Click here to switch to the map view.

The map label for this gene is 134302289

Identifier: 134302289

GI number: 134302289

Start: 1298838

End: 1299641

Strand: Reverse

Name: 134302289

Synonym: FTW_1387

Alternate gene names: NA

Gene position: 1299641-1298838 (Counterclockwise)

Preceding gene: 134302291

Following gene: 134302288

Centisome position: 68.46

GC content: 32.46

Gene sequence:

>804_bases
ATGTTTTTTATAATACCATTTATTTATTACTCCGACTCCTATTCTAATCTAAATTCTCAGCTAATAAGTATAGCTGCAGA
TGGCACAACTTCGACTATAGGTAATTTAAACTTTAATCAAAATAATATTTATAGAGAGTTTACAGATAATCTAGATACAA
CAGCCTTTAATGGCATGATGAACATGGCTGGTATTGGTGAGGTTAGAGATTTACAAGAAGCAGCTACACAAAATCAAAAT
CTTGCTGATTTATTAGATAAGATGAATACAGAAAGTTATACAGCTAAATTAGGTTTAGCCGATGACTTATTAACAGAGTG
GACAAAGACATCAAATTTCTCAGATACAAATAATCTTGAGAATATAACCTTAGAAGATGGTACAAGCTTTACATTTAATA
TATCCGACTCTACAAGAAGCCAATTAGACAAGATTCAGACATTAGAAACATTCTCATCAAATAAGCTTATTCAAACAAGT
ATAGATGGAGATACATTAACCATCACTCATGGTAGTAAAAGCAGAAGCTATAACATAGTTCGAGGTCAGGAGAATGTATT
AGGAGATAGTTATTTCACAGCTGGTTGGAATGAGTATACAGTAGGCAATACAGTCCTTAGAGATATGAACTTAACAAGTG
TAGCTAATGGCTATAACTCTATATTAAACACAGTCAAAGAAAATATCTTCGCTCAAACTGAGTATCCACAAATATTAGAG
AACATTGGTTTTGACTATAATGCTGAGAGTGGTGAGATTGGACTTAATTTTGATGGGGTGAATGAGTTTAGGAGAGTTGC
ATAA

Upstream 100 bases:

>100_bases
ATTAAATTAATTAAGGTTTAATTTAAAGAACAAATTGAAATTATTTTTTGTATGATATATGTTTGAATTATTAGTTGTTC
AAACTGGTATCTTATAGTTT

Downstream 100 bases:

>100_bases
TGAAAAAAACAGAAGATCAATATTATAAAAAGCTTTGGACAAAGAATTGGGAGGGGAGTTGGCTCCTTAGGAAAGATAAA
TATCTCTTAAAATATGCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MFFIIPFIYYSDSYSNLNSQLISIAADGTTSTIGNLNFNQNNIYREFTDNLDTTAFNGMMNMAGIGEVRDLQEAATQNQN
LADLLDKMNTESYTAKLGLADDLLTEWTKTSNFSDTNNLENITLEDGTSFTFNISDSTRSQLDKIQTLETFSSNKLIQTS
IDGDTLTITHGSKSRSYNIVRGQENVLGDSYFTAGWNEYTVGNTVLRDMNLTSVANGYNSILNTVKENIFAQTEYPQILE
NIGFDYNAESGEIGLNFDGVNEFRRVA

Sequences:

>Translated_267_residues
MFFIIPFIYYSDSYSNLNSQLISIAADGTTSTIGNLNFNQNNIYREFTDNLDTTAFNGMMNMAGIGEVRDLQEAATQNQN
LADLLDKMNTESYTAKLGLADDLLTEWTKTSNFSDTNNLENITLEDGTSFTFNISDSTRSQLDKIQTLETFSSNKLIQTS
IDGDTLTITHGSKSRSYNIVRGQENVLGDSYFTAGWNEYTVGNTVLRDMNLTSVANGYNSILNTVKENIFAQTEYPQILE
NIGFDYNAESGEIGLNFDGVNEFRRVA
>Mature_267_residues
MFFIIPFIYYSDSYSNLNSQLISIAADGTTSTIGNLNFNQNNIYREFTDNLDTTAFNGMMNMAGIGEVRDLQEAATQNQN
LADLLDKMNTESYTAKLGLADDLLTEWTKTSNFSDTNNLENITLEDGTSFTFNISDSTRSQLDKIQTLETFSSNKLIQTS
IDGDTLTITHGSKSRSYNIVRGQENVLGDSYFTAGWNEYTVGNTVLRDMNLTSVANGYNSILNTVKENIFAQTEYPQILE
NIGFDYNAESGEIGLNFDGVNEFRRVA

Specific function: Unknown

COG id: COG2931

COG function: function code Q; RTX toxins and related Ca2+-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29800; Mature: 29800

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFIIPFIYYSDSYSNLNSQLISIAADGTTSTIGNLNFNQNNIYREFTDNLDTTAFNGMM
CEEEEEEEEECCCCCCCCCEEEEEEECCCCCEEECCCCCCCCHHHHHHCCCCHHHHHCCH
NMAGIGEVRDLQEAATQNQNLADLLDKMNTESYTAKLGLADDLLTEWTKTSNFSDTNNLE
HHCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHEEECCCHHHHHHHHHHCCCCCCCCCCC
NITLEDGTSFTFNISDSTRSQLDKIQTLETFSSNKLIQTSIDGDTLTITHGSKSRSYNIV
EEEEECCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCEEEE
RGQENVLGDSYFTAGWNEYTVGNTVLRDMNLTSVANGYNSILNTVKENIFAQTEYPQILE
ECCCHHCCCCEEECCCCCEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
NIGFDYNAESGEIGLNFDGVNEFRRVA
HCCCCCCCCCCCEEEEECCHHHHHHCC
>Mature Secondary Structure
MFFIIPFIYYSDSYSNLNSQLISIAADGTTSTIGNLNFNQNNIYREFTDNLDTTAFNGMM
CEEEEEEEEECCCCCCCCCEEEEEEECCCCCEEECCCCCCCCHHHHHHCCCCHHHHHCCH
NMAGIGEVRDLQEAATQNQNLADLLDKMNTESYTAKLGLADDLLTEWTKTSNFSDTNNLE
HHCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHEEECCCHHHHHHHHHHCCCCCCCCCCC
NITLEDGTSFTFNISDSTRSQLDKIQTLETFSSNKLIQTSIDGDTLTITHGSKSRSYNIV
EEEEECCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCEEEE
RGQENVLGDSYFTAGWNEYTVGNTVLRDMNLTSVANGYNSILNTVKENIFAQTEYPQILE
ECCCHHCCCCEEECCCCCEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
NIGFDYNAESGEIGLNFDGVNEFRRVA
HCCCCCCCCCCCEEEEECCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA