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The map label for this gene is glgB [H]

Identifier: 134302504

GI number: 134302504

Start: 1568248

End: 1570170

Strand: Direct

Name: glgB [H]

Synonym: FTW_1660

Alternate gene names: 134302504

Gene position: 1568248-1570170 (Clockwise)

Preceding gene: 134302493

Following gene: 134302505

Centisome position: 82.61

GC content: 34.74

Gene sequence:

>1923_bases
ATGAAAAATAAAAATTCAGAACAAAATACTCACTCTACTATTGGCGAACAAGATATTCATTACTTCCATGAAGGTAAGCA
TATATATGCATATGAATTTATGGGGGCTCACAAAGCATGTGAAGAAGGGATTGAAGGTATTAGATTTACAACATGGGCTC
CAAATGCGAAAAGTATTTGTGTTATAGGTGACTTTAACTATTGGCAAGTTGAAGATAAAAACTATATGGAACCTATCACT
GATGCTGGACTATGGAGTGTTTTTATCCCAAATGCAAAAAATGGTGATAAATATAAGTTTGTAGTAACTAATAAAGATAC
TAATCATTATGTCTATAAAAGCGACCCTTACGCTTTTTTCTCTGAACTAAGACCAAATACAGCTTCTATAATCACTACTG
AAACTCAATATACCTGGAGTGATGATAAATGGCTAGAAAAGCGCGCTAAAACTAACTACTATGATAACCCCATGAATGTT
TATGAGCTACATTTAGCCTCATGGAAAACTAAAAATGGTAAATTCTTGACATATGATGAGCTAAGTGAAACTCTACCTCA
ATATATCAAAGAAATGGGCTATACTCATGTTGAATTTATGCCGTTACACGAGCATCCCTTAGATGCTTCATGGGGCTATC
AACCTACTGGCTTTTATTCTGTAAATAGCCGTCATGGAGACATAATTGGCTTAAAGCGCCTAGTAGATAAGCTACACAAT
AATGACATAGGCGTAATTCTAGATTGGGTTCCAGGGCATTTCTGTAAAGATCAACATGGTTTAATATACTTTGATGGAAG
TCCATGTTATGAGTATCAAGAGCCTACAAAAGCAATCAACAAAGGTTGGGGAACACATAATTTTGACTTAGGCAGAAATG
AAGTAAAATGCTTTTTGATTTCAAATGCAATGTACTGGATTAATGAGTTTCATATAGACGGCTTACGTGTTGATGCAGTG
TCAAATATTCTTTATCTTAATTATGATAGAGAAGATGGTCAATGGATACCAAATATTTATGGCGGTCATGAAAACCTTGA
AGGTATAGCTTTTCTTAAAGAACTAAATGGAGTTCTAAAACACACCTGCAAAGGCGTTATTACTATTGCTGAAGAATCTT
CCTCTTGGCCAGATATTTCAACCCCCATTGAAAAAGGCGGGTTAGGATTTGACTTTAAATGGAATATGGGATGGATGAAT
GATACCTTAAGGTATATCTCGCTAGATCCGGTTTATCGTAAATATCATCATAACTTGATAACTTTTTCCATGGTCTATCA
TTATTCAGAAAAGTTTATTCTTTCGATCTCGCATGATGAGGTAGTTCATGGCAAGAAATCTTTGATTAATAAAATGTGGG
GAGACTTGTGGAATAAATATGCTGGACTACGTTTATATATGTCATATATGATTGGGCATCCTGGTAAAAAGCTTATTTTC
ATGGGTAGTGAGTTTGTCCAATTTGTCGAATGGCGCGAATACGAACAACTCCAATGGCAAGTAGTTGATCAATACGAATC
TCACAAACAAACTCTACATTTTTTCAAAAAATTAAATGATTTCTACCATAATGAAACTGCACTGTGGCAGTGTGACTATA
ATCATCATGGTTTCAGATGGATAGACGCTGATAACTCGCAGCAAAGTATCCTATCTTTTATTAGAAGTAGTAAAGATAAT
AAACAAAAGCTAATTTTTATTTGTAACTTCACTCCAGTTACATATTATGACTATCATTTAGGAGTACCAGATGCAGGATC
ATACAAAGAGGTATTTAACTCAGATAACCTTGAATTTGGTGGTTCTGGACAAGTTATGGCTACAGAGATTTTCTCGTCAC
CACAGTCATCACATGGATTTGAGCAAAGAATTACAATCAAAATCCCTCCTATGGCAACACTCGTACTCAAACTTATTAAA
TAA

Upstream 100 bases:

>100_bases
TGTAATCAATGAAATATTTAAAAATATTTACAGGCTAATGATTAAAGCTGTTTTATCAATAAGCTTTGGCATAGTCTAAA
ATTTTTGATTAGGAGCTTTT

Downstream 100 bases:

>100_bases
TCAAATTTTAATACAATAGAGATTTTATAGTTTATGCAAGCAACAAATCAAAATATATGGATACAAGATAAATTTGGTAA
TTTCACCCACCTTAATGCAA

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 640; Mature: 640

Protein sequence:

>640_residues
MKNKNSEQNTHSTIGEQDIHYFHEGKHIYAYEFMGAHKACEEGIEGIRFTTWAPNAKSICVIGDFNYWQVEDKNYMEPIT
DAGLWSVFIPNAKNGDKYKFVVTNKDTNHYVYKSDPYAFFSELRPNTASIITTETQYTWSDDKWLEKRAKTNYYDNPMNV
YELHLASWKTKNGKFLTYDELSETLPQYIKEMGYTHVEFMPLHEHPLDASWGYQPTGFYSVNSRHGDIIGLKRLVDKLHN
NDIGVILDWVPGHFCKDQHGLIYFDGSPCYEYQEPTKAINKGWGTHNFDLGRNEVKCFLISNAMYWINEFHIDGLRVDAV
SNILYLNYDREDGQWIPNIYGGHENLEGIAFLKELNGVLKHTCKGVITIAEESSSWPDISTPIEKGGLGFDFKWNMGWMN
DTLRYISLDPVYRKYHHNLITFSMVYHYSEKFILSISHDEVVHGKKSLINKMWGDLWNKYAGLRLYMSYMIGHPGKKLIF
MGSEFVQFVEWREYEQLQWQVVDQYESHKQTLHFFKKLNDFYHNETALWQCDYNHHGFRWIDADNSQQSILSFIRSSKDN
KQKLIFICNFTPVTYYDYHLGVPDAGSYKEVFNSDNLEFGGSGQVMATEIFSSPQSSHGFEQRITIKIPPMATLVLKLIK

Sequences:

>Translated_640_residues
MKNKNSEQNTHSTIGEQDIHYFHEGKHIYAYEFMGAHKACEEGIEGIRFTTWAPNAKSICVIGDFNYWQVEDKNYMEPIT
DAGLWSVFIPNAKNGDKYKFVVTNKDTNHYVYKSDPYAFFSELRPNTASIITTETQYTWSDDKWLEKRAKTNYYDNPMNV
YELHLASWKTKNGKFLTYDELSETLPQYIKEMGYTHVEFMPLHEHPLDASWGYQPTGFYSVNSRHGDIIGLKRLVDKLHN
NDIGVILDWVPGHFCKDQHGLIYFDGSPCYEYQEPTKAINKGWGTHNFDLGRNEVKCFLISNAMYWINEFHIDGLRVDAV
SNILYLNYDREDGQWIPNIYGGHENLEGIAFLKELNGVLKHTCKGVITIAEESSSWPDISTPIEKGGLGFDFKWNMGWMN
DTLRYISLDPVYRKYHHNLITFSMVYHYSEKFILSISHDEVVHGKKSLINKMWGDLWNKYAGLRLYMSYMIGHPGKKLIF
MGSEFVQFVEWREYEQLQWQVVDQYESHKQTLHFFKKLNDFYHNETALWQCDYNHHGFRWIDADNSQQSILSFIRSSKDN
KQKLIFICNFTPVTYYDYHLGVPDAGSYKEVFNSDNLEFGGSGQVMATEIFSSPQSSHGFEQRITIKIPPMATLVLKLIK
>Mature_640_residues
MKNKNSEQNTHSTIGEQDIHYFHEGKHIYAYEFMGAHKACEEGIEGIRFTTWAPNAKSICVIGDFNYWQVEDKNYMEPIT
DAGLWSVFIPNAKNGDKYKFVVTNKDTNHYVYKSDPYAFFSELRPNTASIITTETQYTWSDDKWLEKRAKTNYYDNPMNV
YELHLASWKTKNGKFLTYDELSETLPQYIKEMGYTHVEFMPLHEHPLDASWGYQPTGFYSVNSRHGDIIGLKRLVDKLHN
NDIGVILDWVPGHFCKDQHGLIYFDGSPCYEYQEPTKAINKGWGTHNFDLGRNEVKCFLISNAMYWINEFHIDGLRVDAV
SNILYLNYDREDGQWIPNIYGGHENLEGIAFLKELNGVLKHTCKGVITIAEESSSWPDISTPIEKGGLGFDFKWNMGWMN
DTLRYISLDPVYRKYHHNLITFSMVYHYSEKFILSISHDEVVHGKKSLINKMWGDLWNKYAGLRLYMSYMIGHPGKKLIF
MGSEFVQFVEWREYEQLQWQVVDQYESHKQTLHFFKKLNDFYHNETALWQCDYNHHGFRWIDADNSQQSILSFIRSSKDN
KQKLIFICNFTPVTYYDYHLGVPDAGSYKEVFNSDNLEFGGSGQVMATEIFSSPQSSHGFEQRITIKIPPMATLVLKLIK

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=660, Percent_Identity=27.7272727272727, Blast_Score=188, Evalue=1e-47,
Organism=Escherichia coli, GI1789839, Length=626, Percent_Identity=42.9712460063898, Blast_Score=566, Evalue=1e-162,
Organism=Caenorhabditis elegans, GI17554896, Length=650, Percent_Identity=26.9230769230769, Blast_Score=185, Evalue=8e-47,
Organism=Caenorhabditis elegans, GI32564391, Length=597, Percent_Identity=26.9681742043551, Blast_Score=166, Evalue=5e-41,
Organism=Saccharomyces cerevisiae, GI6320826, Length=665, Percent_Identity=26.1654135338346, Blast_Score=171, Evalue=3e-43,
Organism=Drosophila melanogaster, GI28573410, Length=648, Percent_Identity=25.9259259259259, Blast_Score=186, Evalue=4e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 74804; Mature: 74804

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKNSEQNTHSTIGEQDIHYFHEGKHIYAYEFMGAHKACEEGIEGIRFTTWAPNAKSIC
CCCCCCCCCHHHHCCCCHHHHEECCCEEEEEEECCHHHHHHHCCCCCEEEEECCCCCEEE
VIGDFNYWQVEDKNYMEPITDAGLWSVFIPNAKNGDKYKFVVTNKDTNHYVYKSDPYAFF
EEECCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCHHHH
SELRPNTASIITTETQYTWSDDKWLEKRAKTNYYDNPMNVYELHLASWKTKNGKFLTYDE
HHCCCCCEEEEEECCEEEECCHHHHHHHHCCCCCCCCCCEEEEEEEHEECCCCCEEEHHH
LSETLPQYIKEMGYTHVEFMPLHEHPLDASWGYQPTGFYSVNSRHGDIIGLKRLVDKLHN
HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCC
NDIGVILDWVPGHFCKDQHGLIYFDGSPCYEYQEPTKAINKGWGTHNFDLGRNEVKCFLI
CCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEE
SNAMYWINEFHIDGLRVDAVSNILYLNYDREDGQWIPNIYGGHENLEGIAFLKELNGVLK
ECCEEEEEEEEECCEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
HTCKGVITIAEESSSWPDISTPIEKGGLGFDFKWNMGWMNDTLRYISLDPVYRKYHHNLI
HCCCEEEEEEECCCCCCCCCCCHHHCCCCEEEEECCCCCCCCEEEEEECHHHHHHHCCEE
TFSMVYHYSEKFILSISHDEVVHGKKSLINKMWGDLWNKYAGLRLYMSYMIGHPGKKLIF
EEEEEEECCCEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
MGSEFVQFVEWREYEQLQWQVVDQYESHKQTLHFFKKLNDFYHNETALWQCDYNHHGFRW
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEE
IDADNSQQSILSFIRSSKDNKQKLIFICNFTPVTYYDYHLGVPDAGSYKEVFNSDNLEFG
EECCCCHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCHHHHHCCCCCEEC
GSGQVMATEIFSSPQSSHGFEQRITIKIPPMATLVLKLIK
CCCCEEEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHCC
>Mature Secondary Structure
MKNKNSEQNTHSTIGEQDIHYFHEGKHIYAYEFMGAHKACEEGIEGIRFTTWAPNAKSIC
CCCCCCCCCHHHHCCCCHHHHEECCCEEEEEEECCHHHHHHHCCCCCEEEEECCCCCEEE
VIGDFNYWQVEDKNYMEPITDAGLWSVFIPNAKNGDKYKFVVTNKDTNHYVYKSDPYAFF
EEECCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCHHHH
SELRPNTASIITTETQYTWSDDKWLEKRAKTNYYDNPMNVYELHLASWKTKNGKFLTYDE
HHCCCCCEEEEEECCEEEECCHHHHHHHHCCCCCCCCCCEEEEEEEHEECCCCCEEEHHH
LSETLPQYIKEMGYTHVEFMPLHEHPLDASWGYQPTGFYSVNSRHGDIIGLKRLVDKLHN
HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCC
NDIGVILDWVPGHFCKDQHGLIYFDGSPCYEYQEPTKAINKGWGTHNFDLGRNEVKCFLI
CCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEE
SNAMYWINEFHIDGLRVDAVSNILYLNYDREDGQWIPNIYGGHENLEGIAFLKELNGVLK
ECCEEEEEEEEECCEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
HTCKGVITIAEESSSWPDISTPIEKGGLGFDFKWNMGWMNDTLRYISLDPVYRKYHHNLI
HCCCEEEEEEECCCCCCCCCCCHHHCCCCEEEEECCCCCCCCEEEEEECHHHHHHHCCEE
TFSMVYHYSEKFILSISHDEVVHGKKSLINKMWGDLWNKYAGLRLYMSYMIGHPGKKLIF
EEEEEEECCCEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
MGSEFVQFVEWREYEQLQWQVVDQYESHKQTLHFFKKLNDFYHNETALWQCDYNHHGFRW
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEE
IDADNSQQSILSFIRSSKDNKQKLIFICNFTPVTYYDYHLGVPDAGSYKEVFNSDNLEFG
EECCCCHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCHHHHHCCCCCEEC
GSGQVMATEIFSSPQSSHGFEQRITIKIPPMATLVLKLIK
CCCCEEEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA