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The map label for this gene is ynaI [H]

Identifier: 134302447

GI number: 134302447

Start: 1498768

End: 1499700

Strand: Reverse

Name: ynaI [H]

Synonym: FTW_1595

Alternate gene names: 134302447

Gene position: 1499700-1498768 (Counterclockwise)

Preceding gene: 134302448

Following gene: 134302441

Centisome position: 78.99

GC content: 29.37

Gene sequence:

>933_bases
TTGGTTATTTGGTCGTATTTTATAAAAACTTGTGTTGACTTACCTGTTATAGTTCATCTGCCTGATTATAAAGAAGTTAT
AGTATCATATTCGGATAAAATTTTTGATTTTTGTATTTATTTAGCAATTATTATTAGTTTATTTAGGTTTCTATATAAAA
GTAAAAATATTGCTATCGAAAAGAAAAAAGCTGTAACAAAAGATGGTTATGATGATTTTAGAGATATCAATGCTATATTT
AAAGCTTTAGAGCTTGGAGCTATAGTAGTTTCAGTTATATTGATTTTGGCAGCTTTTCGTGTTCCTCTTACTGCTTTAGG
AGCTTTCAGTGGTGTTGCCTTGGCTGGTTTAACTCTTTCGCAAAGTACTCTGTTGACAAATCTATTTGGAGGCTTGTTTG
TAGTATTTAATCGTAAATATTCTGAGGGCGATATTATTTCTTCAGAGATAAATTCGACAATTAAATTTAGTGGTACTATC
AAAAAAATTGGTACCTTAACTACTAGAGTTGATAATTCTGAAACAGCACCAATGCATATTCCAAATTCGGTGTTTCTTAA
TACTTGTATAACAACAACATCACGTCGAACTCATAGGCGCATAGTACAGTTTATAACTATTGATTATAAACATATTGATA
AAATCCCTGTTATTAAACAAAAGCTTTTAGAGATACTTAAATCACATCCAAATATTGACCAGAATAAAACTTTAGCTGTC
TCATTAGCATCAGGAGGTACCAATATTTCTGGTAAGCTAGAGGGTAGTTTTGGTAGTAGTGGTATTAATATACAAATTTA
TGCGATGGTTAATAAAGTTTTCTTTAGTGACTTTATCAATGTTCAGGATGAAATTTTTATAAATATTGCCAAAGAATTAA
ATGATTTAGATATAGAGTTTGCGATAAATCAAGTTACGTTACATAAATATTAG

Upstream 100 bases:

>100_bases
TCTTAGTGTTATTATATCTTTACTAGGAAGCCTTTTAGTAATTAAGCATAAAGATACAATTAGATATTCATTCGTAAAAT
CATTTAAACTTACTCTTTAT

Downstream 100 bases:

>100_bases
TAATCTAATCTAAGATAGTTAGATTTTTTATATTGCTAATACCCTCTAAACTCATAAGTAGCCTATCAAATCCTAAAGCA
ACTCCAGAACATTCAGGAAT

Product: small conductance mechanosensitive ion channel protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MVIWSYFIKTCVDLPVIVHLPDYKEVIVSYSDKIFDFCIYLAIIISLFRFLYKSKNIAIEKKKAVTKDGYDDFRDINAIF
KALELGAIVVSVILILAAFRVPLTALGAFSGVALAGLTLSQSTLLTNLFGGLFVVFNRKYSEGDIISSEINSTIKFSGTI
KKIGTLTTRVDNSETAPMHIPNSVFLNTCITTTSRRTHRRIVQFITIDYKHIDKIPVIKQKLLEILKSHPNIDQNKTLAV
SLASGGTNISGKLEGSFGSSGINIQIYAMVNKVFFSDFINVQDEIFINIAKELNDLDIEFAINQVTLHKY

Sequences:

>Translated_310_residues
MVIWSYFIKTCVDLPVIVHLPDYKEVIVSYSDKIFDFCIYLAIIISLFRFLYKSKNIAIEKKKAVTKDGYDDFRDINAIF
KALELGAIVVSVILILAAFRVPLTALGAFSGVALAGLTLSQSTLLTNLFGGLFVVFNRKYSEGDIISSEINSTIKFSGTI
KKIGTLTTRVDNSETAPMHIPNSVFLNTCITTTSRRTHRRIVQFITIDYKHIDKIPVIKQKLLEILKSHPNIDQNKTLAV
SLASGGTNISGKLEGSFGSSGINIQIYAMVNKVFFSDFINVQDEIFINIAKELNDLDIEFAINQVTLHKY
>Mature_310_residues
MVIWSYFIKTCVDLPVIVHLPDYKEVIVSYSDKIFDFCIYLAIIISLFRFLYKSKNIAIEKKKAVTKDGYDDFRDINAIF
KALELGAIVVSVILILAAFRVPLTALGAFSGVALAGLTLSQSTLLTNLFGGLFVVFNRKYSEGDIISSEINSTIKFSGTI
KKIGTLTTRVDNSETAPMHIPNSVFLNTCITTTSRRTHRRIVQFITIDYKHIDKIPVIKQKLLEILKSHPNIDQNKTLAV
SLASGGTNISGKLEGSFGSSGINIQIYAMVNKVFFSDFINVQDEIFINIAKELNDLDIEFAINQVTLHKY

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=238, Percent_Identity=27.7310924369748, Blast_Score=107, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 34635; Mature: 34635

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIWSYFIKTCVDLPVIVHLPDYKEVIVSYSDKIFDFCIYLAIIISLFRFLYKSKNIAIE
CEEHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
KKKAVTKDGYDDFRDINAIFKALELGAIVVSVILILAAFRVPLTALGAFSGVALAGLTLS
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
QSTLLTNLFGGLFVVFNRKYSEGDIISSEINSTIKFSGTIKKIGTLTTRVDNSETAPMHI
HHHHHHHHHHHHEEEEECCCCCCCEEHHHCCCEEEECCHHHHHHHHHEECCCCCCCCEEC
PNSVFLNTCITTTSRRTHRRIVQFITIDYKHIDKIPVIKQKLLEILKSHPNIDQNKTLAV
CCHHHHHHHHHCCCHHHHHHHHHHHEECHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEE
SLASGGTNISGKLEGSFGSSGINIQIYAMVNKVFFSDFINVQDEIFINIAKELNDLDIEF
EEECCCCCCCEEEECCCCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEE
AINQVTLHKY
EEEEEEEECC
>Mature Secondary Structure
MVIWSYFIKTCVDLPVIVHLPDYKEVIVSYSDKIFDFCIYLAIIISLFRFLYKSKNIAIE
CEEHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
KKKAVTKDGYDDFRDINAIFKALELGAIVVSVILILAAFRVPLTALGAFSGVALAGLTLS
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
QSTLLTNLFGGLFVVFNRKYSEGDIISSEINSTIKFSGTIKKIGTLTTRVDNSETAPMHI
HHHHHHHHHHHHEEEEECCCCCCCEEHHHCCCEEEECCHHHHHHHHHEECCCCCCCCEEC
PNSVFLNTCITTTSRRTHRRIVQFITIDYKHIDKIPVIKQKLLEILKSHPNIDQNKTLAV
CCHHHHHHHHHCCCHHHHHHHHHHHEECHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEE
SLASGGTNISGKLEGSFGSSGINIQIYAMVNKVFFSDFINVQDEIFINIAKELNDLDIEF
EEECCCCCCCEEEECCCCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEE
AINQVTLHKY
EEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]