Click here to switch to the map view.

The map label for this gene is ydiK [C]

Identifier: 134302427

GI number: 134302427

Start: 1470954

End: 1471979

Strand: Direct

Name: ydiK [C]

Synonym: FTW_1565

Alternate gene names: 134302427

Gene position: 1470954-1471979 (Clockwise)

Preceding gene: 134302426

Following gene: 134302430

Centisome position: 77.48

GC content: 29.73

Gene sequence:

>1026_bases
ATGACTTCTTATACCAATATCAAAAAATTAAGCATTATATGTTTAGTCGGCGCGCTAATTGGATGGGTTTTATATCCTTT
TATCTATCCTATTTTATTTGCTGGATTACTTGCGATAATTCTTGCACCACTACAGTTATATTTAGAGCAGCATATTGGTA
GACATAAAAGTAGTTTTATAATTGTGATTGCTATCTTATTATGTATTTTTATACCCTTACTTATTGTATTATCTTATGTG
ATTACAGAGATTATTTCATATTTACAGCATAGTGAATCTCTATCTCAAACTTTTTCACAATTAAGCAAATCAATAGCAAA
TATTCCTTATATCGGCAGTACTCTTCAAGAGCATTTTGATAACCTTCTCAACATGGTTAATCAAGATAAAGATATGATAA
TTTCTAACCTTGGAAAAATATTACCAACAATAAGATATATAGGCTTCACATCAGTAAGTCTCCTAACTGATTTCTTGATA
ACGCTTTTACTAGTCTACCAATTTTTAGTAAGCAGCACTAGTTTAGAAAAATTTCTCAAAAAAATTATACTAAAAGATTT
TCACGACAGCGATAGTTTTATATCAGCAGCTATTGCAACAACTCGAAGAGTTAGTTTAGCAATATTTCTCACAGCAATGC
TTGTCGGAACTATGATGACAATTACTTTCTCTATGGTGGGTATACCAAGCCCTATTTTATTTGGATTTATCGCTGCTATT
GCTTCAATGGTTCCATTTATGGTTGGTATAATTTATATTTTAATTGGCGCAAGTGTATTTGTTATATATGGTGCAACAAA
AGCTATTATTATTTTGATTATTGGTTTTAGCCTAAATATTTTTACAGATAATATTATGCAGCCAAAAATTATTAACAAAC
AAGTTAAACTTAGCTTTGTTGCCTCACTAATAGGTATCATGGGAGGTATTCATGCTTTTGGTTTTATCGGAATATTTCTT
GGTCCAGTAATATTTAATGTGGCTTTTGTAGGTATTGAAAAACTAATGAATAACCAAGAATATTAA

Upstream 100 bases:

>100_bases
CAACAGCAATAACTAAATTGATAACATAAACTTTAATAATAAAAATTAAACTGTTATTCTTAGGCAAGAGTATAAACTTC
ACTAATTGTTGTTATTTAAA

Downstream 100 bases:

>100_bases
AAGCCAAATCACAAAATATTTGTAGCAACTTATTAAACAAAAAATTTTGCCTAAATCTAACTCTTCTTAAACATATTAAA
GCAAGCAATTTAAATTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MTSYTNIKKLSIICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHKSSFIIVIAILLCIFIPLLIVLSYV
ITEIISYLQHSESLSQTFSQLSKSIANIPYIGSTLQEHFDNLLNMVNQDKDMIISNLGKILPTIRYIGFTSVSLLTDFLI
TLLLVYQFLVSSTSLEKFLKKIILKDFHDSDSFISAAIATTRRVSLAIFLTAMLVGTMMTITFSMVGIPSPILFGFIAAI
ASMVPFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLIGIMGGIHAFGFIGIFL
GPVIFNVAFVGIEKLMNNQEY

Sequences:

>Translated_341_residues
MTSYTNIKKLSIICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHKSSFIIVIAILLCIFIPLLIVLSYV
ITEIISYLQHSESLSQTFSQLSKSIANIPYIGSTLQEHFDNLLNMVNQDKDMIISNLGKILPTIRYIGFTSVSLLTDFLI
TLLLVYQFLVSSTSLEKFLKKIILKDFHDSDSFISAAIATTRRVSLAIFLTAMLVGTMMTITFSMVGIPSPILFGFIAAI
ASMVPFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLIGIMGGIHAFGFIGIFL
GPVIFNVAFVGIEKLMNNQEY
>Mature_340_residues
TSYTNIKKLSIICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHKSSFIIVIAILLCIFIPLLIVLSYVI
TEIISYLQHSESLSQTFSQLSKSIANIPYIGSTLQEHFDNLLNMVNQDKDMIISNLGKILPTIRYIGFTSVSLLTDFLIT
LLLVYQFLVSSTSLEKFLKKIILKDFHDSDSFISAAIATTRRVSLAIFLTAMLVGTMMTITFSMVGIPSPILFGFIAAIA
SMVPFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLIGIMGGIHAFGFIGIFLG
PVIFNVAFVGIEKLMNNQEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=325, Percent_Identity=23.3846153846154, Blast_Score=76, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 37714; Mature: 37583

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSYTNIKKLSIICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHKSSFI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
IVIAILLCIFIPLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIPYIGSTLQEHFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
NLLNMVNQDKDMIISNLGKILPTIRYIGFTSVSLLTDFLITLLLVYQFLVSSTSLEKFLK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KIILKDFHDSDSFISAAIATTRRVSLAIFLTAMLVGTMMTITFSMVGIPSPILFGFIAAI
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ASMVPFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ASLIGIMGGIHAFGFIGIFLGPVIFNVAFVGIEKLMNNQEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TSYTNIKKLSIICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHKSSFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
IVIAILLCIFIPLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIPYIGSTLQEHFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
NLLNMVNQDKDMIISNLGKILPTIRYIGFTSVSLLTDFLITLLLVYQFLVSSTSLEKFLK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KIILKDFHDSDSFISAAIATTRRVSLAIFLTAMLVGTMMTITFSMVGIPSPILFGFIAAI
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ASMVPFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ASLIGIMGGIHAFGFIGIFLGPVIFNVAFVGIEKLMNNQEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]