYDMMM
>Mature_109_residues
AKEHLYDHDTGAAYGTHKSYIQGFVLSVVITTIAFVLVGFKLLSPVALCVTVAVLAVVQLFVQLVFFLHLSTDSKARWNL
VSAIFAIIVVVIVVAGTMWIMFDLYDMMM

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG3125

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 4

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit 4 family [H]

Homologues:

Organism=Escherichia coli, GI1786632, Length=108, Percent_Identity=41.6666666666667, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005171
- InterPro:   IPR014210 [H]

Pfam domain/function: PF03626 COX4_pro [H]

EC number: 1.10.3.-

Molecular weight: Translated: 12186; Mature: 12055

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEHLYDHDTGAAYGTHKSYIQGFVLSVVITTIAFVLVGFKLLSPVALCVTVAVLAVVQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFVQLVFFLHLSTDSKARWNLVSAIFAIIVVVIVVAGTMWIMFDLYDMMM
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
AKEHLYDHDTGAAYGTHKSYIQGFVLSVVITTIAFVLVGFKLLSPVALCVTVAVLAVVQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFVQLVFFLHLSTDSKARWNLVSAIFAIIVVVIVVAGTMWIMFDLYDMMM
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]