| Definition | Francisella tularensis subsp. tularensis WY96-3418, complete genome. |
|---|---|
| Accession | NC_009257 |
| Length | 1,898,476 |
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The map label for this gene is 134302147
Identifier: 134302147
GI number: 134302147
Start: 1132719
End: 1133282
Strand: Reverse
Name: 134302147
Synonym: FTW_1198
Alternate gene names: NA
Gene position: 1133282-1132719 (Counterclockwise)
Preceding gene: 134302148
Following gene: 134302146
Centisome position: 59.69
GC content: 31.91
Gene sequence:
>564_bases ATGAAAGATCTTAATTTTATACGCGGTAGATGGCGAAAAAAACAACTAACATACCTTGGCATAGATCTTGGCTTTATGGC TTTAGTTGCTTTTATATCAATGTTTGTTTTGTCGATAATATTTTCTTGGTCTAGTGAAGAGGATATGAAGGTTGAAAATT ATATACAAACGCAAATCACTAAACTTAATAGTCAAGTAGCTGAGTACGCAGCAGTCAAAACGCAAAGAGACAAGCTATTG GATATGTCAACAGACTTGGCAAATATTAAAGCTAGTCAGTACTATATCTTACTAGGCATAGAAAAAATTTCACGCGCGAT TACGGATCAGCTTTATATCACGAATATTAACTATGTATATAGTTCTGATACGCTGATTCTTACTGGAGAAGTTAAAGATT TAAAACTTCTTTCAATATTTATGAAGAATCTAGAAATAGAATTTAGAGTAAAAAAAGTCGAACTTAAAAATTTAGGTTCA GAGAAAAATGGTCAAAGAAGTTTCTCTTTAGAATTTAAATTTGGAGAGGGTAACGCATTTAAGGGAGAGAGTGTTAAATG GTAG
Upstream 100 bases:
>100_bases AATCCATTTGTAAATATTGATATTGAGAAATATGGTGATATAGAGAAACCTTATCGTTATGTTTTGCCTATAGCAATAGC TATGAGAGAGGCATTGTGAT
Downstream 100 bases:
>100_bases ATAAAATCCAGAGCTTTTTATCTAGTAAGCACATCAATAAGATTATAAATGCACCCATAAAGATTAGACTACCAATAATG ATTGCGGTATTTGGATTATT
Product: Type IV pili associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MKDLNFIRGRWRKKQLTYLGIDLGFMALVAFISMFVLSIIFSWSSEEDMKVENYIQTQITKLNSQVAEYAAVKTQRDKLL DMSTDLANIKASQYYILLGIEKISRAITDQLYITNINYVYSSDTLILTGEVKDLKLLSIFMKNLEIEFRVKKVELKNLGS EKNGQRSFSLEFKFGEGNAFKGESVKW
Sequences:
>Translated_187_residues MKDLNFIRGRWRKKQLTYLGIDLGFMALVAFISMFVLSIIFSWSSEEDMKVENYIQTQITKLNSQVAEYAAVKTQRDKLL DMSTDLANIKASQYYILLGIEKISRAITDQLYITNINYVYSSDTLILTGEVKDLKLLSIFMKNLEIEFRVKKVELKNLGS EKNGQRSFSLEFKFGEGNAFKGESVKW >Mature_187_residues MKDLNFIRGRWRKKQLTYLGIDLGFMALVAFISMFVLSIIFSWSSEEDMKVENYIQTQITKLNSQVAEYAAVKTQRDKLL DMSTDLANIKASQYYILLGIEKISRAITDQLYITNINYVYSSDTLILTGEVKDLKLLSIFMKNLEIEFRVKKVELKNLGS EKNGQRSFSLEFKFGEGNAFKGESVKW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21615; Mature: 21615
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS00037 MYB_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDLNFIRGRWRKKQLTYLGIDLGFMALVAFISMFVLSIIFSWSSEEDMKVENYIQTQIT CCCCHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH KLNSQVAEYAAVKTQRDKLLDMSTDLANIKASQYYILLGIEKISRAITDQLYITNINYVY HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEHHHHHHHHHCEEEEEEEEEEE SSDTLILTGEVKDLKLLSIFMKNLEIEFRVKKVELKNLGSEKNGQRSFSLEFKFGEGNAF ECCEEEEECCCCHHHHHHHHHHCCEEEEEEEEEEHHHCCCCCCCCEEEEEEEEECCCCCC KGESVKW CCCCCCC >Mature Secondary Structure MKDLNFIRGRWRKKQLTYLGIDLGFMALVAFISMFVLSIIFSWSSEEDMKVENYIQTQIT CCCCHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH KLNSQVAEYAAVKTQRDKLLDMSTDLANIKASQYYILLGIEKISRAITDQLYITNINYVY HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEHHHHHHHHHCEEEEEEEEEEE SSDTLILTGEVKDLKLLSIFMKNLEIEFRVKKVELKNLGSEKNGQRSFSLEFKFGEGNAF ECCEEEEECCCCHHHHHHHHHHCCEEEEEEEEEEHHHCCCCCCCCEEEEEEEEECCCCCC KGESVKW CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA